RNA–Protein interactions for RNA: ENST00000625891.2

NRXN1-223, Transcript of neurexin 1, human

TSL 4 BASIC

Gene NRXN1, Length 1,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-223	ENST00000625891	CDY1	Q9Y6F8	540 aa		6.68	□□□□□ -1.34
NRXN1-223	ENST00000625891	LRPPRC	P42704	1394 aa	Known RBP	6.68	□□□□□ -1.34
NRXN1-223	ENST00000625891	TECPR2	O15040	1411 aa		6.67	□□□□□ -1.34
NRXN1-223	ENST00000625891	YTHDC2	Q9H6S0	1430 aa	Known RBP	6.67	□□□□□ -1.34
NRXN1-223	ENST00000625891		A0A087WZ62	844 aa		6.67	□□□□□ -1.34
NRXN1-223	ENST00000625891	APOL1	O14791	398 aa		6.67	□□□□□ -1.34
NRXN1-223	ENST00000625891	RASSF9	O75901	435 aa		6.67	□□□□□ -1.34
NRXN1-223	ENST00000625891	ACVR2A	P27037	513 aa		6.67	□□□□□ -1.34
NRXN1-223	ENST00000625891	IL1R2	P27930	398 aa		6.67	□□□□□ -1.34
NRXN1-223	ENST00000625891	RENBP	P51606	427 aa		6.67	□□□□□ -1.34
NRXN1-223	ENST00000625891	PMS2P11	Q13670	270 aa		6.67	□□□□□ -1.34
NRXN1-223	ENST00000625891	BLMH	Q13867	455 aa		6.67	□□□□□ -1.34
NRXN1-223	ENST00000625891	PTPA	Q15257	358 aa		6.67	□□□□□ -1.34
NRXN1-223	ENST00000625891	ARHGAP40	Q5TG30	622 aa		6.67	□□□□□ -1.34
NRXN1-223	ENST00000625891	LRCH2	Q5VUJ6	765 aa		6.67	□□□□□ -1.34
NRXN1-223	ENST00000625891	KIAA0895L	Q68EN5	471 aa		6.67	□□□□□ -1.34
NRXN1-223	ENST00000625891		Q6YL49	198 aa		6.67	□□□□□ -1.34
NRXN1-223	ENST00000625891	SYTL1	Q8IYJ3	562 aa		6.67	□□□□□ -1.34
NRXN1-223	ENST00000625891	CCDC33	Q8N5R6	958 aa		6.67	□□□□□ -1.34
NRXN1-223	ENST00000625891	TEX19	Q8NA77	164 aa		6.67	□□□□□ -1.34
NRXN1-223	ENST00000625891	MYCBPAP	Q8TBZ2	947 aa		6.67	□□□□□ -1.34
NRXN1-223	ENST00000625891	BPIFB1	Q8TDL5	484 aa		6.67	□□□□□ -1.34
NRXN1-223	ENST00000625891	KIAA1191	Q96A73	305 aa		6.67	□□□□□ -1.34
NRXN1-223	ENST00000625891	IQCD	Q96DY2	449 aa		6.67	□□□□□ -1.34
NRXN1-223	ENST00000625891		Q96MF0	132 aa		6.67	□□□□□ -1.34
NRXN1-223	ENST00000625891	GDF15	Q99988	308 aa		6.67	□□□□□ -1.34
NRXN1-223	ENST00000625891	GJB4	Q9NTQ9	266 aa		6.67	□□□□□ -1.34
NRXN1-223	ENST00000625891	DKK4	Q9UBT3	224 aa		6.67	□□□□□ -1.34
NRXN1-223	ENST00000625891	PGAP2	Q9UHJ9	254 aa		6.67	□□□□□ -1.34
NRXN1-223	ENST00000625891	ITGB1BP2	Q9UKP3	347 aa		6.67	□□□□□ -1.34
NRXN1-223	ENST00000625891	PNMA2	Q9UL42	364 aa		6.67	□□□□□ -1.34
NRXN1-223	ENST00000625891	TRPC5	Q9UL62	973 aa	Predicted RBP	6.67	□□□□□ -1.34
NRXN1-223	ENST00000625891	CEP83	Q9Y592	693 aa		6.67	□□□□□ -1.34
NRXN1-223	ENST00000625891	MAST3	O60307	1309 aa		6.67	□□□□□ -1.34
NRXN1-223	ENST00000625891	ALS2	Q96Q42	1657 aa		6.66	□□□□□ -1.34
NRXN1-223	ENST00000625891		A0A087WV62	115 aa		6.66	□□□□□ -1.34
NRXN1-223	ENST00000625891	WDR27	A2RRH5	827 aa		6.66	□□□□□ -1.34
NRXN1-223	ENST00000625891		H7C4K7	107 aa		6.66	□□□□□ -1.34
NRXN1-223	ENST00000625891	AREL1	O15033	823 aa		6.66	□□□□□ -1.34
NRXN1-223	ENST00000625891	RHOBTB3	O94955	611 aa		6.66	□□□□□ -1.34
NRXN1-223	ENST00000625891	LMNA	P02545	664 aa	Known RBP	6.66	□□□□□ -1.34
NRXN1-223	ENST00000625891	CHKA	P35790	457 aa		6.66	□□□□□ -1.34
NRXN1-223	ENST00000625891	IL6ST	P40189	918 aa	Predicted RBP	6.66	□□□□□ -1.34
NRXN1-223	ENST00000625891	MAPK10	P53779	464 aa		6.66	□□□□□ -1.34
NRXN1-223	ENST00000625891	BLOC1S1	P78537	153 aa		6.66	□□□□□ -1.34
NRXN1-223	ENST00000625891	SP2	Q02086	613 aa		6.66	□□□□□ -1.34
NRXN1-223	ENST00000625891	KRT17	Q04695	432 aa		6.66	□□□□□ -1.34
NRXN1-223	ENST00000625891	ARHGEF7	Q14155	803 aa		6.66	□□□□□ -1.34
NRXN1-223	ENST00000625891	STARD3	Q14849	445 aa		6.66	□□□□□ -1.34
NRXN1-223	ENST00000625891	ICE2	Q659A1	982 aa		6.66	□□□□□ -1.34
NRXN1-223	ENST00000625891	RGS7BP	Q6MZT1	257 aa	Predicted RBP	6.66	□□□□□ -1.34
NRXN1-223	ENST00000625891	CATSPERG	Q6ZRH7	1159 aa		6.66	□□□□□ -1.34
NRXN1-223	ENST00000625891	KRT28	Q7Z3Y7	464 aa		6.66	□□□□□ -1.34
NRXN1-223	ENST00000625891	KCTD20	Q7Z5Y7	419 aa		6.66	□□□□□ -1.34
NRXN1-223	ENST00000625891	VRK3	Q8IV63	474 aa		6.66	□□□□□ -1.34
NRXN1-223	ENST00000625891	YAF2	Q8IY57	180 aa		6.66	□□□□□ -1.34
NRXN1-223	ENST00000625891	SDR16C5	Q8N3Y7	309 aa		6.66	□□□□□ -1.34
NRXN1-223	ENST00000625891	EIF2A	Q9BY44	585 aa	Known RBP	6.66	□□□□□ -1.34
NRXN1-223	ENST00000625891	ACTRT3	Q9BYD9	372 aa		6.66	□□□□□ -1.34
NRXN1-223	ENST00000625891	MYLK2	Q9H1R3	596 aa		6.66	□□□□□ -1.34
NRXN1-223	ENST00000625891	AS3MT	Q9HBK9	375 aa		6.66	□□□□□ -1.34
NRXN1-223	ENST00000625891	ZSCAN32	Q9NX65	697 aa		6.66	□□□□□ -1.34
NRXN1-223	ENST00000625891	ZNF212	Q9UDV6	495 aa		6.66	□□□□□ -1.34
NRXN1-223	ENST00000625891	TES	Q9UGI8	421 aa	Known RBP	6.66	□□□□□ -1.34
NRXN1-223	ENST00000625891	MAGED2	Q9UNF1	606 aa	Predicted RBP	6.66	□□□□□ -1.34
NRXN1-223	ENST00000625891	ABCC11	Q96J66	1382 aa		6.66	□□□□□ -1.34
NRXN1-223	ENST00000625891	NRXN1	Q9ULB1	1477 aa		6.66	□□□□□ -1.34
NRXN1-223	ENST00000625891	ADGRB1	O14514	1584 aa		6.65	□□□□□ -1.34
NRXN1-223	ENST00000625891	VWC2L	B2RUY7	222 aa		6.65	□□□□□ -1.34
NRXN1-223	ENST00000625891	RRP9	O43818	475 aa	Known RBP	6.65	□□□□□ -1.34
NRXN1-223	ENST00000625891	NUDT3	O95989	172 aa		6.65	□□□□□ -1.34
NRXN1-223	ENST00000625891	ITIH3	Q06033	890 aa		6.65	□□□□□ -1.34
NRXN1-223	ENST00000625891	E2F2	Q14209	437 aa		6.65	□□□□□ -1.34
NRXN1-223	ENST00000625891	SLC29A2	Q14542	456 aa		6.65	□□□□□ -1.34
NRXN1-223	ENST00000625891	INSC	Q1MX18	579 aa		6.65	□□□□□ -1.34
NRXN1-223	ENST00000625891	SLC35G1	Q2M3R5	365 aa		6.65	□□□□□ -1.34
NRXN1-223	ENST00000625891	ZNF750	Q32MQ0	723 aa		6.65	□□□□□ -1.34
NRXN1-223	ENST00000625891	PTCHD3	Q3KNS1	767 aa		6.65	□□□□□ -1.34
NRXN1-223	ENST00000625891	CCDC38	Q502W7	563 aa		6.65	□□□□□ -1.34
NRXN1-223	ENST00000625891	CCDC174	Q6PII3	467 aa		6.65	□□□□□ -1.34
NRXN1-223	ENST00000625891	RNF44	Q7L0R7	432 aa		6.65	□□□□□ -1.34
NRXN1-223	ENST00000625891	ZNF527	Q8NB42	609 aa		6.65	□□□□□ -1.34
NRXN1-223	ENST00000625891	COQ10A	Q96MF6	247 aa		6.65	□□□□□ -1.34
NRXN1-223	ENST00000625891	AIFM2	Q9BRQ8	373 aa		6.65	□□□□□ -1.34
NRXN1-223	ENST00000625891	TPSD1	Q9BZJ3	242 aa		6.65	□□□□□ -1.34
NRXN1-223	ENST00000625891	SERTAD3	Q9UJW9	196 aa		6.65	□□□□□ -1.34
NRXN1-223	ENST00000625891	CDC23	Q9UJX2	597 aa		6.65	□□□□□ -1.34
NRXN1-223	ENST00000625891	HDAC9	Q9UKV0	1011 aa		6.65	□□□□□ -1.34
NRXN1-223	ENST00000625891	KIF1A	Q12756	1690 aa		6.65	□□□□□ -1.35
NRXN1-223	ENST00000625891	TNS1	Q9HBL0	1735 aa	Known RBP	6.64	□□□□□ -1.35
NRXN1-223	ENST00000625891	RAB27B	O00194	218 aa		6.64	□□□□□ -1.35
NRXN1-223	ENST00000625891	HNRNPDL	O14979	420 aa	Known RBP	6.64	□□□□□ -1.35
NRXN1-223	ENST00000625891	PPM1D	O15297	605 aa		6.64	□□□□□ -1.35
NRXN1-223	ENST00000625891	FFAR2	O15552	330 aa		6.64	□□□□□ -1.35
NRXN1-223	ENST00000625891	THAP12	O43422	761 aa		6.64	□□□□□ -1.35
NRXN1-223	ENST00000625891	SKAP2	O75563	359 aa	Predicted RBP	6.64	□□□□□ -1.35
NRXN1-223	ENST00000625891	RHO	P08100	348 aa		6.64	□□□□□ -1.35
NRXN1-223	ENST00000625891	PDHA1	P08559	390 aa		6.64	□□□□□ -1.35
NRXN1-223	ENST00000625891	HARS	P12081	509 aa	Known RBP	6.64	□□□□□ -1.35
NRXN1-223	ENST00000625891	PTDSS1	P48651	473 aa	Known RBP	6.64	□□□□□ -1.35

Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms