RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 ASPSCR1Q9BZE9 553 aa11.9□□□□□ -0.5
PTCH1-208ENST00000430669 GPR63Q9BZJ6 419 aa11.9□□□□□ -0.5
PTCH1-208ENST00000430669 SMYD3Q9H7B4 428 aa11.9□□□□□ -0.5
PTCH1-208ENST00000430669 BNIP3LO60238 219 aa11.9□□□□□ -0.5
PTCH1-208ENST00000430669 PPFIA2O75334 1257 aa11.9□□□□□ -0.5
PTCH1-208ENST00000430669 TRPA1O75762 1119 aa11.9□□□□□ -0.5
PTCH1-208ENST00000430669 PCSK7Q16549 785 aa11.9□□□□□ -0.5
PTCH1-208ENST00000430669 SLC13A4Q9UKG4 626 aa11.9□□□□□ -0.5
PTCH1-208ENST00000430669 ADCY6O43306 1168 aa11.9□□□□□ -0.5
PTCH1-208ENST00000430669 KDELR1P24390 212 aa11.9□□□□□ -0.5
PTCH1-208ENST00000430669 SLC45A4Q5BKX6 768 aa11.9□□□□□ -0.5
PTCH1-208ENST00000430669 MAP1SQ66K74 1059 aaPredicted RBP11.9□□□□□ -0.5
PTCH1-208ENST00000430669 ZNF467Q7Z7K2 595 aaPredicted RBP11.9□□□□□ -0.5
PTCH1-208ENST00000430669 SUGP1Q8IWZ8 645 aaKnown RBP11.9□□□□□ -0.5
PTCH1-208ENST00000430669 FAM9CQ8IZT9 166 aa11.9□□□□□ -0.5
PTCH1-208ENST00000430669 HTR3CQ8WXA8 447 aa11.9□□□□□ -0.5
PTCH1-208ENST00000430669 KCNK16Q96T55 309 aa11.9□□□□□ -0.5
PTCH1-208ENST00000430669 ILKAPQ9H0C8 392 aaPredicted RBP11.9□□□□□ -0.5
PTCH1-208ENST00000430669 CHORDC1Q9UHD1 332 aaPredicted RBP11.9□□□□□ -0.5
PTCH1-208ENST00000430669 CASTOR2A6NHX0 329 aa11.9□□□□□ -0.5
PTCH1-208ENST00000430669 PGAM1P18669 254 aa11.9□□□□□ -0.5
PTCH1-208ENST00000430669 CYP3A5P20815 502 aa11.9□□□□□ -0.5
PTCH1-208ENST00000430669 GRK2P25098 689 aa11.9□□□□□ -0.5
PTCH1-208ENST00000430669 NPY5RQ15761 445 aa11.9□□□□□ -0.5
PTCH1-208ENST00000430669 C4orf33Q8N1A6 199 aa11.9□□□□□ -0.5
PTCH1-208ENST00000430669 TOP6BLQ8N6T0 577 aa11.9□□□□□ -0.5
PTCH1-208ENST00000430669 EPS8L3Q8TE67 593 aaKnown RBP11.9□□□□□ -0.5
PTCH1-208ENST00000430669 SRPK1Q96SB4 655 aaKnown RBP11.9□□□□□ -0.5
PTCH1-208ENST00000430669 GPR20Q99678 358 aa11.9□□□□□ -0.5
PTCH1-208ENST00000430669 MORF4L1Q9UBU8 362 aa11.9□□□□□ -0.5
PTCH1-208ENST00000430669 KDM1AO60341 852 aa11.9□□□□□ -0.51
PTCH1-208ENST00000430669 HIST1H2AGP0C0S8 130 aaPredicted RBP11.9□□□□□ -0.51
PTCH1-208ENST00000430669 HIST1H2ADP20671 130 aa11.9□□□□□ -0.51
PTCH1-208ENST00000430669 NPY2RP49146 381 aa11.9□□□□□ -0.51
PTCH1-208ENST00000430669 FMO1Q01740 532 aa11.9□□□□□ -0.51
PTCH1-208ENST00000430669 ZBTB45Q96K62 511 aaPredicted RBP11.9□□□□□ -0.51
PTCH1-208ENST00000430669 HIST1H2AHQ96KK5 128 aa11.9□□□□□ -0.51
PTCH1-208ENST00000430669 YME1L1Q96TA2 773 aa11.9□□□□□ -0.51
PTCH1-208ENST00000430669 HIST1H2AJQ99878 128 aa11.9□□□□□ -0.51
PTCH1-208ENST00000430669 H2AFJQ9BTM1 129 aa11.9□□□□□ -0.51
PTCH1-208ENST00000430669 ACTL7BQ9Y614 415 aa11.9□□□□□ -0.51
PTCH1-208ENST00000430669 PGM1P36871 562 aa11.89□□□□□ -0.51
PTCH1-208ENST00000430669 TUFMP49411 452 aaKnown RBP11.89□□□□□ -0.51
PTCH1-208ENST00000430669 COL9A3Q14050 684 aaPredicted RBP11.89□□□□□ -0.51
PTCH1-208ENST00000430669 B3GALNT2Q8NCR0 500 aa11.89□□□□□ -0.51
PTCH1-208ENST00000430669 TRPM5Q9NZQ8 1165 aa11.89□□□□□ -0.51
PTCH1-208ENST00000430669 ZNF541Q9H0D2 1346 aa11.89□□□□□ -0.51
PTCH1-208ENST00000430669 FZD9O00144 591 aa11.89□□□□□ -0.51
PTCH1-208ENST00000430669 AKAP5P24588 427 aa11.89□□□□□ -0.51
PTCH1-208ENST00000430669 SYTL3Q4VX76 610 aa11.89□□□□□ -0.51
PTCH1-208ENST00000430669 ZCWPW2Q504Y3 356 aa11.89□□□□□ -0.51
PTCH1-208ENST00000430669 ANKRD52Q8NB46 1076 aa11.89□□□□□ -0.51
PTCH1-208ENST00000430669 OR2W6PQ8NHA6 318 aa11.89□□□□□ -0.51
PTCH1-208ENST00000430669 DNAJC18Q9H819 358 aa11.89□□□□□ -0.51
PTCH1-208ENST00000430669 ADA2Q9NZK5 511 aa11.89□□□□□ -0.51
PTCH1-208ENST00000430669 DOCK5Q9H7D0 1870 aa11.89□□□□□ -0.51
PTCH1-208ENST00000430669 DNAJC8O75937 253 aaPredicted RBP11.89□□□□□ -0.51
PTCH1-208ENST00000430669 PARNO95453 639 aaKnown RBP11.89□□□□□ -0.51
PTCH1-208ENST00000430669 YY1P25490 414 aa11.89□□□□□ -0.51
PTCH1-208ENST00000430669 HMOX2P30519 316 aa11.89□□□□□ -0.51
PTCH1-208ENST00000430669 LRRC49Q8IUZ0 686 aa11.89□□□□□ -0.51
PTCH1-208ENST00000430669 MRPS31Q92665 395 aaKnown RBP11.89□□□□□ -0.51
PTCH1-208ENST00000430669 TEX12Q9BXU0 123 aa11.89□□□□□ -0.51
PTCH1-208ENST00000430669 MIPP30301 263 aa11.89□□□□□ -0.51
PTCH1-208ENST00000430669 RPL21P46778 160 aaKnown RBP11.89□□□□□ -0.51
PTCH1-208ENST00000430669 TMTC4Q5T4D3 741 aa11.89□□□□□ -0.51
PTCH1-208ENST00000430669 SLC2A14Q8TDB8 520 aa11.89□□□□□ -0.51
PTCH1-208ENST00000430669 PAFAH2Q99487 392 aa11.89□□□□□ -0.51
PTCH1-208ENST00000430669 IL22Q9GZX6 179 aa11.89□□□□□ -0.51
PTCH1-208ENST00000430669 HADHBP55084 474 aaKnown RBP11.89□□□□□ -0.51
PTCH1-208ENST00000430669 ORC1Q13415 861 aa11.89□□□□□ -0.51
PTCH1-208ENST00000430669 INPP5AQ14642 412 aa11.89□□□□□ -0.51
PTCH1-208ENST00000430669 SPDYE1Q8NFV5 336 aaPredicted RBP11.89□□□□□ -0.51
PTCH1-208ENST00000430669 SEZ6LQ9BYH1 1024 aa11.89□□□□□ -0.51
PTCH1-208ENST00000430669 THSD7AQ9UPZ6 1657 aa11.89□□□□□ -0.51
PTCH1-208ENST00000430669 TRIM49D1C9J1S8 452 aa11.89□□□□□ -0.51
PTCH1-208ENST00000430669 ZNF197O14709 1029 aa11.89□□□□□ -0.51
PTCH1-208ENST00000430669 TRUB2O95900 331 aaKnown RBP11.89□□□□□ -0.51
PTCH1-208ENST00000430669 CCDC130P13994 396 aa11.89□□□□□ -0.51
PTCH1-208ENST00000430669 IL10P22301 178 aa11.89□□□□□ -0.51
PTCH1-208ENST00000430669 CDH17Q12864 832 aa11.89□□□□□ -0.51
PTCH1-208ENST00000430669 TTYH3Q9C0H2 523 aa11.89□□□□□ -0.51
PTCH1-208ENST00000430669 SMCHD1A6NHR9 2005 aa11.89□□□□□ -0.51
PTCH1-208ENST00000430669 SF3B1O75533 1304 aaKnown RBP eCLIP11.89□□□□□ -0.514e-7■■■■■ 133.7
PTCH1-208ENST00000430669 SOAT2O75908 522 aa11.89□□□□□ -0.51
PTCH1-208ENST00000430669 AMHP03971 560 aa11.89□□□□□ -0.51
PTCH1-208ENST00000430669 SCUBE3Q8IX30 993 aa11.89□□□□□ -0.51
PTCH1-208ENST00000430669 RASGEF1CQ8N431 466 aa11.89□□□□□ -0.51
PTCH1-208ENST00000430669 PGM2Q96G03 612 aa11.89□□□□□ -0.51
PTCH1-208ENST00000430669 FAM118BQ9BPY3 351 aa11.89□□□□□ -0.51
PTCH1-208ENST00000430669 RIC8BQ9NVN3 520 aa11.89□□□□□ -0.51
PTCH1-208ENST00000430669 MIA3Q5JRA6 1907 aa11.88□□□□□ -0.51
PTCH1-208ENST00000430669 NFICP08651 508 aa11.88□□□□□ -0.51
PTCH1-208ENST00000430669 CRABP2P29373 138 aa11.88□□□□□ -0.51
PTCH1-208ENST00000430669 NOGQ13253 232 aa11.88□□□□□ -0.51
PTCH1-208ENST00000430669 CHI3L2Q15782 390 aa11.88□□□□□ -0.51
PTCH1-208ENST00000430669 DAB2IPQ5VWQ8 1189 aa11.88□□□□□ -0.51
PTCH1-208ENST00000430669 CHADLQ6NUI6 762 aa11.88□□□□□ -0.51
PTCH1-208ENST00000430669 ATXN2LQ8WWM7 1075 aaKnown RBP11.88□□□□□ -0.51
PTCH1-208ENST00000430669 MYCBPQ99417 103 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms