RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 MON1BQ7L1V2 547 aa5.89□□□□□ -1.47
CD47-201ENST00000355354 CACNA2D4Q7Z3S7 1137 aa5.89□□□□□ -1.47
CD47-201ENST00000355354 PDCD7Q8N8D1 485 aaKnown RBP5.89□□□□□ -1.47
CD47-201ENST00000355354 PDCD2LQ9BRP1 358 aa5.89□□□□□ -1.47
CD47-201ENST00000355354 USP29Q9HBJ7 922 aa5.89□□□□□ -1.47
CD47-201ENST00000355354 HSPBP1Q9NZL4 362 aa5.89□□□□□ -1.47
CD47-201ENST00000355354 SLC6A14Q9UN76 642 aa5.89□□□□□ -1.47
CD47-201ENST00000355354 B4GALT4O60513 344 aa5.89□□□□□ -1.47
CD47-201ENST00000355354 NPTXRO95502 500 aa5.89□□□□□ -1.47
CD47-201ENST00000355354 IST1P53990 364 aa5.89□□□□□ -1.47
CD47-201ENST00000355354 CDH15P55291 814 aa5.89□□□□□ -1.47
CD47-201ENST00000355354 PPP2R5AQ15172 486 aa5.89□□□□□ -1.47
CD47-201ENST00000355354 SNRNP35Q16560 246 aaKnown RBP5.89□□□□□ -1.47
CD47-201ENST00000355354 ABCB5Q2M3G0 1257 aa5.89□□□□□ -1.47
CD47-201ENST00000355354 SOWAHAQ2M3V2 549 aa5.89□□□□□ -1.47
CD47-201ENST00000355354 TKFCQ3LXA3 575 aa5.89□□□□□ -1.47
CD47-201ENST00000355354 PEX26Q7Z412 305 aa5.89□□□□□ -1.47
CD47-201ENST00000355354 SMC6Q96SB8 1091 aa5.89□□□□□ -1.47
CD47-201ENST00000355354 DNMT3BQ9UBC3 853 aaKnown RBP5.89□□□□□ -1.47
CD47-201ENST00000355354 ATRQ13535 2644 aa5.89□□□□□ -1.47
CD47-201ENST00000355354 ATP6AP2A0A1C7CYW4 349 aa5.88□□□□□ -1.47
CD47-201ENST00000355354 ARHGAP10A1A4S6 786 aa5.88□□□□□ -1.47
CD47-201ENST00000355354 PHF2O75151 1096 aa5.88□□□□□ -1.47
CD47-201ENST00000355354 ATP6AP2O75787 350 aa5.88□□□□□ -1.47
CD47-201ENST00000355354 PGM3O95394 542 aa5.88□□□□□ -1.47
CD47-201ENST00000355354 GNA14O95837 355 aa5.88□□□□□ -1.47
CD47-201ENST00000355354 ADRA2AP08913 450 aa5.88□□□□□ -1.47
CD47-201ENST00000355354 NR4A1P22736 598 aa5.88□□□□□ -1.47
CD47-201ENST00000355354 PRPHP41219 470 aa5.88□□□□□ -1.47
CD47-201ENST00000355354 ZXDBP98169 803 aa5.88□□□□□ -1.47
CD47-201ENST00000355354 SLC25A3Q00325 362 aa5.88□□□□□ -1.47
CD47-201ENST00000355354 MAMLD1Q13495 774 aa5.88□□□□□ -1.47
CD47-201ENST00000355354 ZNF362Q5T0B9 420 aaPredicted RBP5.88□□□□□ -1.47
CD47-201ENST00000355354 C10orf76Q5T2E6 689 aa5.88□□□□□ -1.47
CD47-201ENST00000355354 SPOCD1Q6ZMY3 1216 aa5.88□□□□□ -1.47
CD47-201ENST00000355354 RINLQ6ZS11 566 aa5.88□□□□□ -1.47
CD47-201ENST00000355354 PAQR9Q6ZVX9 377 aa5.88□□□□□ -1.47
CD47-201ENST00000355354 ZBTB33Q86T24 672 aa5.88□□□□□ -1.47
CD47-201ENST00000355354 SLC13A5Q86YT5 568 aaPredicted RBP5.88□□□□□ -1.47
CD47-201ENST00000355354 LINC01465Q8N7H1 131 aa5.88□□□□□ -1.47
CD47-201ENST00000355354 ZNF606Q8WXB4 792 aa5.88□□□□□ -1.47
CD47-201ENST00000355354 INTS2Q9H0H0 1204 aaKnown RBP5.88□□□□□ -1.47
CD47-201ENST00000355354 HEY1Q9Y5J3 304 aa5.88□□□□□ -1.47
CD47-201ENST00000355354 GMNCA6NCL1 334 aa5.88□□□□□ -1.47
CD47-201ENST00000355354 CXCL8P10145 99 aa5.88□□□□□ -1.47
CD47-201ENST00000355354 VAV1P15498 845 aa5.88□□□□□ -1.47
CD47-201ENST00000355354 ATP11AP98196 1134 aa5.88□□□□□ -1.47
CD47-201ENST00000355354 KPNB1Q14974 876 aaKnown RBP5.88□□□□□ -1.47
CD47-201ENST00000355354 WHAMMP3Q1A5X7 153 aa5.88□□□□□ -1.47
CD47-201ENST00000355354 SFMBT2Q5VUG0 894 aa5.88□□□□□ -1.47
CD47-201ENST00000355354 C1orf127Q8N9H9 656 aa5.88□□□□□ -1.47
CD47-201ENST00000355354 NEK9Q8TD19 979 aa5.88□□□□□ -1.47
CD47-201ENST00000355354 PYDC1Q8WXC3 89 aa5.88□□□□□ -1.47
CD47-201ENST00000355354 TMEM106CQ9BVX2 250 aa5.88□□□□□ -1.47
CD47-201ENST00000355354 KLC2Q9H0B6 622 aa5.88□□□□□ -1.47
CD47-201ENST00000355354 CCDC195A0A1B0GUA6 201 aa5.88□□□□□ -1.47
CD47-201ENST00000355354 SSU72P8A0A1W2PR75 194 aa5.88□□□□□ -1.47
CD47-201ENST00000355354 PRR5-ARHGAP8B1AHC4 643 aa5.88□□□□□ -1.47
CD47-201ENST00000355354 TMEM253P0C7T8 217 aa5.88□□□□□ -1.47
CD47-201ENST00000355354 COL6A2P12110 1019 aa5.88□□□□□ -1.47
CD47-201ENST00000355354 CPOXP36551 454 aa5.88□□□□□ -1.47
CD47-201ENST00000355354 ARHGAP8P85298 464 aa5.88□□□□□ -1.47
CD47-201ENST00000355354 PLOD1Q02809 727 aaPredicted RBP5.88□□□□□ -1.47
CD47-201ENST00000355354 PDK1Q15118 436 aa5.88□□□□□ -1.47
CD47-201ENST00000355354 TARBP2Q15633 366 aaKnown RBP5.88□□□□□ -1.47
CD47-201ENST00000355354 CDO1Q16878 200 aa5.88□□□□□ -1.47
CD47-201ENST00000355354 UGT3A2Q3SY77 523 aa5.88□□□□□ -1.47
CD47-201ENST00000355354 SFT2D3Q587I9 215 aa5.88□□□□□ -1.47
CD47-201ENST00000355354 DPH6Q7L8W6 267 aa5.88□□□□□ -1.47
CD47-201ENST00000355354 GPR152Q8TDT2 470 aa5.88□□□□□ -1.47
CD47-201ENST00000355354 ARNTL2Q8WYA1 636 aa5.88□□□□□ -1.47
CD47-201ENST00000355354 CCDC124Q96CT7 223 aaKnown RBP5.88□□□□□ -1.47
CD47-201ENST00000355354 FCRL3Q96P31 734 aaPredicted RBP5.88□□□□□ -1.47
CD47-201ENST00000355354 NUP85Q9BW27 656 aa5.88□□□□□ -1.47
CD47-201ENST00000355354 APEX2Q9UBZ4 518 aa5.88□□□□□ -1.47
CD47-201ENST00000355354 KRT86O43790 486 aa5.88□□□□□ -1.47
CD47-201ENST00000355354 NME6O75414 186 aaPredicted RBP5.88□□□□□ -1.47
CD47-201ENST00000355354 ATP6V1G2O95670 118 aa5.88□□□□□ -1.47
CD47-201ENST00000355354 C4BPAP04003 597 aaKnown RBP5.88□□□□□ -1.47
CD47-201ENST00000355354 ACAT1P24752 427 aaKnown RBP5.88□□□□□ -1.47
CD47-201ENST00000355354 EPHA2P29317 976 aa5.88□□□□□ -1.47
CD47-201ENST00000355354 QARSP47897 775 aaKnown RBP5.88□□□□□ -1.47
CD47-201ENST00000355354 KRT17Q04695 432 aa5.88□□□□□ -1.47
CD47-201ENST00000355354 CAPSQ13938 189 aa5.88□□□□□ -1.47
CD47-201ENST00000355354 SURF1Q15526 300 aa5.88□□□□□ -1.47
CD47-201ENST00000355354 ANO4Q32M45 955 aa5.88□□□□□ -1.47
CD47-201ENST00000355354 TTC30AQ86WT1 665 aa5.88□□□□□ -1.47
CD47-201ENST00000355354 CCDC148Q8NFR7 591 aa5.88□□□□□ -1.47
CD47-201ENST00000355354 CAGE1Q8TC20 777 aa5.88□□□□□ -1.47
CD47-201ENST00000355354 UBE2FQ969M7 185 aa5.88□□□□□ -1.47
CD47-201ENST00000355354 HVCN1Q96D96 273 aa5.88□□□□□ -1.47
CD47-201ENST00000355354 FMO2Q99518 471 aa5.88□□□□□ -1.47
CD47-201ENST00000355354 NPHS2Q9NP85 383 aa5.88□□□□□ -1.47
CD47-201ENST00000355354 RUVBL2Q9Y230 463 aaKnown RBP5.88□□□□□ -1.47
CD47-201ENST00000355354 EML6Q6ZMW3 1958 aa5.87□□□□□ -1.47
CD47-201ENST00000355354 ERICH2A1L162 156 aa5.87□□□□□ -1.47
CD47-201ENST00000355354 FSBPO95073 299 aa5.87□□□□□ -1.47
CD47-201ENST00000355354 CLTBP09497 229 aa5.87□□□□□ -1.47
CD47-201ENST00000355354 GNAZP19086 355 aa5.87□□□□□ -1.47
CD47-201ENST00000355354 MAPK10P53779 464 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms