RNA–Protein interactions for RNA: ENST00000639406.1

KCNMA1-259, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 5,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-259ENST00000639406 C4orf22Q6V702 233 aa11.22□□□□□ -0.61
KCNMA1-259ENST00000639406 PAGE2Q7Z2X7 111 aa11.22□□□□□ -0.61
KCNMA1-259ENST00000639406 OR8H3Q8N146 312 aa11.22□□□□□ -0.61
KCNMA1-259ENST00000639406 CKAP2Q8WWK9 683 aa11.22□□□□□ -0.61
KCNMA1-259ENST00000639406 IP6K1Q92551 441 aa11.22□□□□□ -0.61
KCNMA1-259ENST00000639406 PLEKHF1Q96S99 279 aa11.22□□□□□ -0.61
KCNMA1-259ENST00000639406 GPATCH1Q9BRR8 931 aaKnown RBP11.22□□□□□ -0.61
KCNMA1-259ENST00000639406 TOR3AQ9H497 397 aa11.22□□□□□ -0.61
KCNMA1-259ENST00000639406 ZSCAN5CA6NGD5 496 aaPredicted RBP11.22□□□□□ -0.61
KCNMA1-259ENST00000639406 PPP1R3GB7ZBB8 358 aa11.22□□□□□ -0.61
KCNMA1-259ENST00000639406 LYNP07948 512 aa11.22□□□□□ -0.61
KCNMA1-259ENST00000639406 FAM228BP0C875 321 aa11.22□□□□□ -0.61
KCNMA1-259ENST00000639406 CPA3P15088 417 aa11.22□□□□□ -0.61
KCNMA1-259ENST00000639406 MAGP20916 626 aa11.22□□□□□ -0.61
KCNMA1-259ENST00000639406 CENPAP49450 140 aa11.22□□□□□ -0.61
KCNMA1-259ENST00000639406 GPC3P51654 580 aa11.22□□□□□ -0.61
KCNMA1-259ENST00000639406 ORC2Q13416 577 aaPredicted RBP11.22□□□□□ -0.61
KCNMA1-259ENST00000639406 DGKDQ16760 1214 aa11.22□□□□□ -0.61
KCNMA1-259ENST00000639406 SNX32Q86XE0 403 aa11.22□□□□□ -0.61
KCNMA1-259ENST00000639406 DPP10Q8N608 796 aa11.22□□□□□ -0.61
KCNMA1-259ENST00000639406 SH3TC2Q8TF17 1288 aa11.22□□□□□ -0.61
KCNMA1-259ENST00000639406 PAGR1Q9BTK6 254 aa11.22□□□□□ -0.61
KCNMA1-259ENST00000639406 CHORDC1Q9UHD1 332 aaPredicted RBP11.22□□□□□ -0.61
KCNMA1-259ENST00000639406 EME2A4GXA9 379 aaPredicted RBP11.21□□□□□ -0.61
KCNMA1-259ENST00000639406 SUPT7LO94864 414 aa11.21□□□□□ -0.61
KCNMA1-259ENST00000639406 PABPC1P11940 636 aaKnown RBP11.21□□□□□ -0.61
KCNMA1-259ENST00000639406 PKNOX1P55347 436 aa11.21□□□□□ -0.61
KCNMA1-259ENST00000639406 POU4F1Q01851 419 aa11.21□□□□□ -0.61
KCNMA1-259ENST00000639406 PARP6Q2NL67 630 aa11.21□□□□□ -0.61
KCNMA1-259ENST00000639406 SPDYCQ5MJ68 293 aa11.21□□□□□ -0.61
KCNMA1-259ENST00000639406 ZNF544Q6NX49 715 aa11.21□□□□□ -0.61
KCNMA1-259ENST00000639406 CYP4Z2PQ8N1L4 340 aa11.21□□□□□ -0.61
KCNMA1-259ENST00000639406 ZSWIM2Q8NEG5 633 aa11.21□□□□□ -0.61
KCNMA1-259ENST00000639406 ATG4AQ8WYN0 398 aa11.21□□□□□ -0.61
KCNMA1-259ENST00000639406 UGT2B28Q9BY64 529 aa11.21□□□□□ -0.61
KCNMA1-259ENST00000639406 KRCC1Q9NPI7 259 aaPredicted RBP11.21□□□□□ -0.61
KCNMA1-259ENST00000639406 THAP1Q9NVV9 213 aa11.21□□□□□ -0.61
KCNMA1-259ENST00000639406 KCNK4Q9NYG8 393 aa11.21□□□□□ -0.61
KCNMA1-259ENST00000639406 PTTG2Q9NZH5 202 aa11.21□□□□□ -0.61
KCNMA1-259ENST00000639406 WDR35Q9P2L0 1181 aa11.21□□□□□ -0.61
KCNMA1-259ENST00000639406 PKP3Q9Y446 797 aa11.21□□□□□ -0.61
KCNMA1-259ENST00000639406 LOC110117498-PIK3R3F6TDL0 507 aa11.21□□□□□ -0.61
KCNMA1-259ENST00000639406 GRK3P35626 688 aa11.21□□□□□ -0.61
KCNMA1-259ENST00000639406 GP5P40197 560 aa11.21□□□□□ -0.61
KCNMA1-259ENST00000639406 PPP3CCP48454 512 aa11.21□□□□□ -0.61
KCNMA1-259ENST00000639406 AAGABQ6PD74 315 aa11.21□□□□□ -0.61
KCNMA1-259ENST00000639406 PADI6Q6TGC4 694 aa11.21□□□□□ -0.61
KCNMA1-259ENST00000639406 SLC26A11Q86WA9 606 aa11.21□□□□□ -0.61
KCNMA1-259ENST00000639406 ZDHHC13Q8IUH4 622 aa11.21□□□□□ -0.61
KCNMA1-259ENST00000639406 TBC1D10CQ8IV04 446 aa11.21□□□□□ -0.61
KCNMA1-259ENST00000639406 RBM12BQ8IXT5 1001 aaKnown RBP11.21□□□□□ -0.61
KCNMA1-259ENST00000639406 CCDC126Q96EE4 140 aa11.21□□□□□ -0.61
KCNMA1-259ENST00000639406 ZC3H10Q96K80 434 aaKnown RBP11.21□□□□□ -0.61
KCNMA1-259ENST00000639406 ERGIC2Q96RQ1 377 aa11.21□□□□□ -0.61
KCNMA1-259ENST00000639406 RGS18Q9NS28 235 aa11.21□□□□□ -0.61
KCNMA1-259ENST00000639406 NUDT5Q9UKK9 219 aa11.21□□□□□ -0.61
KCNMA1-259ENST00000639406 ASAP1Q9ULH1 1129 aa11.21□□□□□ -0.61
KCNMA1-259ENST00000639406 PTPRMP28827 1452 aa11.21□□□□□ -0.62
KCNMA1-259ENST00000639406 IFI30P13284 250 aa11.21□□□□□ -0.62
KCNMA1-259ENST00000639406 AP1S2P56377 157 aa11.21□□□□□ -0.62
KCNMA1-259ENST00000639406 SLC25A3Q00325 362 aa11.21□□□□□ -0.62
KCNMA1-259ENST00000639406 BHLHB9Q6PI77 547 aa11.21□□□□□ -0.62
KCNMA1-259ENST00000639406 DRAXINQ8NBI3 349 aaPredicted RBP11.21□□□□□ -0.62
KCNMA1-259ENST00000639406 RNF38Q9H0F5 515 aa11.21□□□□□ -0.62
KCNMA1-259ENST00000639406 NUP50Q9UKX7 468 aa11.21□□□□□ -0.62
KCNMA1-259ENST00000639406 SLC26A4O43511 780 aa11.21□□□□□ -0.62
KCNMA1-259ENST00000639406 CST8O60676 142 aa11.21□□□□□ -0.62
KCNMA1-259ENST00000639406 ZBTB7AO95365 584 aa11.21□□□□□ -0.62
KCNMA1-259ENST00000639406 HIST1H2AGP0C0S8 130 aaPredicted RBP11.21□□□□□ -0.62
KCNMA1-259ENST00000639406 ALADP13716 330 aa11.21□□□□□ -0.62
KCNMA1-259ENST00000639406 HIST1H2ADP20671 130 aa11.21□□□□□ -0.62
KCNMA1-259ENST00000639406 CNTFP26441 200 aa11.21□□□□□ -0.62
KCNMA1-259ENST00000639406 NDUFAF6Q330K2 333 aa11.21□□□□□ -0.62
KCNMA1-259ENST00000639406 C11orf63Q6NUN7 778 aa11.21□□□□□ -0.62
KCNMA1-259ENST00000639406 MB21D2Q8IYB1 491 aaPredicted RBP11.21□□□□□ -0.62
KCNMA1-259ENST00000639406 PDPRQ8NCN5 879 aa11.21□□□□□ -0.62
KCNMA1-259ENST00000639406 PIK3C3Q8NEB9 887 aa11.21□□□□□ -0.62
KCNMA1-259ENST00000639406 APBB2Q92870 758 aa11.21□□□□□ -0.62
KCNMA1-259ENST00000639406 SH3KBP1Q96B97 665 aa11.21□□□□□ -0.62
KCNMA1-259ENST00000639406 HIST1H2AHQ96KK5 128 aa11.21□□□□□ -0.62
KCNMA1-259ENST00000639406 CCDC115Q96NT0 180 aa11.21□□□□□ -0.62
KCNMA1-259ENST00000639406 HIST1H2AJQ99878 128 aa11.21□□□□□ -0.62
KCNMA1-259ENST00000639406 H2AFJQ9BTM1 129 aa11.21□□□□□ -0.62
KCNMA1-259ENST00000639406 LY9Q9HBG7 655 aa11.21□□□□□ -0.62
KCNMA1-259ENST00000639406 ZNF335Q9H4Z2 1342 aaPredicted RBP11.21□□□□□ -0.62
KCNMA1-259ENST00000639406 APOL3O95236 402 aa11.2□□□□□ -0.62
KCNMA1-259ENST00000639406 ZBTB11O95625 1053 aaPredicted RBP11.2□□□□□ -0.62
KCNMA1-259ENST00000639406 MAGEA2P43356 314 aa11.2□□□□□ -0.62
KCNMA1-259ENST00000639406 FMO5P49326 533 aa11.2□□□□□ -0.62
KCNMA1-259ENST00000639406 PRELPP51888 382 aa11.2□□□□□ -0.62
KCNMA1-259ENST00000639406 RAB15P59190 212 aa11.2□□□□□ -0.62
KCNMA1-259ENST00000639406 STX4Q12846 297 aa11.2□□□□□ -0.62
KCNMA1-259ENST00000639406 TTI2Q6NXR4 508 aa11.2□□□□□ -0.62
KCNMA1-259ENST00000639406 CASP12Q6UXS9 341 aa11.2□□□□□ -0.62
KCNMA1-259ENST00000639406 CYP4Z1Q86W10 505 aa11.2□□□□□ -0.62
KCNMA1-259ENST00000639406 ZNF669Q96BR6 464 aaPredicted RBP11.2□□□□□ -0.62
KCNMA1-259ENST00000639406 APOPT1Q96IL0 206 aa11.2□□□□□ -0.62
KCNMA1-259ENST00000639406 PPP1R10Q96QC0 940 aaKnown RBP11.2□□□□□ -0.62
KCNMA1-259ENST00000639406 C7orf25Q9BPX7 421 aa11.2□□□□□ -0.62
KCNMA1-259ENST00000639406 PRRG3Q9BZD7 231 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms