RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 HSD3B1P14060 373 aa5.13□□□□□ -1.59
CCDC54-201ENST00000261058 PLA2G5P39877 138 aa5.13□□□□□ -1.59
CCDC54-201ENST00000261058 RENBPP51606 427 aa5.13□□□□□ -1.59
CCDC54-201ENST00000261058 ARL4CP56559 192 aa5.13□□□□□ -1.59
CCDC54-201ENST00000261058 CCDC144NLQ6NUI1 221 aa5.13□□□□□ -1.59
CCDC54-201ENST00000261058 RINT1Q6NUQ1 792 aa5.13□□□□□ -1.59
CCDC54-201ENST00000261058 KLHL17Q6TDP4 642 aa5.13□□□□□ -1.59
CCDC54-201ENST00000261058 ZNF804AQ7Z570 1209 aa5.13□□□□□ -1.59
CCDC54-201ENST00000261058 SIMC1Q8NDZ2 872 aa5.13□□□□□ -1.59
CCDC54-201ENST00000261058 SPPL3Q8TCT6 385 aa5.13□□□□□ -1.59
CCDC54-201ENST00000261058 EDC3Q96F86 508 aaKnown RBP5.13□□□□□ -1.59
CCDC54-201ENST00000261058 SNX18Q96RF0 628 aa5.13□□□□□ -1.59
CCDC54-201ENST00000261058 SYNPO2LQ9H987 977 aa5.13□□□□□ -1.59
CCDC54-201ENST00000261058 VPS45Q9NRW7 570 aa5.13□□□□□ -1.59
CCDC54-201ENST00000261058 MGAT4CQ9UBM8 478 aa5.13□□□□□ -1.59
CCDC54-201ENST00000261058 DAPP1Q9UN19 280 aa5.13□□□□□ -1.59
CCDC54-201ENST00000261058 CNTN6Q9UQ52 1028 aa5.13□□□□□ -1.59
CCDC54-201ENST00000261058 QSOX1O00391 747 aa5.12□□□□□ -1.59
CCDC54-201ENST00000261058 CES2O00748 559 aa5.12□□□□□ -1.59
CCDC54-201ENST00000261058 CER1O95813 267 aa5.12□□□□□ -1.59
CCDC54-201ENST00000261058 DRD1P21728 446 aa5.12□□□□□ -1.59
CCDC54-201ENST00000261058 FPR3P25089 353 aa5.12□□□□□ -1.59
CCDC54-201ENST00000261058 CXCR5P32302 372 aa5.12□□□□□ -1.59
CCDC54-201ENST00000261058 INHBCP55103 352 aa5.12□□□□□ -1.59
CCDC54-201ENST00000261058 GPC5P78333 572 aa5.12□□□□□ -1.59
CCDC54-201ENST00000261058 PPFIA1Q13136 1202 aa5.12□□□□□ -1.59
CCDC54-201ENST00000261058 ZNF362Q5T0B9 420 aaPredicted RBP5.12□□□□□ -1.59
CCDC54-201ENST00000261058 DENND2CQ68D51 928 aa5.12□□□□□ -1.59
CCDC54-201ENST00000261058 NFRKBQ6P4R8 1299 aa5.12□□□□□ -1.59
CCDC54-201ENST00000261058 OLFML1Q6UWY5 402 aa5.12□□□□□ -1.59
CCDC54-201ENST00000261058 RFX8Q6ZV50 586 aa5.12□□□□□ -1.59
CCDC54-201ENST00000261058 TTC30AQ86WT1 665 aa5.12□□□□□ -1.59
CCDC54-201ENST00000261058 SUGP1Q8IWZ8 645 aaKnown RBP5.12□□□□□ -1.59
CCDC54-201ENST00000261058 SDCCAG3Q96C92 435 aa5.12□□□□□ -1.59
CCDC54-201ENST00000261058 REPS1Q96D71 796 aa5.12□□□□□ -1.59
CCDC54-201ENST00000261058 PRR11Q96HE9 360 aaPredicted RBP5.12□□□□□ -1.59
CCDC54-201ENST00000261058 UROC1Q96N76 676 aa5.12□□□□□ -1.59
CCDC54-201ENST00000261058 PAGR1Q9BTK6 254 aa5.12□□□□□ -1.59
CCDC54-201ENST00000261058 SCAND2PQ9GZW5 306 aaPredicted RBP5.12□□□□□ -1.59
CCDC54-201ENST00000261058 TWSG1Q9GZX9 223 aa5.12□□□□□ -1.59
CCDC54-201ENST00000261058 VPS16Q9H269 839 aa5.12□□□□□ -1.59
CCDC54-201ENST00000261058 TMPRSS5Q9H3S3 457 aa5.12□□□□□ -1.59
CCDC54-201ENST00000261058 SAP30LQ9HAJ7 183 aa5.12□□□□□ -1.59
CCDC54-201ENST00000261058 SNX15Q9NRS6 342 aa5.12□□□□□ -1.59
CCDC54-201ENST00000261058 SLC17A6Q9P2U8 582 aa5.12□□□□□ -1.59
CCDC54-201ENST00000261058 ING1Q9UK53 422 aaPredicted RBP5.12□□□□□ -1.59
CCDC54-201ENST00000261058 ADAM21Q9UKJ8 722 aa5.12□□□□□ -1.59
CCDC54-201ENST00000261058 ZBTB1Q9Y2K1 713 aa5.12□□□□□ -1.59
CCDC54-201ENST00000261058 UBE2J1Q9Y385 318 aaPredicted RBP5.12□□□□□ -1.59
CCDC54-201ENST00000261058 CCDC187A0A096LP49 1063 aa5.11□□□□□ -1.59
CCDC54-201ENST00000261058 SUV39H1O43463 412 aa5.11□□□□□ -1.59
CCDC54-201ENST00000261058 CA12O43570 354 aa5.11□□□□□ -1.59
CCDC54-201ENST00000261058 RAMP2O60895 175 aa5.11□□□□□ -1.59
CCDC54-201ENST00000261058 APEHP13798 732 aaKnown RBP5.11□□□□□ -1.59
CCDC54-201ENST00000261058 MMP8P22894 467 aa5.11□□□□□ -1.59
CCDC54-201ENST00000261058 GDF5P43026 501 aa5.11□□□□□ -1.59
CCDC54-201ENST00000261058 CCT5P48643 541 aa5.11□□□□□ -1.59
CCDC54-201ENST00000261058 CYP4F2P78329 520 aa5.11□□□□□ -1.59
CCDC54-201ENST00000261058 SEMA3BQ13214 749 aa5.11□□□□□ -1.59
CCDC54-201ENST00000261058 EFR3AQ14156 821 aa5.11□□□□□ -1.59
CCDC54-201ENST00000261058 FHL2Q14192 279 aa5.11□□□□□ -1.59
CCDC54-201ENST00000261058 FAM187BQ17R55 369 aa5.11□□□□□ -1.59
CCDC54-201ENST00000261058 BTBD16Q32M84 506 aa5.11□□□□□ -1.59
CCDC54-201ENST00000261058 PCID2Q5JVF3 399 aa5.11□□□□□ -1.59
CCDC54-201ENST00000261058 L1TD1Q5T7N2 865 aaKnown RBP5.11□□□□□ -1.59
CCDC54-201ENST00000261058 ATPAF1Q5TC12 328 aaPredicted RBP5.11□□□□□ -1.59
CCDC54-201ENST00000261058 KIRREL2Q6UWL6 708 aa5.11□□□□□ -1.59
CCDC54-201ENST00000261058 RAB11FIP2Q7L804 512 aa5.11□□□□□ -1.59
CCDC54-201ENST00000261058 BCDIN3DQ7Z5W3 292 aaKnown RBP5.11□□□□□ -1.59
CCDC54-201ENST00000261058 TICAM2Q86XR7 235 aa5.11□□□□□ -1.59
CCDC54-201ENST00000261058 CPXCR1Q8N123 301 aa5.11□□□□□ -1.59
CCDC54-201ENST00000261058 C12orf76Q8N812 135 aaPredicted RBP5.11□□□□□ -1.59
CCDC54-201ENST00000261058 NGDNQ8NEJ9 315 aaKnown RBP5.11□□□□□ -1.59
CCDC54-201ENST00000261058 SLC22A17Q8WUG5 538 aa5.11□□□□□ -1.59
CCDC54-201ENST00000261058 PPM1EQ8WY54 764 aa5.11□□□□□ -1.59
CCDC54-201ENST00000261058 THAP4Q8WY91 577 aa5.11□□□□□ -1.59
CCDC54-201ENST00000261058 NPIPB3Q92617 1050 aa5.11□□□□□ -1.59
CCDC54-201ENST00000261058 GCC1Q96CN9 775 aa5.11□□□□□ -1.59
CCDC54-201ENST00000261058 MCRS1Q96EZ8 462 aa5.11□□□□□ -1.59
CCDC54-201ENST00000261058 SCLT1Q96NL6 688 aa5.11□□□□□ -1.59
CCDC54-201ENST00000261058 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.11□□□□□ -1.59
CCDC54-201ENST00000261058 SAYSD1Q9NPB0 183 aa5.11□□□□□ -1.59
CCDC54-201ENST00000261058 ASIC5Q9NY37 505 aa5.11□□□□□ -1.59
CCDC54-201ENST00000261058 FZD4Q9ULV1 537 aa5.11□□□□□ -1.59
CCDC54-201ENST00000261058 ST3GAL5Q9UNP4 418 aa5.11□□□□□ -1.59
CCDC54-201ENST00000261058 DMRT1Q9Y5R6 373 aa5.11□□□□□ -1.59
CCDC54-201ENST00000261058 H3BNC9 293 aa5.1□□□□□ -1.59
CCDC54-201ENST00000261058 H7C1Q1 480 aa5.1□□□□□ -1.59
CCDC54-201ENST00000261058 PRAMEF2O60811 474 aa5.1□□□□□ -1.59
CCDC54-201ENST00000261058 PDE8BO95263 885 aa5.1□□□□□ -1.59
CCDC54-201ENST00000261058 LARGE1O95461 756 aa5.1□□□□□ -1.59
CCDC54-201ENST00000261058 TMIGD3P0DMS9 266 aaPredicted RBP5.1□□□□□ -1.59
CCDC54-201ENST00000261058 ATF7P17544 494 aaPredicted RBP5.1□□□□□ -1.59
CCDC54-201ENST00000261058 ADD2P35612 726 aa5.1□□□□□ -1.59
CCDC54-201ENST00000261058 GSTM5P46439 218 aa5.1□□□□□ -1.59
CCDC54-201ENST00000261058 CFHR3Q02985 330 aa5.1□□□□□ -1.59
CCDC54-201ENST00000261058 TMEM63BQ5T3F8 832 aa5.1□□□□□ -1.59
CCDC54-201ENST00000261058 CEP85Q6P2H3 762 aa5.1□□□□□ -1.59
CCDC54-201ENST00000261058 ACSM6Q6P461 480 aa5.1□□□□□ -1.59
CCDC54-201ENST00000261058 MOGAT3Q86VF5 341 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms