RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 OXCT2Q9BYC2 517 aaPredicted RBP18.01■□□□□ 0.47
PHGDH-234ENST00000642041 PRDM16Q9HAZ2 1276 aa18.01■□□□□ 0.47
PHGDH-234ENST00000642041 TSPAN16Q9UKR8 245 aa18.01■□□□□ 0.47
PHGDH-234ENST00000642041 CDH9Q9ULB4 789 aa18.01■□□□□ 0.47
PHGDH-234ENST00000642041 CLUHO75153 1309 aa18■□□□□ 0.47
PHGDH-234ENST00000642041 PATJQ8NI35 1801 aa18■□□□□ 0.47
PHGDH-234ENST00000642041 TCRBV5S1A1TA0A578 114 aa18■□□□□ 0.47
PHGDH-234ENST00000642041 KANSL1LA0AUZ9 987 aa18■□□□□ 0.47
PHGDH-234ENST00000642041 CYB561D2O14569 222 aa18■□□□□ 0.47
PHGDH-234ENST00000642041 PTGESO14684 152 aa18■□□□□ 0.47
PHGDH-234ENST00000642041 GABRDO14764 452 aa18■□□□□ 0.47
PHGDH-234ENST00000642041 MAGEA9P43362 315 aa18■□□□□ 0.47
PHGDH-234ENST00000642041 SCNN1GP51170 649 aa18■□□□□ 0.47
PHGDH-234ENST00000642041 PDCLQ13371 301 aa18■□□□□ 0.47
PHGDH-234ENST00000642041 PPP1R15BQ5SWA1 713 aa18■□□□□ 0.47
PHGDH-234ENST00000642041 VSIG1Q86XK7 387 aa18■□□□□ 0.47
PHGDH-234ENST00000642041 PASD1Q8IV76 773 aa18■□□□□ 0.47
PHGDH-234ENST00000642041 WDTC1Q8N5D0 677 aa18■□□□□ 0.47
PHGDH-234ENST00000642041 GRK7Q8WTQ7 553 aa18■□□□□ 0.47
PHGDH-234ENST00000642041 OSBPL6Q9BZF3 934 aa18■□□□□ 0.47
PHGDH-234ENST00000642041 ANKZF1Q9H8Y5 726 aa18■□□□□ 0.47
PHGDH-234ENST00000642041 INPP5FQ9Y2H2 1132 aa18■□□□□ 0.47
PHGDH-234ENST00000642041 CCDC195A0A1B0GUA6 201 aa17.99■□□□□ 0.47
PHGDH-234ENST00000642041 MEIS3P2A8K0S8 358 aa17.99■□□□□ 0.47
PHGDH-234ENST00000642041 ANHXE9PGG2 379 aa17.99■□□□□ 0.47
PHGDH-234ENST00000642041 TMEM189-UBE2V1I3L0A0 370 aa17.99■□□□□ 0.47
PHGDH-234ENST00000642041 PDE2AO00408 941 aaPredicted RBP17.99■□□□□ 0.47
PHGDH-234ENST00000642041 ZNF189O75820 626 aaPredicted RBP17.99■□□□□ 0.47
PHGDH-234ENST00000642041 FGGP02679 453 aa17.99■□□□□ 0.47
PHGDH-234ENST00000642041 CYP11A1P05108 521 aa17.99■□□□□ 0.47
PHGDH-234ENST00000642041 GLI1P08151 1106 aa17.99■□□□□ 0.47
PHGDH-234ENST00000642041 CNPP09543 421 aaKnown RBP17.99■□□□□ 0.47
PHGDH-234ENST00000642041 TYMPP19971 482 aa17.99■□□□□ 0.47
PHGDH-234ENST00000642041 PMLP29590 882 aa17.99■□□□□ 0.47
PHGDH-234ENST00000642041 PCK1P35558 622 aa17.99■□□□□ 0.47
PHGDH-234ENST00000642041 RPL34P49207 117 aaKnown RBP17.99■□□□□ 0.47
PHGDH-234ENST00000642041 FNTAP49354 379 aa17.99■□□□□ 0.47
PHGDH-234ENST00000642041 DRG2P55039 364 aaKnown RBP17.99■□□□□ 0.47
PHGDH-234ENST00000642041 SHC2P98077 582 aa17.99■□□□□ 0.47
PHGDH-234ENST00000642041 NNTQ13423 1086 aa17.99■□□□□ 0.47
PHGDH-234ENST00000642041 NOMO2Q5JPE7 1267 aa17.99■□□□□ 0.47
PHGDH-234ENST00000642041 EFHC1Q5JVL4 640 aa17.99■□□□□ 0.47
PHGDH-234ENST00000642041 EMBQ6PCB8 327 aa17.99■□□□□ 0.47
PHGDH-234ENST00000642041 HDXQ7Z353 690 aa17.99■□□□□ 0.47
PHGDH-234ENST00000642041 TSC1Q92574 1164 aa17.99■□□□□ 0.47
PHGDH-234ENST00000642041 FAM84AQ96KN4 292 aa17.99■□□□□ 0.47
PHGDH-234ENST00000642041 DDX23Q9BUQ8 820 aaKnown RBP17.99■□□□□ 0.47
PHGDH-234ENST00000642041 SLC4A5Q9BY07 1137 aa17.99■□□□□ 0.47
PHGDH-234ENST00000642041 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.99■□□□□ 0.47
PHGDH-234ENST00000642041 UTP11Q9Y3A2 253 aaKnown RBP17.99■□□□□ 0.47
PHGDH-234ENST00000642041 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.99■□□□□ 0.47
PHGDH-234ENST00000642041 V9GYY5 206 aaPredicted RBP17.99■□□□□ 0.47
PHGDH-234ENST00000642041 SPEGQ15772 3267 aa17.98■□□□□ 0.47
PHGDH-234ENST00000642041 FBXO21O94952 628 aa17.98■□□□□ 0.47
PHGDH-234ENST00000642041 RHOXF2BP0C7M4 288 aa17.98■□□□□ 0.47
PHGDH-234ENST00000642041 LAMP2P13473 410 aa17.98■□□□□ 0.47
PHGDH-234ENST00000642041 PTPN7P35236 360 aa17.98■□□□□ 0.47
PHGDH-234ENST00000642041 RAP1GAPP47736 663 aa17.98■□□□□ 0.47
PHGDH-234ENST00000642041 SPEM2Q0P670 501 aa17.98■□□□□ 0.47
PHGDH-234ENST00000642041 HTR4Q13639 388 aa17.98■□□□□ 0.47
PHGDH-234ENST00000642041 UPP1Q16831 310 aa17.98■□□□□ 0.47
PHGDH-234ENST00000642041 PKDCCQ504Y2 493 aa17.98■□□□□ 0.47
PHGDH-234ENST00000642041 DENND1BQ6P3S1 775 aa17.98■□□□□ 0.47
PHGDH-234ENST00000642041 TTC13Q8NBP0 860 aa17.98■□□□□ 0.47
PHGDH-234ENST00000642041 NOA1Q8NC60 698 aaKnown RBP17.98■□□□□ 0.47
PHGDH-234ENST00000642041 GSTCDQ8NEC7 633 aa17.98■□□□□ 0.47
PHGDH-234ENST00000642041 CCHCR1Q8TD31 782 aa17.98■□□□□ 0.47
PHGDH-234ENST00000642041 BCL7CQ8WUZ0 217 aaPredicted RBP17.98■□□□□ 0.47
PHGDH-234ENST00000642041 SLC35F5Q8WV83 523 aa17.98■□□□□ 0.47
PHGDH-234ENST00000642041 KCTD13Q8WZ19 329 aa17.98■□□□□ 0.47
PHGDH-234ENST00000642041 SENP8Q96LD8 212 aa17.98■□□□□ 0.47
PHGDH-234ENST00000642041 FAM193BQ96PV7 902 aaPredicted RBP17.98■□□□□ 0.47
PHGDH-234ENST00000642041 RHOXF2Q9BQY4 288 aa17.98■□□□□ 0.47
PHGDH-234ENST00000642041 ACBD6Q9BR61 282 aa17.98■□□□□ 0.47
PHGDH-234ENST00000642041 MRPL45Q9BRJ2 306 aaKnown RBP17.98■□□□□ 0.47
PHGDH-234ENST00000642041 VIPAS39Q9H9C1 493 aa17.98■□□□□ 0.47
PHGDH-234ENST00000642041 FAM114A2Q9NRY5 505 aa17.98■□□□□ 0.47
PHGDH-234ENST00000642041 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.98■□□□□ 0.47
PHGDH-234ENST00000642041 STK39Q9UEW8 545 aa17.98■□□□□ 0.47
PHGDH-234ENST00000642041 PACSIN2Q9UNF0 486 aaPredicted RBP17.98■□□□□ 0.47
PHGDH-234ENST00000642041 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.97■□□□□ 0.47
PHGDH-234ENST00000642041 TMEM110-MUSTN1A8MSY1 372 aa17.97■□□□□ 0.47
PHGDH-234ENST00000642041 XPO1O14980 1071 aaKnown RBP17.97■□□□□ 0.47
PHGDH-234ENST00000642041 LILRB3O75022 631 aa17.97■□□□□ 0.47
PHGDH-234ENST00000642041 LRP3O75074 770 aa17.97■□□□□ 0.47
PHGDH-234ENST00000642041 TJP3O95049 919 aa17.97■□□□□ 0.47
PHGDH-234ENST00000642041 GALTP07902 379 aa17.97■□□□□ 0.47
PHGDH-234ENST00000642041 PLA2G4AP47712 749 aa17.97■□□□□ 0.47
PHGDH-234ENST00000642041 GUCY2FP51841 1108 aa17.97■□□□□ 0.47
PHGDH-234ENST00000642041 ELAVL2Q12926 359 aaKnown RBP17.97■□□□□ 0.47
PHGDH-234ENST00000642041 CYP1B1Q16678 543 aa17.97■□□□□ 0.47
PHGDH-234ENST00000642041 PTPN20Q4JDL3 420 aa17.97■□□□□ 0.47
PHGDH-234ENST00000642041 BOLA3Q53S33 107 aa17.97■□□□□ 0.47
PHGDH-234ENST00000642041 CC2D1AQ6P1N0 951 aaPredicted RBP17.97■□□□□ 0.47
PHGDH-234ENST00000642041 FBXO38Q6PIJ6 1188 aa17.97■□□□□ 0.47
PHGDH-234ENST00000642041 CCNI2Q6ZMN8 369 aaPredicted RBP17.97■□□□□ 0.47
PHGDH-234ENST00000642041 ACOT1Q86TX2 421 aa17.97■□□□□ 0.47
PHGDH-234ENST00000642041 XYLT1Q86Y38 959 aa17.97■□□□□ 0.47
PHGDH-234ENST00000642041 SLC13A5Q86YT5 568 aaPredicted RBP17.97■□□□□ 0.47
PHGDH-234ENST00000642041 MAP7D3Q8IWC1 876 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms