RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 TTC27Q6P3X3 843 aa9.39□□□□□ -0.91
SMARCA1-202ENST00000371122 C11orf74Q86VG3 221 aa9.39□□□□□ -0.91
SMARCA1-202ENST00000371122 IQCKQ8N0W5 287 aa9.39□□□□□ -0.91
SMARCA1-202ENST00000371122 C18orf25Q96B23 403 aaPredicted RBP9.39□□□□□ -0.91
SMARCA1-202ENST00000371122 APBA2Q99767 749 aa9.39□□□□□ -0.91
SMARCA1-202ENST00000371122 FICDQ9BVA6 458 aa9.39□□□□□ -0.91
SMARCA1-202ENST00000371122 CDT1Q9H211 546 aa9.39□□□□□ -0.91
SMARCA1-202ENST00000371122 THEGQ9P2T0 379 aa9.39□□□□□ -0.91
SMARCA1-202ENST00000371122 SDR42E2A6NKP2 422 aa9.38□□□□□ -0.91
SMARCA1-202ENST00000371122 TRAPPC3O43617 180 aa9.38□□□□□ -0.91
SMARCA1-202ENST00000371122 LGR5O75473 907 aa9.38□□□□□ -0.91
SMARCA1-202ENST00000371122 CD48P09326 243 aa9.38□□□□□ -0.91
SMARCA1-202ENST00000371122 SCNN1BP51168 640 aa9.38□□□□□ -0.91
SMARCA1-202ENST00000371122 C1QBPQ07021 282 aaKnown RBP9.38□□□□□ -0.91
SMARCA1-202ENST00000371122 TCEA2Q15560 299 aa9.38□□□□□ -0.91
SMARCA1-202ENST00000371122 ZACNQ401N2 412 aa9.38□□□□□ -0.91
SMARCA1-202ENST00000371122 TATDN1Q6P1N9 297 aa9.38□□□□□ -0.91
SMARCA1-202ENST00000371122 TNS4Q8IZW8 715 aa9.38□□□□□ -0.91
SMARCA1-202ENST00000371122 SRPK1Q96SB4 655 aaKnown RBP9.38□□□□□ -0.91
SMARCA1-202ENST00000371122 FBXO6Q9NRD1 293 aaPredicted RBP9.38□□□□□ -0.91
SMARCA1-202ENST00000371122 BARX2Q9UMQ3 279 aaPredicted RBP9.38□□□□□ -0.91
SMARCA1-202ENST00000371122 SHOC2Q9UQ13 582 aa9.38□□□□□ -0.91
SMARCA1-202ENST00000371122 ARFGEF1Q9Y6D6 1849 aa9.38□□□□□ -0.91
SMARCA1-202ENST00000371122 KLRG2A4D1S0 409 aaPredicted RBP9.38□□□□□ -0.91
SMARCA1-202ENST00000371122 LGALS2P05162 132 aa9.38□□□□□ -0.91
SMARCA1-202ENST00000371122 THP07101 528 aa9.38□□□□□ -0.91
SMARCA1-202ENST00000371122 HSPA8P11142 646 aaKnown RBP9.38□□□□□ -0.91
SMARCA1-202ENST00000371122 AKT1P31749 480 aa9.38□□□□□ -0.91
SMARCA1-202ENST00000371122 PLEKHH3Q7Z736 793 aa9.38□□□□□ -0.91
SMARCA1-202ENST00000371122 SLC26A11Q86WA9 606 aa9.38□□□□□ -0.91
SMARCA1-202ENST00000371122 OMDQ99983 421 aa9.38□□□□□ -0.91
SMARCA1-202ENST00000371122 ULBP1Q9BZM6 244 aa9.38□□□□□ -0.91
SMARCA1-202ENST00000371122 ADNPQ9H2P0 1102 aa9.38□□□□□ -0.91
SMARCA1-202ENST00000371122 ADARB2Q9NS39 739 aaKnown RBP9.38□□□□□ -0.91
SMARCA1-202ENST00000371122 LZTS1Q9Y250 596 aa9.38□□□□□ -0.91
SMARCA1-202ENST00000371122 ZNF646O15015 1829 aaPredicted RBP9.38□□□□□ -0.91
SMARCA1-202ENST00000371122 CYP3A7-CYP3A51PA0A087WV96 503 aa9.38□□□□□ -0.91
SMARCA1-202ENST00000371122 SLC12A8A0AV02 714 aa9.38□□□□□ -0.91
SMARCA1-202ENST00000371122 C17orf102A2RUQ5 167 aa9.38□□□□□ -0.91
SMARCA1-202ENST00000371122 AGPSO00116 658 aa9.38□□□□□ -0.91
SMARCA1-202ENST00000371122 DCXO43602 365 aa9.38□□□□□ -0.91
SMARCA1-202ENST00000371122 ENTPD5O75356 428 aa9.38□□□□□ -0.91
SMARCA1-202ENST00000371122 MAPTP10636 758 aaKnown RBP9.38□□□□□ -0.91
SMARCA1-202ENST00000371122 KDELR1P24390 212 aa9.38□□□□□ -0.91
SMARCA1-202ENST00000371122 CYP3A7P24462 503 aa9.38□□□□□ -0.91
SMARCA1-202ENST00000371122 KLC1Q07866 573 aa9.38□□□□□ -0.91
SMARCA1-202ENST00000371122 KRT33BQ14525 404 aa9.38□□□□□ -0.91
SMARCA1-202ENST00000371122 MTHFD1LQ6UB35 978 aa9.38□□□□□ -0.91
SMARCA1-202ENST00000371122 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.38□□□□□ -0.91
SMARCA1-202ENST00000371122 ZBTB46Q86UZ6 589 aa9.38□□□□□ -0.91
SMARCA1-202ENST00000371122 AGGF1Q8N302 714 aaeCLIP9.38□□□□□ -0.912e-6■□□□□ 9.2
SMARCA1-202ENST00000371122 HES6Q96HZ4 224 aa9.38□□□□□ -0.91
SMARCA1-202ENST00000371122 MAGEB5Q9BZ81 275 aa9.38□□□□□ -0.91
SMARCA1-202ENST00000371122 MYLK2Q9H1R3 596 aa9.38□□□□□ -0.91
SMARCA1-202ENST00000371122 RNPEPQ9H4A4 650 aa9.38□□□□□ -0.91
SMARCA1-202ENST00000371122 SCHIP1Q9P0W5 487 aaPredicted RBP9.38□□□□□ -0.91
SMARCA1-202ENST00000371122 CRYL1Q9Y2S2 319 aa9.38□□□□□ -0.91
SMARCA1-202ENST00000371122 KIAA0100Q14667 2235 aaKnown RBP9.38□□□□□ -0.91
SMARCA1-202ENST00000371122 ANKRD12Q6UB98 2062 aa9.37□□□□□ -0.91
SMARCA1-202ENST00000371122 RNF103O00237 685 aa9.37□□□□□ -0.91
SMARCA1-202ENST00000371122 TRDMT1O14717 391 aaKnown RBP9.37□□□□□ -0.91
SMARCA1-202ENST00000371122 ANGPT2O15123 496 aa9.37□□□□□ -0.91
SMARCA1-202ENST00000371122 ASMTLO95671 621 aa9.37□□□□□ -0.91
SMARCA1-202ENST00000371122 SNHG28P0DPA3 235 aa9.37□□□□□ -0.91
SMARCA1-202ENST00000371122 RALBP11234 206 aa9.37□□□□□ -0.91
SMARCA1-202ENST00000371122 AARSP49588 968 aaKnown RBP eCLIP9.37□□□□□ -0.91
SMARCA1-202ENST00000371122 SCNN1GP51170 649 aa9.37□□□□□ -0.91
SMARCA1-202ENST00000371122 LRRC74AQ0VAA2 488 aa9.37□□□□□ -0.91
SMARCA1-202ENST00000371122 GALNTL6Q49A17 601 aa9.37□□□□□ -0.91
SMARCA1-202ENST00000371122 ZSCAN18Q8TBC5 510 aaPredicted RBP9.37□□□□□ -0.91
SMARCA1-202ENST00000371122 ZNF75CPQ92670 426 aaPredicted RBP9.37□□□□□ -0.91
SMARCA1-202ENST00000371122 TUBGCP3Q96CW5 907 aa9.37□□□□□ -0.91
SMARCA1-202ENST00000371122 ZFP42Q96MM3 310 aa9.37□□□□□ -0.91
SMARCA1-202ENST00000371122 CATSPER2Q96P56 530 aa9.37□□□□□ -0.91
SMARCA1-202ENST00000371122 TTYH3Q9C0H2 523 aa9.37□□□□□ -0.91
SMARCA1-202ENST00000371122 CD274Q9NZQ7 290 aa9.37□□□□□ -0.91
SMARCA1-202ENST00000371122 NT5C1B-RDH14C9J2C7 533 aa9.37□□□□□ -0.91
SMARCA1-202ENST00000371122 AGRPO00253 132 aa9.37□□□□□ -0.91
SMARCA1-202ENST00000371122 CBX4O00257 560 aa9.37□□□□□ -0.91
SMARCA1-202ENST00000371122 FCHO1O14526 889 aa9.37□□□□□ -0.91
SMARCA1-202ENST00000371122 PEX1O43933 1283 aa9.37□□□□□ -0.91
SMARCA1-202ENST00000371122 CHRM1P11229 460 aaPredicted RBP9.37□□□□□ -0.91
SMARCA1-202ENST00000371122 PKNOX1P55347 436 aa9.37□□□□□ -0.91
SMARCA1-202ENST00000371122 MAXP61244 160 aa9.37□□□□□ -0.91
SMARCA1-202ENST00000371122 YWHAZP63104 245 aaKnown RBP9.37□□□□□ -0.91
SMARCA1-202ENST00000371122 NOMO3P69849 1222 aa9.37□□□□□ -0.91
SMARCA1-202ENST00000371122 MED21Q13503 144 aa9.37□□□□□ -0.91
SMARCA1-202ENST00000371122 DPYSL3Q14195 570 aa9.37□□□□□ -0.91
SMARCA1-202ENST00000371122 DUPD1Q68J44 220 aa9.37□□□□□ -0.91
SMARCA1-202ENST00000371122 DNAJC14Q6Y2X3 702 aaPredicted RBP9.37□□□□□ -0.91
SMARCA1-202ENST00000371122 CATSPERGQ6ZRH7 1159 aa9.37□□□□□ -0.91
SMARCA1-202ENST00000371122 OR52K1Q8NGK4 314 aa9.37□□□□□ -0.91
SMARCA1-202ENST00000371122 CYGBQ8WWM9 190 aa9.37□□□□□ -0.91
SMARCA1-202ENST00000371122 RUBCNQ92622 972 aa9.37□□□□□ -0.91
SMARCA1-202ENST00000371122 EXOC2Q96KP1 924 aa9.37□□□□□ -0.91
SMARCA1-202ENST00000371122 MAGEB18Q96M61 343 aa9.37□□□□□ -0.91
SMARCA1-202ENST00000371122 GLT1D1Q96MS3 346 aa9.37□□□□□ -0.91
SMARCA1-202ENST00000371122 CPXM1Q96SM3 734 aa9.37□□□□□ -0.91
SMARCA1-202ENST00000371122 SMAD5Q99717 465 aaKnown RBP9.37□□□□□ -0.91
SMARCA1-202ENST00000371122 SYT15Q9BQS2 421 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 144.1 ms