RNA–Protein interactions for RNA: ENST00000369367.7

SCAF11-202, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SCAF11, Length 7,543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-202ENST00000369367 PRRT2Q7Z6L0 340 aaPredicted RBP10.14□□□□□ -0.79
SCAF11-202ENST00000369367 NUP93Q8N1F7 819 aa10.14□□□□□ -0.79
SCAF11-202ENST00000369367 CORO1BQ9BR76 489 aa10.14□□□□□ -0.79
SCAF11-202ENST00000369367 KRCC1Q9NPI7 259 aaPredicted RBP10.14□□□□□ -0.79
SCAF11-202ENST00000369367 RNF112Q9ULX5 631 aa10.14□□□□□ -0.79
SCAF11-202ENST00000369367 MEFVO15553 781 aaPredicted RBP10.14□□□□□ -0.79
SCAF11-202ENST00000369367 SEC31AO94979 1220 aaKnown RBP10.14□□□□□ -0.79
SCAF11-202ENST00000369367 GLRA2P23416 452 aa10.14□□□□□ -0.79
SCAF11-202ENST00000369367 SKOR1P84550 965 aa10.14□□□□□ -0.79
SCAF11-202ENST00000369367 CDH17Q12864 832 aa10.14□□□□□ -0.79
SCAF11-202ENST00000369367 GRM3Q14832 879 aa10.14□□□□□ -0.79
SCAF11-202ENST00000369367 CNGA2Q16280 664 aa10.14□□□□□ -0.79
SCAF11-202ENST00000369367 ZNF655Q8N720 491 aaPredicted RBP10.14□□□□□ -0.79
SCAF11-202ENST00000369367 C3orf20Q8ND61 904 aa10.14□□□□□ -0.79
SCAF11-202ENST00000369367 CATSPER1Q8NEC5 780 aa10.14□□□□□ -0.79
SCAF11-202ENST00000369367 CMTM5Q96DZ9 223 aa10.14□□□□□ -0.79
SCAF11-202ENST00000369367 C12orf42Q96LP6 360 aa10.14□□□□□ -0.79
SCAF11-202ENST00000369367 DCDC2Q9UHG0 476 aa10.14□□□□□ -0.79
SCAF11-202ENST00000369367 CDYLQ9Y232 598 aa10.14□□□□□ -0.79
SCAF11-202ENST00000369367 SALL3Q9BXA9 1300 aa10.14□□□□□ -0.79
SCAF11-202ENST00000369367 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.14□□□□□ -0.79
SCAF11-202ENST00000369367 KLHL2O95198 593 aa10.14□□□□□ -0.79
SCAF11-202ENST00000369367 KITP10721 976 aa10.14□□□□□ -0.79
SCAF11-202ENST00000369367 ACAT1P24752 427 aaKnown RBP10.14□□□□□ -0.79
SCAF11-202ENST00000369367 KBTBD12Q3ZCT8 623 aa10.14□□□□□ -0.79
SCAF11-202ENST00000369367 TREML2Q5T2D2 321 aa10.14□□□□□ -0.79
SCAF11-202ENST00000369367 CPA6Q8N4T0 437 aa10.14□□□□□ -0.79
SCAF11-202ENST00000369367 BSNDQ8WZ55 320 aa10.14□□□□□ -0.79
SCAF11-202ENST00000369367 SNX5Q9Y5X3 404 aa10.14□□□□□ -0.79
SCAF11-202ENST00000369367 MICAL2O94851 1124 aa10.14□□□□□ -0.79
SCAF11-202ENST00000369367 HTR1BP28222 390 aa10.14□□□□□ -0.79
SCAF11-202ENST00000369367 SLC12A3P55017 1021 aa10.14□□□□□ -0.79
SCAF11-202ENST00000369367 PSMC6P62333 389 aa10.14□□□□□ -0.79
SCAF11-202ENST00000369367 ABHD8Q96I13 439 aa10.14□□□□□ -0.79
SCAF11-202ENST00000369367 DNAJC7Q99615 494 aa10.14□□□□□ -0.79
SCAF11-202ENST00000369367 ZNF556Q9HAH1 456 aa10.14□□□□□ -0.79
SCAF11-202ENST00000369367 RNF103-CHMP3A0A140T963 221 aa10.14□□□□□ -0.79
SCAF11-202ENST00000369367 CYP2F1P24903 491 aa10.14□□□□□ -0.79
SCAF11-202ENST00000369367 MAP2K2P36507 400 aa10.14□□□□□ -0.79
SCAF11-202ENST00000369367 VSTM1Q6UX27 236 aa10.14□□□□□ -0.79
SCAF11-202ENST00000369367 ERI2A8K979 691 aaKnown RBP10.13□□□□□ -0.79
SCAF11-202ENST00000369367 CARSP49589 748 aaKnown RBP10.13□□□□□ -0.79
SCAF11-202ENST00000369367 C1orf186Q6ZWK4 172 aa10.13□□□□□ -0.79
SCAF11-202ENST00000369367 REPS1Q96D71 796 aa10.13□□□□□ -0.79
SCAF11-202ENST00000369367 SEMA6BQ9H3T3 888 aa10.13□□□□□ -0.79
SCAF11-202ENST00000369367 IFT172Q9UG01 1749 aa10.13□□□□□ -0.79
SCAF11-202ENST00000369367 GMNCA6NCL1 334 aa10.13□□□□□ -0.79
SCAF11-202ENST00000369367 MEIS2O14770 477 aa10.13□□□□□ -0.79
SCAF11-202ENST00000369367 ATMINO43313 823 aaPredicted RBP10.13□□□□□ -0.79
SCAF11-202ENST00000369367 GLRA3O75311 464 aa10.13□□□□□ -0.79
SCAF11-202ENST00000369367 EPB42P16452 691 aa10.13□□□□□ -0.79
SCAF11-202ENST00000369367 KELP23276 732 aa10.13□□□□□ -0.79
SCAF11-202ENST00000369367 NPY2RP49146 381 aa10.13□□□□□ -0.79
SCAF11-202ENST00000369367 ARID5BQ14865 1188 aa10.13□□□□□ -0.79
SCAF11-202ENST00000369367 SETMARQ53H47 684 aaPredicted RBP10.13□□□□□ -0.79
SCAF11-202ENST00000369367 COPS5Q92905 334 aa10.13□□□□□ -0.79
SCAF11-202ENST00000369367 WNT8BQ93098 351 aa10.13□□□□□ -0.79
SCAF11-202ENST00000369367 POP1Q99575 1024 aaKnown RBP10.13□□□□□ -0.79
SCAF11-202ENST00000369367 POLR1EQ9GZS1 481 aaKnown RBP10.13□□□□□ -0.79
SCAF11-202ENST00000369367 KPNA5O15131 536 aa10.13□□□□□ -0.79
SCAF11-202ENST00000369367 ACOX1Q15067 660 aa10.13□□□□□ -0.79
SCAF11-202ENST00000369367 GRAMD1BQ3KR37 738 aa10.13□□□□□ -0.79
SCAF11-202ENST00000369367 FAM133BQ5BKY9 247 aaKnown RBP10.13□□□□□ -0.79
SCAF11-202ENST00000369367 CXorf40AQ8TE69 158 aa10.13□□□□□ -0.79
SCAF11-202ENST00000369367 EDEM1Q92611 657 aa10.13□□□□□ -0.79
SCAF11-202ENST00000369367 RMDN2Q96LZ7 410 aa10.13□□□□□ -0.79
SCAF11-202ENST00000369367 MTMR9Q96QG7 549 aa10.13□□□□□ -0.79
SCAF11-202ENST00000369367 ACO2Q99798 780 aaKnown RBP10.13□□□□□ -0.79
SCAF11-202ENST00000369367 GJB1P08034 283 aa10.13□□□□□ -0.79
SCAF11-202ENST00000369367 ELNP15502 786 aa10.13□□□□□ -0.79
SCAF11-202ENST00000369367 PIK3CGP48736 1102 aa10.13□□□□□ -0.79
SCAF11-202ENST00000369367 KCNK10P57789 538 aa10.13□□□□□ -0.79
SCAF11-202ENST00000369367 GRIN1Q05586 938 aa10.13□□□□□ -0.79
SCAF11-202ENST00000369367 ORC1Q13415 861 aa10.13□□□□□ -0.79
SCAF11-202ENST00000369367 CCNG2Q16589 344 aa10.13□□□□□ -0.79
SCAF11-202ENST00000369367 MTSS1LQ765P7 747 aa10.13□□□□□ -0.79
SCAF11-202ENST00000369367 KIAA0319LQ8IZA0 1049 aa10.13□□□□□ -0.79
SCAF11-202ENST00000369367 C11orf84Q9BUA3 381 aaPredicted RBP10.13□□□□□ -0.79
SCAF11-202ENST00000369367 ARMC7Q9H6L4 198 aa10.13□□□□□ -0.79
SCAF11-202ENST00000369367 DTNAQ9Y4J8 743 aa10.13□□□□□ -0.79
SCAF11-202ENST00000369367 INHAP05111 366 aa10.13□□□□□ -0.79
SCAF11-202ENST00000369367 GUCA1AP43080 201 aaPredicted RBP10.13□□□□□ -0.79
SCAF11-202ENST00000369367 KCNA10Q16322 511 aa10.13□□□□□ -0.79
SCAF11-202ENST00000369367 SPOCD1Q6ZMY3 1216 aa10.13□□□□□ -0.79
SCAF11-202ENST00000369367 CEP68Q76N32 757 aa10.13□□□□□ -0.79
SCAF11-202ENST00000369367 NT5DC3Q86UY8 548 aa10.13□□□□□ -0.79
SCAF11-202ENST00000369367 DTNBP1Q96EV8 351 aa10.13□□□□□ -0.79
SCAF11-202ENST00000369367 PCDHA2Q9Y5H9 948 aa10.13□□□□□ -0.79
SCAF11-202ENST00000369367 MYO5BQ9ULV0 1848 aa10.13□□□□□ -0.79
SCAF11-202ENST00000369367 DARSP14868 501 aaKnown RBP10.13□□□□□ -0.79
SCAF11-202ENST00000369367 ICAM3P32942 547 aa10.13□□□□□ -0.79
SCAF11-202ENST00000369367 CAPZA2P47755 286 aa10.13□□□□□ -0.79
SCAF11-202ENST00000369367 RAB30Q15771 203 aa10.13□□□□□ -0.79
SCAF11-202ENST00000369367 GJB7Q6PEY0 223 aa10.13□□□□□ -0.79
SCAF11-202ENST00000369367 SERPINA13PQ6UXR4 307 aa10.13□□□□□ -0.79
SCAF11-202ENST00000369367 SLC9A9Q8IVB4 645 aa10.13□□□□□ -0.79
SCAF11-202ENST00000369367 TC2NQ8N9U0 490 aa10.13□□□□□ -0.79
SCAF11-202ENST00000369367 WHRNQ9P202 907 aa10.13□□□□□ -0.79
SCAF11-202ENST00000369367 FZD1Q9UP38 647 aa10.13□□□□□ -0.79
SCAF11-202ENST00000369367 CYTH3O43739 400 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms