RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 SMIM35A0A1B0GVV1 85 aa5.21□□□□□ -1.58
HMGB1P49-201ENST00000418882 BTBD19C9JJ37 291 aa5.21□□□□□ -1.58
HMGB1P49-201ENST00000418882 J3KTA2 159 aa5.21□□□□□ -1.58
HMGB1P49-201ENST00000418882 PPP6CO00743 305 aa5.21□□□□□ -1.58
HMGB1P49-201ENST00000418882 PLIN1O60240 522 aa5.21□□□□□ -1.58
HMGB1P49-201ENST00000418882 USP1O94782 785 aa5.21□□□□□ -1.58
HMGB1P49-201ENST00000418882 PRR35P0CG20 571 aa5.21□□□□□ -1.58
HMGB1P49-201ENST00000418882 ARHGAP25P42331 645 aa5.21□□□□□ -1.58
HMGB1P49-201ENST00000418882 SSBP2P81877 361 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P49-201ENST00000418882 NSUN2Q08J23 767 aaKnown RBP eCLIP5.21□□□□□ -1.58
HMGB1P49-201ENST00000418882 GAB1Q13480 694 aa5.21□□□□□ -1.58
HMGB1P49-201ENST00000418882 KIAA1614Q5VZ46 1190 aa5.21□□□□□ -1.58
HMGB1P49-201ENST00000418882 DENND2CQ68D51 928 aa5.21□□□□□ -1.58
HMGB1P49-201ENST00000418882 MSANTD2Q6P1R3 559 aa5.21□□□□□ -1.58
HMGB1P49-201ENST00000418882 TOGARAM2Q6ZUX3 1019 aa5.21□□□□□ -1.58
HMGB1P49-201ENST00000418882 KRT73Q86Y46 540 aa5.21□□□□□ -1.58
HMGB1P49-201ENST00000418882 CLASRPQ8N2M8 674 aaKnown RBP5.21□□□□□ -1.58
HMGB1P49-201ENST00000418882 GRAMD1AQ96CP6 724 aa5.21□□□□□ -1.58
HMGB1P49-201ENST00000418882 MCRS1Q96EZ8 462 aa5.21□□□□□ -1.58
HMGB1P49-201ENST00000418882 HS6ST2Q96MM7 605 aa5.21□□□□□ -1.58
HMGB1P49-201ENST00000418882 TTLL2Q9BWV7 592 aa5.21□□□□□ -1.58
HMGB1P49-201ENST00000418882 EIF2AQ9BY44 585 aaKnown RBP5.21□□□□□ -1.58
HMGB1P49-201ENST00000418882 EPS8L2Q9H6S3 715 aa5.21□□□□□ -1.58
HMGB1P49-201ENST00000418882 MLXIPLQ9NP71 852 aa5.21□□□□□ -1.58
HMGB1P49-201ENST00000418882 CCDC187A0A096LP49 1063 aa5.2□□□□□ -1.58
HMGB1P49-201ENST00000418882 UBE2Q2LH0YL09 131 aa5.2□□□□□ -1.58
HMGB1P49-201ENST00000418882 RRHO14718 337 aa5.2□□□□□ -1.58
HMGB1P49-201ENST00000418882 PIP5K1BO14986 540 aa5.2□□□□□ -1.58
HMGB1P49-201ENST00000418882 TAF5LO75529 589 aa5.2□□□□□ -1.58
HMGB1P49-201ENST00000418882 VIPP01282 170 aa5.2□□□□□ -1.58
HMGB1P49-201ENST00000418882 TUBB4AP04350 444 aa5.2□□□□□ -1.58
HMGB1P49-201ENST00000418882 SRGAP2BP0DMP2 458 aa5.2□□□□□ -1.58
HMGB1P49-201ENST00000418882 HTR3AP46098 478 aa5.2□□□□□ -1.58
HMGB1P49-201ENST00000418882 CCDC15Q0P6D6 951 aa5.2□□□□□ -1.58
HMGB1P49-201ENST00000418882 BFSP2Q13515 415 aa5.2□□□□□ -1.58
HMGB1P49-201ENST00000418882 GRM4Q14833 912 aa5.2□□□□□ -1.58
HMGB1P49-201ENST00000418882 ZNF626Q68DY1 528 aa5.2□□□□□ -1.58
HMGB1P49-201ENST00000418882 SLC18B1Q6NT16 456 aa5.2□□□□□ -1.58
HMGB1P49-201ENST00000418882 SLC2A7Q6PXP3 512 aa5.2□□□□□ -1.58
HMGB1P49-201ENST00000418882 C16orf89Q6UX73 402 aa5.2□□□□□ -1.58
HMGB1P49-201ENST00000418882 TFAP2DQ7Z6R9 452 aa5.2□□□□□ -1.58
HMGB1P49-201ENST00000418882 NEK8Q86SG6 692 aa5.2□□□□□ -1.58
HMGB1P49-201ENST00000418882 GALNT16Q8N428 558 aa5.2□□□□□ -1.58
HMGB1P49-201ENST00000418882 FAM71DQ8N9W8 422 aa5.2□□□□□ -1.58
HMGB1P49-201ENST00000418882 ABHD10Q9NUJ1 306 aa5.2□□□□□ -1.58
HMGB1P49-201ENST00000418882 SCAF8Q9UPN6 1271 aaKnown RBP5.2□□□□□ -1.58
HMGB1P49-201ENST00000418882 CEP83Q9Y592 693 aa5.2□□□□□ -1.58
HMGB1P49-201ENST00000418882 WDR17Q8IZU2 1322 aa5.2□□□□□ -1.58
HMGB1P49-201ENST00000418882 TMEM232C9JQI7 657 aa5.19□□□□□ -1.58
HMGB1P49-201ENST00000418882 CTIFO43310 598 aaKnown RBP5.19□□□□□ -1.58
HMGB1P49-201ENST00000418882 IDEP14735 1019 aa5.19□□□□□ -1.58
HMGB1P49-201ENST00000418882 KLRK1P26718 216 aa5.19□□□□□ -1.58
HMGB1P49-201ENST00000418882 WDR5P61964 334 aaKnown RBP5.19□□□□□ -1.58
HMGB1P49-201ENST00000418882 YPEL5P62699 121 aa5.19□□□□□ -1.58
HMGB1P49-201ENST00000418882 DAZAP2Q15038 168 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P49-201ENST00000418882 CERKLQ49MI3 558 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P49-201ENST00000418882 ZKSCAN2Q63HK3 967 aa5.19□□□□□ -1.58
HMGB1P49-201ENST00000418882 CCDC144NLQ6NUI1 221 aa5.19□□□□□ -1.58
HMGB1P49-201ENST00000418882 RANBP10Q6VN20 620 aa5.19□□□□□ -1.58
HMGB1P49-201ENST00000418882 ZNF813Q6ZN06 617 aa5.19□□□□□ -1.58
HMGB1P49-201ENST00000418882 OR1N1Q8NGS0 311 aa5.19□□□□□ -1.58
HMGB1P49-201ENST00000418882 STYXQ8WUJ0 223 aa5.19□□□□□ -1.58
HMGB1P49-201ENST00000418882 MAP4K1Q92918 833 aa5.19□□□□□ -1.58
HMGB1P49-201ENST00000418882 MUL1Q969V5 352 aa5.19□□□□□ -1.58
HMGB1P49-201ENST00000418882 TM7SF3Q9NS93 570 aa5.19□□□□□ -1.58
HMGB1P49-201ENST00000418882 A0A087WV62 115 aa5.18□□□□□ -1.58
HMGB1P49-201ENST00000418882 ABHD14A-ACY1A0A1B0GW23 586 aa5.18□□□□□ -1.58
HMGB1P49-201ENST00000418882 WDR91A4D1P6 747 aa5.18□□□□□ -1.58
HMGB1P49-201ENST00000418882 FCHO1O14526 889 aa5.18□□□□□ -1.58
HMGB1P49-201ENST00000418882 PRYO14603 147 aa5.18□□□□□ -1.58
HMGB1P49-201ENST00000418882 HNRNPDLO14979 420 aaKnown RBP5.18□□□□□ -1.58
HMGB1P49-201ENST00000418882 ASNA1O43681 348 aa5.18□□□□□ -1.58
HMGB1P49-201ENST00000418882 BCAR3O75815 825 aa5.18□□□□□ -1.58
HMGB1P49-201ENST00000418882 TNFRSF6BO95407 300 aa5.18□□□□□ -1.58
HMGB1P49-201ENST00000418882 ITGA5P08648 1049 aa5.18□□□□□ -1.58
HMGB1P49-201ENST00000418882 CERS1P27544 350 aa5.18□□□□□ -1.58
HMGB1P49-201ENST00000418882 JAK3P52333 1124 aa5.18□□□□□ -1.58
HMGB1P49-201ENST00000418882 DGKQP52824 942 aa5.18□□□□□ -1.58
HMGB1P49-201ENST00000418882 GALNT1Q10472 559 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P49-201ENST00000418882 KLF9Q13886 244 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P49-201ENST00000418882 KPNB1Q14974 876 aaKnown RBP5.18□□□□□ -1.58
HMGB1P49-201ENST00000418882 MTX3Q5HYI7 312 aa5.18□□□□□ -1.58
HMGB1P49-201ENST00000418882 MEX3CQ5U5Q3 659 aaKnown RBP5.18□□□□□ -1.58
HMGB1P49-201ENST00000418882 TLDC1Q6P9B6 456 aa5.18□□□□□ -1.58
HMGB1P49-201ENST00000418882 RASGRP3Q8IV61 690 aa5.18□□□□□ -1.58
HMGB1P49-201ENST00000418882 SYTL1Q8IYJ3 562 aa5.18□□□□□ -1.58
HMGB1P49-201ENST00000418882 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P49-201ENST00000418882 TMEM41AQ96HV5 264 aa5.18□□□□□ -1.58
HMGB1P49-201ENST00000418882 CINPQ9BW66 212 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P49-201ENST00000418882 GATA5Q9BWX5 397 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P49-201ENST00000418882 WDR12Q9GZL7 423 aaKnown RBP5.18□□□□□ -1.58
HMGB1P49-201ENST00000418882 AGO4Q9HCK5 861 aaKnown RBP5.18□□□□□ -1.58
HMGB1P49-201ENST00000418882 TAGLN3Q9UI15 199 aa5.18□□□□□ -1.58
HMGB1P49-201ENST00000418882 DAAM1Q9Y4D1 1078 aa5.18□□□□□ -1.58
HMGB1P49-201ENST00000418882 GXYLT2A0PJZ3 443 aa5.17□□□□□ -1.58
HMGB1P49-201ENST00000418882 M0QYT0 321 aa5.17□□□□□ -1.58
HMGB1P49-201ENST00000418882 TP73O15350 636 aa5.17□□□□□ -1.58
HMGB1P49-201ENST00000418882 NTSR2O95665 410 aa5.17□□□□□ -1.58
HMGB1P49-201ENST00000418882 ANXA6P08133 673 aa5.17□□□□□ -1.58
HMGB1P49-201ENST00000418882 PEPDP12955 493 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms