RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 RSBN1Q5VWQ0 802 aaPredicted RBP16.92■□□□□ 0.3
SH3RF1-201ENST00000284637 ZNF662Q6ZS27 426 aa16.92■□□□□ 0.3
SH3RF1-201ENST00000284637 BBS7Q8IWZ6 715 aa16.92■□□□□ 0.3
SH3RF1-201ENST00000284637 A0A1B0GW55 424 aa16.92■□□□□ 0.3
SH3RF1-201ENST00000284637 TNPO2O14787 897 aaKnown RBP16.92■□□□□ 0.3
SH3RF1-201ENST00000284637 DUX4L2P0CJ85 424 aa16.92■□□□□ 0.3
SH3RF1-201ENST00000284637 DUX4L3P0CJ86 424 aa16.92■□□□□ 0.3
SH3RF1-201ENST00000284637 DUX4L4P0CJ87 422 aa16.92■□□□□ 0.3
SH3RF1-201ENST00000284637 DUX4L5P0CJ88 424 aa16.92■□□□□ 0.3
SH3RF1-201ENST00000284637 DUX4L6P0CJ89 424 aa16.92■□□□□ 0.3
SH3RF1-201ENST00000284637 DUX4L7P0CJ90 424 aa16.92■□□□□ 0.3
SH3RF1-201ENST00000284637 RAB14P61106 215 aa16.92■□□□□ 0.3
SH3RF1-201ENST00000284637 NFIL3Q16649 462 aa16.92■□□□□ 0.3
SH3RF1-201ENST00000284637 NOTUMQ6P988 496 aa16.92■□□□□ 0.3
SH3RF1-201ENST00000284637 KCNK18Q7Z418 384 aa16.92■□□□□ 0.3
SH3RF1-201ENST00000284637 DGCR14Q96DF8 476 aaKnown RBP16.92■□□□□ 0.3
SH3RF1-201ENST00000284637 DYRK4Q9NR20 520 aa16.92■□□□□ 0.3
SH3RF1-201ENST00000284637 DUX4Q9UBX2 424 aa16.92■□□□□ 0.3
SH3RF1-201ENST00000284637 MGAT5Q09328 741 aa16.91■□□□□ 0.3
SH3RF1-201ENST00000284637 C10orf120Q5SQS8 335 aa16.91■□□□□ 0.3
SH3RF1-201ENST00000284637 BNIPLQ7Z465 357 aa16.91■□□□□ 0.3
SH3RF1-201ENST00000284637 TLK2Q86UE8 772 aa16.91■□□□□ 0.3
SH3RF1-201ENST00000284637 COLGALT1Q8NBJ5 622 aa16.91■□□□□ 0.3
SH3RF1-201ENST00000284637 ZNF606Q8WXB4 792 aa16.91■□□□□ 0.3
SH3RF1-201ENST00000284637 PHF21AQ96BD5 680 aa16.91■□□□□ 0.3
SH3RF1-201ENST00000284637 H2AFY2Q9P0M6 372 aaPredicted RBP16.91■□□□□ 0.3
SH3RF1-201ENST00000284637 COPG2Q9UBF2 871 aa16.91■□□□□ 0.3
SH3RF1-201ENST00000284637 SPASTQ9UBP0 616 aa16.91■□□□□ 0.3
SH3RF1-201ENST00000284637 CYTH3O43739 400 aa16.91■□□□□ 0.3
SH3RF1-201ENST00000284637 BAIAP3O94812 1187 aa16.91■□□□□ 0.3
SH3RF1-201ENST00000284637 DDX5P17844 614 aaKnown RBP16.91■□□□□ 0.3
SH3RF1-201ENST00000284637 RGS21Q2M5E4 152 aa16.91■□□□□ 0.3
SH3RF1-201ENST00000284637 MAB21L3Q8N8X9 362 aa16.91■□□□□ 0.3
SH3RF1-201ENST00000284637 L3MBTL3Q96JM7 780 aaPredicted RBP16.91■□□□□ 0.3
SH3RF1-201ENST00000284637 UBE2OQ9C0C9 1292 aaKnown RBP16.91■□□□□ 0.3
SH3RF1-201ENST00000284637 SIK3Q9Y2K2 1263 aa16.91■□□□□ 0.3
SH3RF1-201ENST00000284637 PCDHGC5Q9Y5F6 944 aa16.91■□□□□ 0.3
SH3RF1-201ENST00000284637 HEATR9A2RTY3 570 aa16.91■□□□□ 0.3
SH3RF1-201ENST00000284637 RCCD1A6NED2 376 aa16.91■□□□□ 0.3
SH3RF1-201ENST00000284637 TBKBP1A7MCY6 615 aa16.91■□□□□ 0.3
SH3RF1-201ENST00000284637 UBDO15205 165 aa16.91■□□□□ 0.3
SH3RF1-201ENST00000284637 GJB6O95452 261 aa16.91■□□□□ 0.3
SH3RF1-201ENST00000284637 PARNO95453 639 aaKnown RBP16.91■□□□□ 0.3
SH3RF1-201ENST00000284637 LSM8O95777 96 aaKnown RBP16.91■□□□□ 0.3
SH3RF1-201ENST00000284637 CYBBP04839 570 aa16.91■□□□□ 0.3
SH3RF1-201ENST00000284637 ETS2P15036 469 aa16.91■□□□□ 0.3
SH3RF1-201ENST00000284637 RAG1P15918 1043 aa16.91■□□□□ 0.3
SH3RF1-201ENST00000284637 TBCELQ5QJ74 424 aa16.91■□□□□ 0.3
SH3RF1-201ENST00000284637 ANGEL2Q5VTE6 544 aaKnown RBP16.91■□□□□ 0.3
SH3RF1-201ENST00000284637 LRRC8DQ7L1W4 858 aa16.91■□□□□ 0.3
SH3RF1-201ENST00000284637 SH3RF1Q7Z6J0 888 aa16.91■□□□□ 0.3
SH3RF1-201ENST00000284637 APOPT1Q96IL0 206 aa16.91■□□□□ 0.3
SH3RF1-201ENST00000284637 EIF3LQ9Y262 564 aaKnown RBP16.91■□□□□ 0.3
SH3RF1-201ENST00000284637 AAR2Q9Y312 384 aaKnown RBP16.91■□□□□ 0.3
SH3RF1-201ENST00000284637 VWA5AO00534 786 aa16.91■□□□□ 0.3
SH3RF1-201ENST00000284637 NR1H2P55055 460 aa16.91■□□□□ 0.3
SH3RF1-201ENST00000284637 PTPN11Q06124 597 aaPredicted RBP16.91■□□□□ 0.3
SH3RF1-201ENST00000284637 C1QBPQ07021 282 aaKnown RBP16.91■□□□□ 0.3
SH3RF1-201ENST00000284637 FAAP100Q0VG06 881 aa16.91■□□□□ 0.3
SH3RF1-201ENST00000284637 QPCTQ16769 361 aa16.91■□□□□ 0.3
SH3RF1-201ENST00000284637 GPAMQ9HCL2 828 aa16.91■□□□□ 0.3
SH3RF1-201ENST00000284637 UBQLN1Q9UMX0 589 aaKnown RBP16.91■□□□□ 0.3
SH3RF1-201ENST00000284637 A0A087WXM4 84 aa16.9■□□□□ 0.3
SH3RF1-201ENST00000284637 MPZL3Q6UWV2 235 aa16.9■□□□□ 0.3
SH3RF1-201ENST00000284637 ANKS3Q6ZW76 656 aa16.9■□□□□ 0.3
SH3RF1-201ENST00000284637 GLIS3Q8NEA6 775 aa16.9■□□□□ 0.3
SH3RF1-201ENST00000284637 RTFDC1Q9BY42 306 aaPredicted RBP16.9■□□□□ 0.3
SH3RF1-201ENST00000284637 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.9■□□□□ 0.3
SH3RF1-201ENST00000284637 KRT36O76013 467 aa16.9■□□□□ 0.3
SH3RF1-201ENST00000284637 PGM3O95394 542 aa16.9■□□□□ 0.3
SH3RF1-201ENST00000284637 SP100P23497 879 aaPredicted RBP16.9■□□□□ 0.3
SH3RF1-201ENST00000284637 CSTF3Q12996 717 aaKnown RBP16.9■□□□□ 0.3
SH3RF1-201ENST00000284637 KCTD19Q17RG1 926 aaPredicted RBP16.9■□□□□ 0.3
SH3RF1-201ENST00000284637 ATP6AP1LQ52LC2 224 aa16.9■□□□□ 0.3
SH3RF1-201ENST00000284637 RINLQ6ZS11 566 aa16.9■□□□□ 0.3
SH3RF1-201ENST00000284637 RNF181Q9P0P0 153 aa16.9■□□□□ 0.3
SH3RF1-201ENST00000284637 CRLS1Q9UJA2 301 aa16.9■□□□□ 0.3
SH3RF1-201ENST00000284637 USP20Q9Y2K6 914 aa16.9■□□□□ 0.3
SH3RF1-201ENST00000284637 SLCO1B7G3V0H7 640 aa16.9■□□□□ 0.3
SH3RF1-201ENST00000284637 CAPN1P07384 714 aa16.9■□□□□ 0.3
SH3RF1-201ENST00000284637 CYP2F1P24903 491 aa16.9■□□□□ 0.3
SH3RF1-201ENST00000284637 ARHGEF7Q14155 803 aa16.9■□□□□ 0.3
SH3RF1-201ENST00000284637 ZFP1Q6P2D0 407 aa16.9■□□□□ 0.3
SH3RF1-201ENST00000284637 BHMTQ93088 406 aa16.9■□□□□ 0.3
SH3RF1-201ENST00000284637 RPRD1AQ96P16 312 aaPredicted RBP16.9■□□□□ 0.3
SH3RF1-201ENST00000284637 MFN2O95140 757 aa16.9■□□□□ 0.3
SH3RF1-201ENST00000284637 SERPINE1P05121 402 aa16.9■□□□□ 0.3
SH3RF1-201ENST00000284637 TTKP33981 857 aa16.9■□□□□ 0.3
SH3RF1-201ENST00000284637 CBX3Q13185 183 aa16.9■□□□□ 0.3
SH3RF1-201ENST00000284637 CACHD1Q5VU97 1274 aa16.9■□□□□ 0.3
SH3RF1-201ENST00000284637 SEPHS2Q99611 448 aa16.9■□□□□ 0.3
SH3RF1-201ENST00000284637 NOL6Q9H6R4 1146 aaKnown RBP16.9■□□□□ 0.3
SH3RF1-201ENST00000284637 NMRK1Q9NWW6 199 aa16.9■□□□□ 0.3
SH3RF1-201ENST00000284637 EPHB6O15197 1021 aa16.9■□□□□ 0.3
SH3RF1-201ENST00000284637 GSNP06396 782 aa16.9■□□□□ 0.3
SH3RF1-201ENST00000284637 ZSCAN5DPP0CG00 497 aa16.9■□□□□ 0.3
SH3RF1-201ENST00000284637 PNPLA4P41247 253 aa16.9■□□□□ 0.3
SH3RF1-201ENST00000284637 PRIM2P49643 509 aa16.9■□□□□ 0.3
SH3RF1-201ENST00000284637 MYBPC2Q14324 1141 aa16.9■□□□□ 0.3
SH3RF1-201ENST00000284637 SLC5A9Q2M3M2 681 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms