RNA–Protein interactions for RNA: ENST00000401884.5

SNED1-204, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 4,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-204ENST00000401884 ALADP13716 330 aa18.2■□□□□ 0.5
SNED1-204ENST00000401884 RECQLP46063 649 aaPredicted RBP18.2■□□□□ 0.5
SNED1-204ENST00000401884 TRMT5Q32P41 509 aaKnown RBP18.2■□□□□ 0.5
SNED1-204ENST00000401884 SNX30Q5VWJ9 437 aa18.2■□□□□ 0.5
SNED1-204ENST00000401884 SEL1L3Q68CR1 1132 aa18.2■□□□□ 0.5
SNED1-204ENST00000401884 JOSD2Q8TAC2 188 aa18.2■□□□□ 0.5
SNED1-204ENST00000401884 DDX43Q9NXZ2 648 aaKnown RBP18.2■□□□□ 0.5
SNED1-204ENST00000401884 NCAM2O15394 837 aa18.2■□□□□ 0.5
SNED1-204ENST00000401884 USP12O75317 370 aa18.2■□□□□ 0.5
SNED1-204ENST00000401884 TPH1P17752 444 aa18.2■□□□□ 0.5
SNED1-204ENST00000401884 GTF2A2P52657 109 aa18.2■□□□□ 0.5
SNED1-204ENST00000401884 HUNKP57058 714 aa18.2■□□□□ 0.5
SNED1-204ENST00000401884 TMED1Q13445 227 aa18.2■□□□□ 0.5
SNED1-204ENST00000401884 MGAT5BQ3V5L5 792 aa18.2■□□□□ 0.5
SNED1-204ENST00000401884 C6orf10Q5SRN2 563 aa18.2■□□□□ 0.5
SNED1-204ENST00000401884 CLEC4DQ8WXI8 215 aa18.2■□□□□ 0.5
SNED1-204ENST00000401884 CELF6Q96J87 481 aaKnown RBP18.2■□□□□ 0.5
SNED1-204ENST00000401884 ETNK2Q9NVF9 386 aa18.2■□□□□ 0.5
SNED1-204ENST00000401884 BAZ2AQ9UIF9 1905 aaKnown RBP18.19■□□□□ 0.5
SNED1-204ENST00000401884 TULP2O00295 520 aa18.19■□□□□ 0.5
SNED1-204ENST00000401884 C4BPAP04003 597 aaKnown RBP18.19■□□□□ 0.5
SNED1-204ENST00000401884 ZCCHC18P0CG32 403 aa18.19■□□□□ 0.5
SNED1-204ENST00000401884 CHRNB2P17787 502 aa18.19■□□□□ 0.5
SNED1-204ENST00000401884 ADORA2AP29274 412 aa18.19■□□□□ 0.5
SNED1-204ENST00000401884 ADCYAP1R1P41586 468 aa18.19■□□□□ 0.5
SNED1-204ENST00000401884 NUP93Q8N1F7 819 aa18.19■□□□□ 0.5
SNED1-204ENST00000401884 STKLD1Q8NE28 680 aa18.19■□□□□ 0.5
SNED1-204ENST00000401884 ZNF512Q96ME7 567 aaPredicted RBP18.19■□□□□ 0.5
SNED1-204ENST00000401884 TTC36A6NLP5 189 aa18.19■□□□□ 0.5
SNED1-204ENST00000401884 ZNF157P51786 506 aaPredicted RBP18.19■□□□□ 0.5
SNED1-204ENST00000401884 PTPN20Q4JDL3 420 aa18.19■□□□□ 0.5
SNED1-204ENST00000401884 SYT15Q9BQS2 421 aa18.19■□□□□ 0.5
SNED1-204ENST00000401884 EFCAB1Q9HAE3 211 aa18.19■□□□□ 0.5
SNED1-204ENST00000401884 LRRC4CQ9HCJ2 640 aa18.19■□□□□ 0.5
SNED1-204ENST00000401884 RECQL4O94761 1208 aa18.19■□□□□ 0.5
SNED1-204ENST00000401884 SERPINE1P05121 402 aa18.19■□□□□ 0.5
SNED1-204ENST00000401884 MLH1P40692 756 aa18.19■□□□□ 0.5
SNED1-204ENST00000401884 HADHAP40939 763 aa18.19■□□□□ 0.5
SNED1-204ENST00000401884 HADHBP55084 474 aaKnown RBP18.19■□□□□ 0.5
SNED1-204ENST00000401884 CDK16Q00536 496 aa18.19■□□□□ 0.5
SNED1-204ENST00000401884 STX5Q13190 355 aa18.19■□□□□ 0.5
SNED1-204ENST00000401884 DYNC1I2Q13409 638 aaKnown RBP18.19■□□□□ 0.5
SNED1-204ENST00000401884 AGAP9Q5VTM2 703 aa18.19■□□□□ 0.5
SNED1-204ENST00000401884 RNF43Q68DV7 783 aa18.19■□□□□ 0.5
SNED1-204ENST00000401884 POU5F2Q8N7G0 328 aa18.19■□□□□ 0.5
SNED1-204ENST00000401884 SEPT5Q99719 369 aaPredicted RBP18.19■□□□□ 0.5
SNED1-204ENST00000401884 SNRNP25Q9BV90 132 aaKnown RBP18.19■□□□□ 0.5
SNED1-204ENST00000401884 ABHD16BQ9H3Z7 469 aa18.19■□□□□ 0.5
SNED1-204ENST00000401884 TRPC5OSA6NMA1 111 aa18.19■□□□□ 0.5
SNED1-204ENST00000401884 CHADO15335 359 aa18.19■□□□□ 0.5
SNED1-204ENST00000401884 STRNO43815 780 aa18.19■□□□□ 0.5
SNED1-204ENST00000401884 TRUB2O95900 331 aaKnown RBP18.19■□□□□ 0.5
SNED1-204ENST00000401884 LHX1P48742 406 aa18.19■□□□□ 0.5
SNED1-204ENST00000401884 ZBTB41Q5SVQ8 909 aa18.19■□□□□ 0.5
SNED1-204ENST00000401884 MIB1Q86YT6 1006 aa18.19■□□□□ 0.5
SNED1-204ENST00000401884 UNC45BQ8IWX7 931 aa18.19■□□□□ 0.5
SNED1-204ENST00000401884 VTA1Q9NP79 307 aa18.19■□□□□ 0.5
SNED1-204ENST00000401884 HES2Q9Y543 173 aa18.19■□□□□ 0.5
SNED1-204ENST00000401884 A0A1W2PPM1 405 aa18.18■□□□□ 0.5
SNED1-204ENST00000401884 ADSSP30520 456 aa18.18■□□□□ 0.5
SNED1-204ENST00000401884 SOX11P35716 441 aa18.18■□□□□ 0.5
SNED1-204ENST00000401884 INPP5AQ14642 412 aa18.18■□□□□ 0.5
SNED1-204ENST00000401884 RBBP7Q16576 425 aa18.18■□□□□ 0.5
SNED1-204ENST00000401884 HSDL1Q3SXM5 330 aa18.18■□□□□ 0.5
SNED1-204ENST00000401884 C16orf46Q6P387 395 aa18.18■□□□□ 0.5
SNED1-204ENST00000401884 ANGPTL8Q6UXH0 198 aa18.18■□□□□ 0.5
SNED1-204ENST00000401884 ZC3H15Q8WU90 426 aaKnown RBP18.18■□□□□ 0.5
SNED1-204ENST00000401884 RPRD1AQ96P16 312 aaPredicted RBP18.18■□□□□ 0.5
SNED1-204ENST00000401884 CCDC134Q9H6E4 229 aa18.18■□□□□ 0.5
SNED1-204ENST00000401884 CYP4F12Q9HCS2 524 aa18.18■□□□□ 0.5
SNED1-204ENST00000401884 UMODL1Q5DID0 1318 aa18.18■□□□□ 0.5
SNED1-204ENST00000401884 SEC24DO94855 1032 aaPredicted RBP18.18■□□□□ 0.5
SNED1-204ENST00000401884 CCDC130P13994 396 aa18.18■□□□□ 0.5
SNED1-204ENST00000401884 DSG1Q02413 1049 aa18.18■□□□□ 0.5
SNED1-204ENST00000401884 LAMB3Q13751 1172 aa18.18■□□□□ 0.5
SNED1-204ENST00000401884 FAM183BPQ6ZVS7 135 aa18.18■□□□□ 0.5
SNED1-204ENST00000401884 STK32AQ8WU08 396 aa18.18■□□□□ 0.5
SNED1-204ENST00000401884 TBC1D10AQ9BXI6 508 aa18.18■□□□□ 0.5
SNED1-204ENST00000401884 IL1RL2Q9HB29 575 aa18.18■□□□□ 0.5
SNED1-204ENST00000401884 SOX13Q9UN79 622 aa18.18■□□□□ 0.5
SNED1-204ENST00000401884 MAGEA13PA6NCF6 341 aa18.18■□□□□ 0.5
SNED1-204ENST00000401884 SLC1A6P48664 564 aa18.18■□□□□ 0.5
SNED1-204ENST00000401884 CAPRIN1Q14444 709 aaKnown RBP18.18■□□□□ 0.5
SNED1-204ENST00000401884 KPNB1Q14974 876 aaKnown RBP18.18■□□□□ 0.5
SNED1-204ENST00000401884 C10orf120Q5SQS8 335 aa18.18■□□□□ 0.5
SNED1-204ENST00000401884 GJC2Q5T442 439 aaPredicted RBP18.18■□□□□ 0.5
SNED1-204ENST00000401884 INPP5DQ92835 1189 aa18.18■□□□□ 0.5
SNED1-204ENST00000401884 COQ4Q9Y3A0 265 aa18.18■□□□□ 0.5
SNED1-204ENST00000401884 SLC30A1Q9Y6M5 507 aa18.18■□□□□ 0.5
SNED1-204ENST00000401884 THPOP40225 353 aa18.17■□□□□ 0.5
SNED1-204ENST00000401884 ABCE1P61221 599 aaKnown RBP18.17■□□□□ 0.5
SNED1-204ENST00000401884 POU6F1Q14863 301 aa18.17■□□□□ 0.5
SNED1-204ENST00000401884 AFF4Q9UHB7 1163 aaKnown RBP18.17■□□□□ 0.5
SNED1-204ENST00000401884 A0A096LPK6 155 aa18.17■□□□□ 0.5
SNED1-204ENST00000401884 TOMM70O94826 608 aa18.17■□□□□ 0.5
SNED1-204ENST00000401884 PTGIRP43119 386 aa18.17■□□□□ 0.5
SNED1-204ENST00000401884 FOXD4Q12950 439 aaPredicted RBP18.17■□□□□ 0.5
SNED1-204ENST00000401884 VEPH1Q14D04 833 aa18.17■□□□□ 0.5
SNED1-204ENST00000401884 DEFB107AQ8IZN7 70 aa18.17■□□□□ 0.5
SNED1-204ENST00000401884 C12orf29Q8N999 325 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms