RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 SLC27A1Q6PCB7 646 aa12.11□□□□□ -0.47
LINC00538-201ENST00000626109 KDELC1Q6UW63 502 aa12.11□□□□□ -0.47
LINC00538-201ENST00000626109 CDR2LQ86X02 465 aaPredicted RBP12.11□□□□□ -0.47
LINC00538-201ENST00000626109 SPATS2Q86XZ4 545 aaKnown RBP12.11□□□□□ -0.47
LINC00538-201ENST00000626109 TSEN2Q8NCE0 465 aaKnown RBP12.11□□□□□ -0.47
LINC00538-201ENST00000626109 CFAP36Q96G28 342 aa12.11□□□□□ -0.47
LINC00538-201ENST00000626109 RBM14Q96PK6 669 aaKnown RBP12.11□□□□□ -0.47
LINC00538-201ENST00000626109 FTHL17Q9BXU8 183 aa12.11□□□□□ -0.47
LINC00538-201ENST00000626109 PACSIN1Q9BY11 444 aa12.11□□□□□ -0.47
LINC00538-201ENST00000626109 TNKS2Q9H2K2 1166 aa12.11□□□□□ -0.47
LINC00538-201ENST00000626109 AAASQ9NRG9 546 aa12.11□□□□□ -0.47
LINC00538-201ENST00000626109 GPR34Q9UPC5 381 aa12.11□□□□□ -0.47
LINC00538-201ENST00000626109 NOSIPQ9Y314 301 aaKnown RBP12.11□□□□□ -0.47
LINC00538-201ENST00000626109 KIAA0391O15091 583 aaKnown RBP12.1□□□□□ -0.47
LINC00538-201ENST00000626109 CLIC2O15247 247 aa12.1□□□□□ -0.47
LINC00538-201ENST00000626109 PFKMP08237 780 aa12.1□□□□□ -0.47
LINC00538-201ENST00000626109 HARSP12081 509 aaKnown RBP12.1□□□□□ -0.47
LINC00538-201ENST00000626109 CSF2RAP15509 400 aa12.1□□□□□ -0.47
LINC00538-201ENST00000626109 PROZP22891 400 aa12.1□□□□□ -0.47
LINC00538-201ENST00000626109 CORO7P57737 925 aa12.1□□□□□ -0.47
LINC00538-201ENST00000626109 MRPS25P82663 173 aaKnown RBP12.1□□□□□ -0.47
LINC00538-201ENST00000626109 ORC1Q13415 861 aa12.1□□□□□ -0.47
LINC00538-201ENST00000626109 PPIGQ13427 754 aaKnown RBP eCLIP12.1□□□□□ -0.47
LINC00538-201ENST00000626109 ODF1Q14990 250 aa12.1□□□□□ -0.47
LINC00538-201ENST00000626109 DCAF4L1Q3SXM0 396 aa12.1□□□□□ -0.47
LINC00538-201ENST00000626109 EEF1DP3Q658K8 133 aa12.1□□□□□ -0.47
LINC00538-201ENST00000626109 DPY19L2P1Q6NXN4 242 aa12.1□□□□□ -0.47
LINC00538-201ENST00000626109 BRICD5Q6PL45 260 aa12.1□□□□□ -0.47
LINC00538-201ENST00000626109 LRIG3Q6UXM1 1119 aa12.1□□□□□ -0.47
LINC00538-201ENST00000626109 B4GALNT4Q76KP1 1039 aa12.1□□□□□ -0.47
LINC00538-201ENST00000626109 ZBTB33Q86T24 672 aa12.1□□□□□ -0.47
LINC00538-201ENST00000626109 SLC9B2Q86UD5 537 aa12.1□□□□□ -0.47
LINC00538-201ENST00000626109 C12orf56Q8IXR9 622 aa12.1□□□□□ -0.47
LINC00538-201ENST00000626109 EFCAB13Q8IY85 973 aa12.1□□□□□ -0.47
LINC00538-201ENST00000626109 DBF4BQ8NFT6 615 aa12.1□□□□□ -0.47
LINC00538-201ENST00000626109 TNIP2Q8NFZ5 429 aa12.1□□□□□ -0.47
LINC00538-201ENST00000626109 BCAS4Q8TDM0 211 aa12.1□□□□□ -0.47
LINC00538-201ENST00000626109 SLC35C1Q96A29 364 aa12.1□□□□□ -0.47
LINC00538-201ENST00000626109 TTC17Q96AE7 1141 aa12.1□□□□□ -0.47
LINC00538-201ENST00000626109 ZBTB45Q96K62 511 aaPredicted RBP12.1□□□□□ -0.47
LINC00538-201ENST00000626109 ASB2Q96Q27 587 aa12.1□□□□□ -0.47
LINC00538-201ENST00000626109 NAP1L3Q99457 506 aaPredicted RBP12.1□□□□□ -0.47
LINC00538-201ENST00000626109 MSTO1Q9BUK6 570 aa12.1□□□□□ -0.47
LINC00538-201ENST00000626109 STK33Q9BYT3 514 aa12.1□□□□□ -0.47
LINC00538-201ENST00000626109 QPCTLQ9NXS2 382 aa12.1□□□□□ -0.47
LINC00538-201ENST00000626109 ZMYND8Q9ULU4 1186 aaPredicted RBP12.1□□□□□ -0.47
LINC00538-201ENST00000626109 BARX2Q9UMQ3 279 aaPredicted RBP12.1□□□□□ -0.47
LINC00538-201ENST00000626109 DUSP12Q9UNI6 340 aa12.1□□□□□ -0.47
LINC00538-201ENST00000626109 MAPRE3Q9UPY8 281 aa12.1□□□□□ -0.47
LINC00538-201ENST00000626109 STYXL1Q9Y6J8 313 aa12.1□□□□□ -0.47
LINC00538-201ENST00000626109 SYNJ2BP-COX16A0A087WUM0 186 aa12.09□□□□□ -0.47
LINC00538-201ENST00000626109 RAD51CO43502 376 aa12.09□□□□□ -0.47
LINC00538-201ENST00000626109 MCF2P10911 925 aa12.09□□□□□ -0.47
LINC00538-201ENST00000626109 STMN1P16949 149 aa12.09□□□□□ -0.47
LINC00538-201ENST00000626109 SYN1P17600 705 aa12.09□□□□□ -0.47
LINC00538-201ENST00000626109 GRK6P43250 576 aa12.09□□□□□ -0.47
LINC00538-201ENST00000626109 FPGSQ05932 587 aa12.09□□□□□ -0.47
LINC00538-201ENST00000626109 EMC10Q5UCC4 262 aa12.09□□□□□ -0.47
LINC00538-201ENST00000626109 CNKSR3Q6P9H4 555 aa12.09□□□□□ -0.47
LINC00538-201ENST00000626109 USP51Q70EK9 711 aa12.09□□□□□ -0.47
LINC00538-201ENST00000626109 KDELC2Q7Z4H8 507 aa12.09□□□□□ -0.47
LINC00538-201ENST00000626109 GALNTL5Q7Z4T8 443 aa12.09□□□□□ -0.47
LINC00538-201ENST00000626109 KLHL7Q8IXQ5 586 aa12.09□□□□□ -0.47
LINC00538-201ENST00000626109 ARFGAP2Q8N6H7 521 aa12.09□□□□□ -0.47
LINC00538-201ENST00000626109 LRRC57Q8N9N7 239 aa12.09□□□□□ -0.47
LINC00538-201ENST00000626109 CASKIN2Q8WXE0 1202 aa12.09□□□□□ -0.47
LINC00538-201ENST00000626109 BADQ92934 168 aa12.09□□□□□ -0.47
LINC00538-201ENST00000626109 LBHD1Q9BQE6 289 aaPredicted RBP12.09□□□□□ -0.47
LINC00538-201ENST00000626109 CBWD1Q9BRT8 395 aa12.09□□□□□ -0.47
LINC00538-201ENST00000626109 CDT1Q9H211 546 aa12.09□□□□□ -0.47
LINC00538-201ENST00000626109 PCIF1Q9H4Z3 704 aa12.09□□□□□ -0.47
LINC00538-201ENST00000626109 LCMT1Q9UIC8 334 aa12.09□□□□□ -0.47
LINC00538-201ENST00000626109 AMFRQ9UKV5 643 aa12.09□□□□□ -0.47
LINC00538-201ENST00000626109 PACSIN2Q9UNF0 486 aaPredicted RBP12.09□□□□□ -0.47
LINC00538-201ENST00000626109 A0A0B4J269 797 aa12.09□□□□□ -0.47
LINC00538-201ENST00000626109 ABLIM1O14639 778 aa12.09□□□□□ -0.47
LINC00538-201ENST00000626109 GPR39O43194 453 aa12.09□□□□□ -0.47
LINC00538-201ENST00000626109 NPTXRO95502 500 aa12.09□□□□□ -0.47
LINC00538-201ENST00000626109 ADSSP30520 456 aa12.09□□□□□ -0.47
LINC00538-201ENST00000626109 HSPA9P38646 679 aaKnown RBP12.09□□□□□ -0.47
LINC00538-201ENST00000626109 CYP2J2P51589 502 aa12.09□□□□□ -0.47
LINC00538-201ENST00000626109 RNASE9P60153 205 aaKnown RBP12.09□□□□□ -0.47
LINC00538-201ENST00000626109 CETN1Q12798 172 aa12.09□□□□□ -0.47
LINC00538-201ENST00000626109 SP140Q13342 867 aa12.09□□□□□ -0.47
LINC00538-201ENST00000626109 STAT4Q14765 748 aa12.09□□□□□ -0.47
LINC00538-201ENST00000626109 MMEL1Q495T6 779 aa12.09□□□□□ -0.47
LINC00538-201ENST00000626109 FOXR1Q6PIV2 292 aa12.09□□□□□ -0.47
LINC00538-201ENST00000626109 KDM7AQ6ZMT4 941 aa12.09□□□□□ -0.47
LINC00538-201ENST00000626109 SLFN11Q7Z7L1 901 aa12.09□□□□□ -0.47
LINC00538-201ENST00000626109 SLC9A9Q8IVB4 645 aa12.09□□□□□ -0.47
LINC00538-201ENST00000626109 UBXN10Q96LJ8 280 aa12.09□□□□□ -0.47
LINC00538-201ENST00000626109 ADAM2Q99965 735 aa12.09□□□□□ -0.47
LINC00538-201ENST00000626109 SLITRK6Q9H5Y7 841 aa12.09□□□□□ -0.47
LINC00538-201ENST00000626109 IL23AQ9NPF7 189 aa12.09□□□□□ -0.47
LINC00538-201ENST00000626109 HSPBP1Q9NZL4 362 aa12.09□□□□□ -0.47
LINC00538-201ENST00000626109 ZNF624Q9P2J8 865 aaPredicted RBP12.09□□□□□ -0.47
LINC00538-201ENST00000626109 AGO2Q9UKV8 859 aaKnown RBP12.09□□□□□ -0.47
LINC00538-201ENST00000626109 A0A087WUV0 522 aaPredicted RBP12.08□□□□□ -0.48
LINC00538-201ENST00000626109 KRIT1O00522 736 aa12.08□□□□□ -0.48
LINC00538-201ENST00000626109 OGTO15294 1046 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms