RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 EFTUD2Q15029 972 aaKnown RBP eCLIP19.89■□□□□ 0.777e-7■■■■■ 35.5
PRKCSH-209ENST00000589838 GALNTL6Q49A17 601 aa19.89■□□□□ 0.77
PRKCSH-209ENST00000589838 FAM133BQ5BKY9 247 aaKnown RBP19.89■□□□□ 0.77
PRKCSH-209ENST00000589838 FUKQ8N0W3 1084 aa19.89■□□□□ 0.77
PRKCSH-209ENST00000589838 CCDC63Q8NA47 563 aa19.89■□□□□ 0.77
PRKCSH-209ENST00000589838 TMEM40Q8WWA1 233 aa19.89■□□□□ 0.77
PRKCSH-209ENST00000589838 SLC44A1Q8WWI5 657 aa19.89■□□□□ 0.77
PRKCSH-209ENST00000589838 LPIN3Q9BQK8 851 aa19.89■□□□□ 0.77
PRKCSH-209ENST00000589838 PHTF1Q9UMS5 762 aa19.89■□□□□ 0.77
PRKCSH-209ENST00000589838 TCRBV9S1A1TA0A576 114 aa19.88■□□□□ 0.77
PRKCSH-209ENST00000589838 KBTBD13C9JR72 458 aa19.88■□□□□ 0.77
PRKCSH-209ENST00000589838 UBOX5O94941 541 aa19.88■□□□□ 0.77
PRKCSH-209ENST00000589838 LRPAP1P30533 357 aa19.88■□□□□ 0.77
PRKCSH-209ENST00000589838 ARL4AP40617 200 aa19.88■□□□□ 0.77
PRKCSH-209ENST00000589838 MATKP42679 507 aa19.88■□□□□ 0.77
PRKCSH-209ENST00000589838 NRLP54845 237 aa19.88■□□□□ 0.77
PRKCSH-209ENST00000589838 HIC1Q14526 733 aa19.88■□□□□ 0.77
PRKCSH-209ENST00000589838 SLC1A5Q15758 541 aa19.88■□□□□ 0.77
PRKCSH-209ENST00000589838 LVRNQ6Q4G3 990 aa19.88■□□□□ 0.77
PRKCSH-209ENST00000589838 VPS52Q8N1B4 723 aa19.88■□□□□ 0.77
PRKCSH-209ENST00000589838 CLEC4CQ8WTT0 213 aa19.88■□□□□ 0.77
PRKCSH-209ENST00000589838 MZB1Q8WU39 189 aa19.88■□□□□ 0.77
PRKCSH-209ENST00000589838 RNF39Q9H2S5 420 aa19.88■□□□□ 0.77
PRKCSH-209ENST00000589838 TMEM51Q9NW97 253 aa19.88■□□□□ 0.77
PRKCSH-209ENST00000589838 GJD2Q9UKL4 321 aa19.88■□□□□ 0.77
PRKCSH-209ENST00000589838 HACD1B0YJ81 288 aa19.88■□□□□ 0.77
PRKCSH-209ENST00000589838 ALDH3A1P30838 453 aa19.88■□□□□ 0.77
PRKCSH-209ENST00000589838 LILRA4P59901 499 aa19.88■□□□□ 0.77
PRKCSH-209ENST00000589838 YWHAZP63104 245 aaKnown RBP19.88■□□□□ 0.77
PRKCSH-209ENST00000589838 PTK7Q13308 1070 aa19.88■□□□□ 0.77
PRKCSH-209ENST00000589838 SLC25A52Q3SY17 297 aa19.88■□□□□ 0.77
PRKCSH-209ENST00000589838 LGSNQ5TDP6 509 aa19.88■□□□□ 0.77
PRKCSH-209ENST00000589838 CGB2Q6NT52 195 aa19.88■□□□□ 0.77
PRKCSH-209ENST00000589838 IGDCC3Q8IVU1 814 aa19.88■□□□□ 0.77
PRKCSH-209ENST00000589838 BANPQ8N9N5 519 aa19.88■□□□□ 0.77
PRKCSH-209ENST00000589838 B3GALNT2Q8NCR0 500 aa19.88■□□□□ 0.77
PRKCSH-209ENST00000589838 DUSP16Q9BY84 665 aa19.88■□□□□ 0.77
PRKCSH-209ENST00000589838 FLRT1Q9NZU1 646 aa19.88■□□□□ 0.77
PRKCSH-209ENST00000589838 HCRTO43612 131 aa19.87■□□□□ 0.77
PRKCSH-209ENST00000589838 EDF1O60869 148 aaKnown RBP19.87■□□□□ 0.77
PRKCSH-209ENST00000589838 TPSB2P20231 275 aa19.87■□□□□ 0.77
PRKCSH-209ENST00000589838 BNIP1Q12981 228 aa19.87■□□□□ 0.77
PRKCSH-209ENST00000589838 DNAJC3Q13217 504 aa19.87■□□□□ 0.77
PRKCSH-209ENST00000589838 TPSAB1Q15661 275 aa19.87■□□□□ 0.77
PRKCSH-209ENST00000589838 TAF2Q6P1X5 1199 aa19.87■□□□□ 0.77
PRKCSH-209ENST00000589838 CYB5D1Q6P9G0 228 aa19.87■□□□□ 0.77
PRKCSH-209ENST00000589838 FAM47EQ6ZV65 393 aa19.87■□□□□ 0.77
PRKCSH-209ENST00000589838 SMG8Q8ND04 991 aaKnown RBP19.87■□□□□ 0.77
PRKCSH-209ENST00000589838 PPP1R13LQ8WUF5 828 aa19.87■□□□□ 0.77
PRKCSH-209ENST00000589838 APBB2Q92870 758 aa19.87■□□□□ 0.77
PRKCSH-209ENST00000589838 QKIQ96PU8 341 aaKnown RBP eCLIP19.87■□□□□ 0.77
PRKCSH-209ENST00000589838 CSPG4P5Q96PW8 444 aa19.87■□□□□ 0.77
PRKCSH-209ENST00000589838 KCTD15Q96SI1 283 aaPredicted RBP19.87■□□□□ 0.77
PRKCSH-209ENST00000589838 ETNK1Q9HBU6 452 aa19.87■□□□□ 0.77
PRKCSH-209ENST00000589838 RNF19AQ9NV58 838 aa19.87■□□□□ 0.77
PRKCSH-209ENST00000589838 ZC3H7BQ9UGR2 993 aaKnown RBP19.87■□□□□ 0.77
PRKCSH-209ENST00000589838 USH1CQ9Y6N9 552 aa19.87■□□□□ 0.77
PRKCSH-209ENST00000589838 DOCK3Q8IZD9 2030 aa19.87■□□□□ 0.77
PRKCSH-209ENST00000589838 KPNA6O60684 536 aa19.86■□□□□ 0.77
PRKCSH-209ENST00000589838 DAB1O75553 588 aa19.86■□□□□ 0.77
PRKCSH-209ENST00000589838 APRTP07741 180 aa19.86■□□□□ 0.77
PRKCSH-209ENST00000589838 ALADP13716 330 aa19.86■□□□□ 0.77
PRKCSH-209ENST00000589838 TFE3P19532 575 aaPredicted RBP19.86■□□□□ 0.77
PRKCSH-209ENST00000589838 RGS2P41220 211 aa19.86■□□□□ 0.77
PRKCSH-209ENST00000589838 SARNPP82979 210 aaKnown RBP19.86■□□□□ 0.77
PRKCSH-209ENST00000589838 SOX4Q06945 474 aaPredicted RBP19.86■□□□□ 0.77
PRKCSH-209ENST00000589838 SETDB1Q15047 1291 aa19.86■□□□□ 0.77
PRKCSH-209ENST00000589838 KBTBD12Q3ZCT8 623 aa19.86■□□□□ 0.77
PRKCSH-209ENST00000589838 TWF2Q6IBS0 349 aaKnown RBP19.86■□□□□ 0.77
PRKCSH-209ENST00000589838 SLC26A11Q86WA9 606 aa19.86■□□□□ 0.77
PRKCSH-209ENST00000589838 HACE1Q8IYU2 909 aa19.86■□□□□ 0.77
PRKCSH-209ENST00000589838 KCTD13Q8WZ19 329 aa19.86■□□□□ 0.77
PRKCSH-209ENST00000589838 ZNF75CPQ92670 426 aaPredicted RBP19.86■□□□□ 0.77
PRKCSH-209ENST00000589838 FERMT1Q9BQL6 677 aa19.86■□□□□ 0.77
PRKCSH-209ENST00000589838 VPS11Q9H270 941 aa19.86■□□□□ 0.77
PRKCSH-209ENST00000589838 SLC38A7Q9NVC3 462 aa19.86■□□□□ 0.77
PRKCSH-209ENST00000589838 MTMR10Q9NXD2 777 aa19.86■□□□□ 0.77
PRKCSH-209ENST00000589838 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.86■□□□□ 0.77
PRKCSH-209ENST00000589838 M0QZ92 97 aa19.86■□□□□ 0.77
PRKCSH-209ENST00000589838 CYB561D2O14569 222 aa19.86■□□□□ 0.77
PRKCSH-209ENST00000589838 ZNF189O75820 626 aaPredicted RBP19.86■□□□□ 0.77
PRKCSH-209ENST00000589838 PTPN1P18031 435 aaKnown RBP19.86■□□□□ 0.77
PRKCSH-209ENST00000589838 SULT1E1P49888 294 aa19.86■□□□□ 0.77
PRKCSH-209ENST00000589838 ZNF618Q5T7W0 954 aa19.86■□□□□ 0.77
PRKCSH-209ENST00000589838 TTC39BQ5VTQ0 682 aaPredicted RBP19.86■□□□□ 0.77
PRKCSH-209ENST00000589838 HEATR6Q6AI08 1181 aaKnown RBP19.86■□□□□ 0.77
PRKCSH-209ENST00000589838 PIGZQ86VD9 579 aa19.86■□□□□ 0.77
PRKCSH-209ENST00000589838 PARP9Q8IXQ6 854 aa19.86■□□□□ 0.77
PRKCSH-209ENST00000589838 CCDC110Q8TBZ0 833 aa19.86■□□□□ 0.77
PRKCSH-209ENST00000589838 CFAP36Q96G28 342 aa19.86■□□□□ 0.77
PRKCSH-209ENST00000589838 ECT2Q9H8V3 914 aa19.86■□□□□ 0.77
PRKCSH-209ENST00000589838 XAB2Q9HCS7 855 aaKnown RBP19.86■□□□□ 0.77
PRKCSH-209ENST00000589838 ZNF180Q9UJW8 692 aa19.86■□□□□ 0.77
PRKCSH-209ENST00000589838 FZD10Q9ULW2 581 aa19.86■□□□□ 0.77
PRKCSH-209ENST00000589838 STAP1Q9ULZ2 295 aa19.86■□□□□ 0.77
PRKCSH-209ENST00000589838 HOXC8P31273 242 aa19.85■□□□□ 0.77
PRKCSH-209ENST00000589838 NOS2P35228 1153 aa19.85■□□□□ 0.77
PRKCSH-209ENST00000589838 BEX3Q00994 111 aa19.85■□□□□ 0.77
PRKCSH-209ENST00000589838 MTM1Q13496 603 aa19.85■□□□□ 0.77
PRKCSH-209ENST00000589838 TAF1CQ15572 869 aaPredicted RBP19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 468.8 ms