RNA–Protein interactions for RNA: ENST00000582469.1

SMG8-206, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 1,144 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-206ENST00000582469 ADRA1DP25100 572 aa6.24□□□□□ -1.41
SMG8-206ENST00000582469 PBX1P40424 430 aa6.24□□□□□ -1.41
SMG8-206ENST00000582469 DGKQP52824 942 aa6.24□□□□□ -1.41
SMG8-206ENST00000582469 ELF2Q15723 593 aa6.24□□□□□ -1.41
SMG8-206ENST00000582469 ZNF362Q5T0B9 420 aaPredicted RBP6.24□□□□□ -1.41
SMG8-206ENST00000582469 LINC01465Q8N7H1 131 aa6.24□□□□□ -1.41
SMG8-206ENST00000582469 PNPLA1Q8N8W4 532 aa6.24□□□□□ -1.41
SMG8-206ENST00000582469 STT3BQ8TCJ2 826 aa6.24□□□□□ -1.41
SMG8-206ENST00000582469 OVCA2Q8WZ82 227 aa6.24□□□□□ -1.41
SMG8-206ENST00000582469 PAAF1Q9BRP4 392 aa6.24□□□□□ -1.41
SMG8-206ENST00000582469 KRTAP17-1Q9BYP8 105 aa6.24□□□□□ -1.41
SMG8-206ENST00000582469 GAR1Q9NY12 217 aaKnown RBP6.24□□□□□ -1.41
SMG8-206ENST00000582469 DACT1Q9NYF0 836 aa6.24□□□□□ -1.41
SMG8-206ENST00000582469 CCNL1Q9UK58 526 aaPredicted RBP6.24□□□□□ -1.41
SMG8-206ENST00000582469 TLK1Q9UKI8 766 aa6.24□□□□□ -1.41
SMG8-206ENST00000582469 SCAF8Q9UPN6 1271 aaKnown RBP6.24□□□□□ -1.41
SMG8-206ENST00000582469 FNDC1Q4ZHG4 1894 aaPredicted RBP6.24□□□□□ -1.41
SMG8-206ENST00000582469 RB1CC1Q8TDY2 1594 aa6.23□□□□□ -1.41
SMG8-206ENST00000582469 hCG_1642624A0A1W2PR95 340 aa6.23□□□□□ -1.41
SMG8-206ENST00000582469 J3KTA2 159 aa6.23□□□□□ -1.41
SMG8-206ENST00000582469 TAF5LO75529 589 aa6.23□□□□□ -1.41
SMG8-206ENST00000582469 VEGFAP15692 232 aaPredicted RBP6.23□□□□□ -1.41
SMG8-206ENST00000582469 CHKAP35790 457 aa6.23□□□□□ -1.41
SMG8-206ENST00000582469 GRK6P43250 576 aa6.23□□□□□ -1.41
SMG8-206ENST00000582469 CLK3P49761 638 aaKnown RBP6.23□□□□□ -1.41
SMG8-206ENST00000582469 DIO1P49895 249 aa6.23□□□□□ -1.41
SMG8-206ENST00000582469 POLE2P56282 527 aa6.23□□□□□ -1.41
SMG8-206ENST00000582469 DEUP1Q05D60 604 aa6.23□□□□□ -1.41
SMG8-206ENST00000582469 DNASE1L3Q13609 305 aa6.23□□□□□ -1.41
SMG8-206ENST00000582469 TRIM60Q495X7 471 aa6.23□□□□□ -1.41
SMG8-206ENST00000582469 RNASE12Q5GAN4 147 aaKnown RBP6.23□□□□□ -1.41
SMG8-206ENST00000582469 PCID2Q5JVF3 399 aa6.23□□□□□ -1.41
SMG8-206ENST00000582469 DENND2CQ68D51 928 aa6.23□□□□□ -1.41
SMG8-206ENST00000582469 RASAL3Q86YV0 1011 aa6.23□□□□□ -1.41
SMG8-206ENST00000582469 ATG16L2Q8NAA4 619 aa6.23□□□□□ -1.41
SMG8-206ENST00000582469 VPS50Q96JG6 964 aa6.23□□□□□ -1.41
SMG8-206ENST00000582469 HERPUD2Q9BSE4 406 aa6.23□□□□□ -1.41
SMG8-206ENST00000582469 MAGEH1Q9H213 219 aa6.23□□□□□ -1.41
SMG8-206ENST00000582469 SNX15Q9NRS6 342 aa6.23□□□□□ -1.41
SMG8-206ENST00000582469 SEMA4GQ9NTN9 838 aa6.23□□□□□ -1.41
SMG8-206ENST00000582469 MGAT4CQ9UBM8 478 aa6.23□□□□□ -1.41
SMG8-206ENST00000582469 ADAM21Q9UKJ8 722 aa6.23□□□□□ -1.41
SMG8-206ENST00000582469 FANCIQ9NVI1 1328 aa6.23□□□□□ -1.41
SMG8-206ENST00000582469 KAT6AQ92794 2004 aa6.22□□□□□ -1.41
SMG8-206ENST00000582469 PNMA6EA0A0J9YXQ4 647 aa6.22□□□□□ -1.41
SMG8-206ENST00000582469 CES2O00748 559 aa6.22□□□□□ -1.41
SMG8-206ENST00000582469 TNFRSF6BO95407 300 aa6.22□□□□□ -1.41
SMG8-206ENST00000582469 ALDH18A1P54886 795 aaKnown RBP6.22□□□□□ -1.41
SMG8-206ENST00000582469 LMAN2Q12907 356 aa6.22□□□□□ -1.41
SMG8-206ENST00000582469 DHX8Q14562 1220 aaKnown RBP6.22□□□□□ -1.41
SMG8-206ENST00000582469 FAM153CQ494X1 144 aa6.22□□□□□ -1.41
SMG8-206ENST00000582469 TMEM196Q5HYL7 178 aa6.22□□□□□ -1.41
SMG8-206ENST00000582469 TMEM63BQ5T3F8 832 aa6.22□□□□□ -1.41
SMG8-206ENST00000582469 L1TD1Q5T7N2 865 aaKnown RBP6.22□□□□□ -1.41
SMG8-206ENST00000582469 LIN54Q6MZP7 749 aa6.22□□□□□ -1.41
SMG8-206ENST00000582469 CEP85Q6P2H3 762 aa6.22□□□□□ -1.41
SMG8-206ENST00000582469 PIK3AP1Q6ZUJ8 805 aa6.22□□□□□ -1.41
SMG8-206ENST00000582469 NRSN1Q8IZ57 195 aa6.22□□□□□ -1.41
SMG8-206ENST00000582469 FAM98AQ8NCA5 519 aaKnown RBP6.22□□□□□ -1.41
SMG8-206ENST00000582469 NGDNQ8NEJ9 315 aaKnown RBP6.22□□□□□ -1.41
SMG8-206ENST00000582469 SARAFQ96BY9 339 aa6.22□□□□□ -1.41
SMG8-206ENST00000582469 REPS1Q96D71 796 aa6.22□□□□□ -1.41
SMG8-206ENST00000582469 TMEM120AQ9BXJ8 343 aa6.22□□□□□ -1.41
SMG8-206ENST00000582469 TMPRSS5Q9H3S3 457 aa6.22□□□□□ -1.41
SMG8-206ENST00000582469 HERC5Q9UII4 1024 aaKnown RBP6.22□□□□□ -1.41
SMG8-206ENST00000582469 ASAP1Q9ULH1 1129 aa6.22□□□□□ -1.41
SMG8-206ENST00000582469 INSL6Q9Y581 213 aa6.22□□□□□ -1.41
SMG8-206ENST00000582469 CTIFO43310 598 aaKnown RBP6.21□□□□□ -1.42
SMG8-206ENST00000582469 NBNO60934 754 aa6.21□□□□□ -1.42
SMG8-206ENST00000582469 C1QL1O75973 258 aa6.21□□□□□ -1.42
SMG8-206ENST00000582469 CYP4F2P78329 520 aa6.21□□□□□ -1.42
SMG8-206ENST00000582469 GRM4Q14833 912 aa6.21□□□□□ -1.42
SMG8-206ENST00000582469 TSTD2Q5T7W7 516 aa6.21□□□□□ -1.42
SMG8-206ENST00000582469 MSANTD2Q6P1R3 559 aa6.21□□□□□ -1.42
SMG8-206ENST00000582469 SLC29A4Q7RTT9 530 aa6.21□□□□□ -1.42
SMG8-206ENST00000582469 OR1N1Q8NGS0 311 aa6.21□□□□□ -1.42
SMG8-206ENST00000582469 EDC3Q96F86 508 aaKnown RBP6.21□□□□□ -1.42
SMG8-206ENST00000582469 KAZALD1Q96I82 304 aa6.21□□□□□ -1.42
SMG8-206ENST00000582469 SNX18Q96RF0 628 aa6.21□□□□□ -1.42
SMG8-206ENST00000582469 KLK15Q9H2R5 256 aa6.21□□□□□ -1.42
SMG8-206ENST00000582469 PRDM13Q9H4Q3 707 aa6.21□□□□□ -1.42
SMG8-206ENST00000582469 LRFN1Q9P244 771 aa6.21□□□□□ -1.42
SMG8-206ENST00000582469 ARPP21Q9UBL0 812 aaPredicted RBP6.21□□□□□ -1.42
SMG8-206ENST00000582469 GRHPRQ9UBQ7 328 aa6.21□□□□□ -1.42
SMG8-206ENST00000582469 LPAR3Q9UBY5 353 aa6.21□□□□□ -1.42
SMG8-206ENST00000582469 COL11A2P13942 1736 aaPredicted RBP6.21□□□□□ -1.42
SMG8-206ENST00000582469 H7C1Q1 480 aa6.2□□□□□ -1.42
SMG8-206ENST00000582469 TRIM38O00635 465 aa6.2□□□□□ -1.42
SMG8-206ENST00000582469 DNPH1O43598 174 aa6.2□□□□□ -1.42
SMG8-206ENST00000582469 PIP5K1CO60331 668 aa6.2□□□□□ -1.42
SMG8-206ENST00000582469 JTBO76095 146 aa6.2□□□□□ -1.42
SMG8-206ENST00000582469 USP1O94782 785 aa6.2□□□□□ -1.42
SMG8-206ENST00000582469 ITGA2BP08514 1039 aa6.2□□□□□ -1.42
SMG8-206ENST00000582469 FPR3P25089 353 aa6.2□□□□□ -1.42
SMG8-206ENST00000582469 HALP42357 657 aa6.2□□□□□ -1.42
SMG8-206ENST00000582469 CDK7P50613 346 aa6.2□□□□□ -1.42
SMG8-206ENST00000582469 PNLIPRP1P54315 467 aa6.2□□□□□ -1.42
SMG8-206ENST00000582469 CSHL1Q14406 222 aa6.2□□□□□ -1.42
SMG8-206ENST00000582469 INO80DQ53TQ3 878 aaPredicted RBP6.2□□□□□ -1.42
SMG8-206ENST00000582469 CCDC144NLQ6NUI1 221 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms