RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 ARSEP51690 589 aa9.87□□□□□ -0.83
SF3A3-201ENST00000373019 PSMC1P62191 440 aaKnown RBP9.87□□□□□ -0.83
SF3A3-201ENST00000373019 FMO1Q01740 532 aa9.87□□□□□ -0.83
SF3A3-201ENST00000373019 WASHC5Q12768 1159 aa9.87□□□□□ -0.83
SF3A3-201ENST00000373019 GPS1Q13098 491 aa9.87□□□□□ -0.83
SF3A3-201ENST00000373019 STX3Q13277 289 aa9.87□□□□□ -0.83
SF3A3-201ENST00000373019 COG2Q14746 738 aa9.87□□□□□ -0.83
SF3A3-201ENST00000373019 CHI3L2Q15782 390 aa9.87□□□□□ -0.83
SF3A3-201ENST00000373019 TRIM16LQ309B1 348 aa9.87□□□□□ -0.83
SF3A3-201ENST00000373019 TGFBRAP1Q8WUH2 860 aa9.87□□□□□ -0.83
SF3A3-201ENST00000373019 FAR2Q96K12 515 aa9.87□□□□□ -0.83
SF3A3-201ENST00000373019 ZNF597Q96LX8 424 aa9.87□□□□□ -0.83
SF3A3-201ENST00000373019 CCDC138Q96M89 665 aa9.87□□□□□ -0.83
SF3A3-201ENST00000373019 UBE2TQ9NPD8 197 aaPredicted RBP9.87□□□□□ -0.83
SF3A3-201ENST00000373019 CNOT11Q9UKZ1 510 aaKnown RBP9.87□□□□□ -0.83
SF3A3-201ENST00000373019 UNCXA6NJT0 531 aa9.86□□□□□ -0.83
SF3A3-201ENST00000373019 TTC34A8MYJ7 566 aa9.86□□□□□ -0.83
SF3A3-201ENST00000373019 I3L4J1 428 aa9.86□□□□□ -0.83
SF3A3-201ENST00000373019 FAM189A1O60320 539 aa9.86□□□□□ -0.83
SF3A3-201ENST00000373019 KLHL41O60662 606 aa9.86□□□□□ -0.83
SF3A3-201ENST00000373019 FARP2O94887 1054 aaPredicted RBP9.86□□□□□ -0.83
SF3A3-201ENST00000373019 ACAT1P24752 427 aaKnown RBP9.86□□□□□ -0.83
SF3A3-201ENST00000373019 DCKP27707 260 aa9.86□□□□□ -0.83
SF3A3-201ENST00000373019 PSMC2P35998 433 aaKnown RBP9.86□□□□□ -0.83
SF3A3-201ENST00000373019 GPC3P51654 580 aa9.86□□□□□ -0.83
SF3A3-201ENST00000373019 FAAP100Q0VG06 881 aa9.86□□□□□ -0.83
SF3A3-201ENST00000373019 UBE2SQ16763 222 aa9.86□□□□□ -0.83
SF3A3-201ENST00000373019 PLEKHA7Q6IQ23 1121 aa9.86□□□□□ -0.83
SF3A3-201ENST00000373019 FAM20CQ8IXL6 584 aa9.86□□□□□ -0.83
SF3A3-201ENST00000373019 KAT5Q92993 513 aa9.86□□□□□ -0.83
SF3A3-201ENST00000373019 ACDQ96AP0 544 aa9.86□□□□□ -0.83
SF3A3-201ENST00000373019 PCDHA12Q9UN75 941 aa9.86□□□□□ -0.83
SF3A3-201ENST00000373019 SLC30A1Q9Y6M5 507 aa9.86□□□□□ -0.83
SF3A3-201ENST00000373019 KMOO15229 486 aa9.86□□□□□ -0.83
SF3A3-201ENST00000373019 KRT18P05783 430 aaKnown RBP9.86□□□□□ -0.83
SF3A3-201ENST00000373019 BMP3P12645 472 aa9.86□□□□□ -0.83
SF3A3-201ENST00000373019 BMPR1AP36894 532 aa9.86□□□□□ -0.83
SF3A3-201ENST00000373019 ADAM17P78536 824 aa9.86□□□□□ -0.83
SF3A3-201ENST00000373019 MTM1Q13496 603 aa9.86□□□□□ -0.83
SF3A3-201ENST00000373019 GRIK5Q16478 980 aa9.86□□□□□ -0.83
SF3A3-201ENST00000373019 Q3C1V9 767 aa9.86□□□□□ -0.83
SF3A3-201ENST00000373019 CIAPIN1Q6FI81 312 aa9.86□□□□□ -0.83
SF3A3-201ENST00000373019 ATG14Q6ZNE5 492 aa9.86□□□□□ -0.83
SF3A3-201ENST00000373019 MAVSQ7Z434 540 aa9.86□□□□□ -0.83
SF3A3-201ENST00000373019 SLC47A2Q86VL8 602 aa9.86□□□□□ -0.83
SF3A3-201ENST00000373019 HM13Q8TCT9 377 aa9.86□□□□□ -0.83
SF3A3-201ENST00000373019 RMND5BQ96G75 393 aaPredicted RBP9.86□□□□□ -0.83
SF3A3-201ENST00000373019 MMP19Q99542 508 aa9.86□□□□□ -0.83
SF3A3-201ENST00000373019 KLHL25Q9H0H3 589 aa9.86□□□□□ -0.83
SF3A3-201ENST00000373019 STK39Q9UEW8 545 aa9.86□□□□□ -0.83
SF3A3-201ENST00000373019 LIASO43766 372 aa9.86□□□□□ -0.83
SF3A3-201ENST00000373019 JRKO75564 520 aa9.86□□□□□ -0.83
SF3A3-201ENST00000373019 MYO1DO94832 1006 aa9.86□□□□□ -0.83
SF3A3-201ENST00000373019 VDRP11473 427 aa9.86□□□□□ -0.83
SF3A3-201ENST00000373019 ZNF182P17025 639 aaPredicted RBP9.86□□□□□ -0.83
SF3A3-201ENST00000373019 POLR2EP19388 210 aaKnown RBP9.86□□□□□ -0.83
SF3A3-201ENST00000373019 MSX2P35548 267 aaPredicted RBP9.86□□□□□ -0.83
SF3A3-201ENST00000373019 MGAT5BQ3V5L5 792 aa9.86□□□□□ -0.83
SF3A3-201ENST00000373019 POTEGQ6S5H5 508 aa9.86□□□□□ -0.83
SF3A3-201ENST00000373019 CYP2U1Q7Z449 544 aa9.86□□□□□ -0.83
SF3A3-201ENST00000373019 FBXL18Q96ME1 805 aa9.86□□□□□ -0.83
SF3A3-201ENST00000373019 SYT17Q9BSW7 474 aa9.86□□□□□ -0.83
SF3A3-201ENST00000373019 RETREG1Q9H6L5 497 aa9.86□□□□□ -0.83
SF3A3-201ENST00000373019 CXorf21Q9HAI6 301 aa9.86□□□□□ -0.83
SF3A3-201ENST00000373019 PIM2Q9P1W9 311 aa9.86□□□□□ -0.83
SF3A3-201ENST00000373019 ZBTB21Q9ULJ3 1066 aa9.86□□□□□ -0.83
SF3A3-201ENST00000373019 PLLPQ9Y342 182 aa9.86□□□□□ -0.83
SF3A3-201ENST00000373019 PCDHGA11Q9Y5H2 935 aa9.86□□□□□ -0.83
SF3A3-201ENST00000373019 RGPD3A6NKT7 1758 aaPredicted RBP9.86□□□□□ -0.83
SF3A3-201ENST00000373019 RGPD4Q7Z3J3 1758 aa9.86□□□□□ -0.83
SF3A3-201ENST00000373019 ARFGEF1Q9Y6D6 1849 aa9.86□□□□□ -0.83
SF3A3-201ENST00000373019 LY75O60449 1722 aa9.85□□□□□ -0.83
SF3A3-201ENST00000373019 ARHGEF37A1IGU5 675 aa9.85□□□□□ -0.83
SF3A3-201ENST00000373019 RGS13O14921 159 aa9.85□□□□□ -0.83
SF3A3-201ENST00000373019 GNL1P36915 607 aaPredicted RBP9.85□□□□□ -0.83
SF3A3-201ENST00000373019 STAT2P52630 851 aa9.85□□□□□ -0.83
SF3A3-201ENST00000373019 MS4A2Q01362 244 aa9.85□□□□□ -0.83
SF3A3-201ENST00000373019 PTK7Q13308 1070 aa9.85□□□□□ -0.83
SF3A3-201ENST00000373019 PMS2P3Q13401 168 aa9.85□□□□□ -0.83
SF3A3-201ENST00000373019 KLHL38Q2WGJ6 581 aa9.85□□□□□ -0.83
SF3A3-201ENST00000373019 PRR5LQ6MZQ0 368 aa9.85□□□□□ -0.83
SF3A3-201ENST00000373019 TTC23LQ6PF05 361 aa9.85□□□□□ -0.83
SF3A3-201ENST00000373019 CRLF3Q8IUI8 442 aa9.85□□□□□ -0.83
SF3A3-201ENST00000373019 PHTF2Q8N3S3 785 aa9.85□□□□□ -0.83
SF3A3-201ENST00000373019 SPERTQ8NA61 448 aa9.85□□□□□ -0.83
SF3A3-201ENST00000373019 PIGSQ96S52 555 aa9.85□□□□□ -0.83
SF3A3-201ENST00000373019 NPLQ9BXD5 320 aaPredicted RBP9.85□□□□□ -0.83
SF3A3-201ENST00000373019 CCDC68Q9H2F9 335 aa9.85□□□□□ -0.83
SF3A3-201ENST00000373019 ANAPC7Q9UJX3 599 aa9.85□□□□□ -0.83
SF3A3-201ENST00000373019 FARP1Q9Y4F1 1045 aaPredicted RBP9.85□□□□□ -0.83
SF3A3-201ENST00000373019 KDM3AQ9Y4C1 1321 aa9.85□□□□□ -0.83
SF3A3-201ENST00000373019 PSMD11O00231 422 aa9.85□□□□□ -0.83
SF3A3-201ENST00000373019 POLRMTO00411 1230 aaKnown RBP9.85□□□□□ -0.83
SF3A3-201ENST00000373019 CLASP2O75122 1294 aaKnown RBP9.85□□□□□ -0.83
SF3A3-201ENST00000373019 RNASEH2AO75792 299 aaKnown RBP9.85□□□□□ -0.83
SF3A3-201ENST00000373019 KLHL2O95198 593 aa9.85□□□□□ -0.83
SF3A3-201ENST00000373019 AP3M2P53677 418 aa9.85□□□□□ -0.83
SF3A3-201ENST00000373019 EIF3EP60228 445 aaKnown RBP9.85□□□□□ -0.83
SF3A3-201ENST00000373019 AGAP7PQ5VUJ5 663 aa9.85□□□□□ -0.83
SF3A3-201ENST00000373019 SUSD4Q5VX71 490 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms