RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 ZSCAN9O15535 394 aaPredicted RBP5.54□□□□□ -1.52
USP8-218ENST00000561330 PLA2G6O60733 806 aa5.54□□□□□ -1.52
USP8-218ENST00000561330 CHRM5P08912 532 aaPredicted RBP5.54□□□□□ -1.52
USP8-218ENST00000561330 PECAM1P16284 738 aaPredicted RBP5.54□□□□□ -1.52
USP8-218ENST00000561330 ZNF37AP17032 561 aaPredicted RBP5.54□□□□□ -1.52
USP8-218ENST00000561330 ABCB4P21439 1286 aa5.54□□□□□ -1.52
USP8-218ENST00000561330 PBX1P40424 430 aa5.54□□□□□ -1.52
USP8-218ENST00000561330 TXNL4AP83876 142 aaKnown RBP5.54□□□□□ -1.52
USP8-218ENST00000561330 NSUN2Q08J23 767 aaKnown RBP eCLIP5.54□□□□□ -1.52
USP8-218ENST00000561330 ATP1A4Q13733 1029 aa5.54□□□□□ -1.52
USP8-218ENST00000561330 UBE4AQ14139 1066 aa5.54□□□□□ -1.52
USP8-218ENST00000561330 BRD3Q15059 726 aa5.54□□□□□ -1.52
USP8-218ENST00000561330 ARHGAP15Q53QZ3 475 aa5.54□□□□□ -1.52
USP8-218ENST00000561330 TMEM65Q6PI78 240 aa5.54□□□□□ -1.52
USP8-218ENST00000561330 LINC01465Q8N7H1 131 aa5.54□□□□□ -1.52
USP8-218ENST00000561330 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.54□□□□□ -1.52
USP8-218ENST00000561330 FAM71DQ8N9W8 422 aa5.54□□□□□ -1.52
USP8-218ENST00000561330 MAFAQ8NHW3 353 aaPredicted RBP5.54□□□□□ -1.52
USP8-218ENST00000561330 HS6ST2Q96MM7 605 aa5.54□□□□□ -1.52
USP8-218ENST00000561330 WDR24Q96S15 920 aa5.54□□□□□ -1.52
USP8-218ENST00000561330 CINPQ9BW66 212 aaPredicted RBP5.54□□□□□ -1.52
USP8-218ENST00000561330 USP29Q9HBJ7 922 aa5.54□□□□□ -1.52
USP8-218ENST00000561330 NECTIN3Q9NQS3 549 aa5.54□□□□□ -1.52
USP8-218ENST00000561330 TM7SF3Q9NS93 570 aa5.54□□□□□ -1.52
USP8-218ENST00000561330 POLR2AP24928 1970 aaKnown RBP5.54□□□□□ -1.52
USP8-218ENST00000561330 CA12O43570 354 aa5.53□□□□□ -1.52
USP8-218ENST00000561330 USP1O94782 785 aa5.53□□□□□ -1.52
USP8-218ENST00000561330 SRGAP2BP0DMP2 458 aa5.53□□□□□ -1.52
USP8-218ENST00000561330 CFHR3Q02985 330 aa5.53□□□□□ -1.52
USP8-218ENST00000561330 SRSF4Q08170 494 aaKnown RBP5.53□□□□□ -1.52
USP8-218ENST00000561330 KIAA1614Q5VZ46 1190 aa5.53□□□□□ -1.52
USP8-218ENST00000561330 ARL6IP4Q66PJ3 421 aaKnown RBP5.53□□□□□ -1.52
USP8-218ENST00000561330 GRHL2Q6ISB3 625 aa5.53□□□□□ -1.52
USP8-218ENST00000561330 XRRA1Q6P2D8 792 aa5.53□□□□□ -1.52
USP8-218ENST00000561330 TLDC1Q6P9B6 456 aa5.53□□□□□ -1.52
USP8-218ENST00000561330 DCDC5Q6ZRR9 648 aa5.53□□□□□ -1.52
USP8-218ENST00000561330 MORC1Q86VD1 984 aa5.53□□□□□ -1.52
USP8-218ENST00000561330 SYTL1Q8IYJ3 562 aa5.53□□□□□ -1.52
USP8-218ENST00000561330 EDC3Q96F86 508 aaKnown RBP5.53□□□□□ -1.52
USP8-218ENST00000561330 GAR1Q9NY12 217 aaKnown RBP5.53□□□□□ -1.52
USP8-218ENST00000561330 SLC39A10Q9ULF5 831 aa5.53□□□□□ -1.52
USP8-218ENST00000561330 FRMD4BQ9Y2L6 1034 aa5.53□□□□□ -1.52
USP8-218ENST00000561330 OR2W5A6NFC9 320 aa5.52□□□□□ -1.53
USP8-218ENST00000561330 TMEM232C9JQI7 657 aa5.52□□□□□ -1.53
USP8-218ENST00000561330 VIPP01282 170 aa5.52□□□□□ -1.53
USP8-218ENST00000561330 CYP2D6P10635 497 aa5.52□□□□□ -1.53
USP8-218ENST00000561330 DRD1P21728 446 aa5.52□□□□□ -1.53
USP8-218ENST00000561330 PPM1AP35813 382 aa5.52□□□□□ -1.53
USP8-218ENST00000561330 TECP42680 631 aa5.52□□□□□ -1.53
USP8-218ENST00000561330 GPC5P78333 572 aa5.52□□□□□ -1.53
USP8-218ENST00000561330 CCDC15Q0P6D6 951 aa5.52□□□□□ -1.53
USP8-218ENST00000561330 LARS2Q15031 903 aaKnown RBP5.52□□□□□ -1.53
USP8-218ENST00000561330 RAB30Q15771 203 aa5.52□□□□□ -1.53
USP8-218ENST00000561330 AASDHQ4L235 1098 aaPredicted RBP5.52□□□□□ -1.53
USP8-218ENST00000561330 TMTC4Q5T4D3 741 aa5.52□□□□□ -1.53
USP8-218ENST00000561330 DDB2Q92466 427 aa5.52□□□□□ -1.53
USP8-218ENST00000561330 MUL1Q969V5 352 aa5.52□□□□□ -1.53
USP8-218ENST00000561330 NUDT22Q9BRQ3 303 aa5.52□□□□□ -1.53
USP8-218ENST00000561330 STK33Q9BYT3 514 aa5.52□□□□□ -1.53
USP8-218ENST00000561330 FLRT1Q9NZU1 646 aa5.52□□□□□ -1.53
USP8-218ENST00000561330 CA14Q9ULX7 337 aa5.52□□□□□ -1.53
USP8-218ENST00000561330 H3BNC9 293 aa5.51□□□□□ -1.53
USP8-218ENST00000561330 CLIC1O00299 241 aa5.51□□□□□ -1.53
USP8-218ENST00000561330 CBFA2T3O75081 653 aa5.51□□□□□ -1.53
USP8-218ENST00000561330 LATS1O95835 1130 aa5.51□□□□□ -1.53
USP8-218ENST00000561330 SETSIPP0DME0 302 aa5.51□□□□□ -1.53
USP8-218ENST00000561330 TMIGD3P0DMS9 266 aaPredicted RBP5.51□□□□□ -1.53
USP8-218ENST00000561330 CERS1P27544 350 aa5.51□□□□□ -1.53
USP8-218ENST00000561330 HTR3AP46098 478 aa5.51□□□□□ -1.53
USP8-218ENST00000561330 FOXF2Q12947 444 aa5.51□□□□□ -1.53
USP8-218ENST00000561330 BFSP2Q13515 415 aa5.51□□□□□ -1.53
USP8-218ENST00000561330 DNASE1L3Q13609 305 aa5.51□□□□□ -1.53
USP8-218ENST00000561330 KCNJ12Q14500 433 aa5.51□□□□□ -1.53
USP8-218ENST00000561330 KCNB1Q14721 858 aa5.51□□□□□ -1.53
USP8-218ENST00000561330 STARD3Q14849 445 aa5.51□□□□□ -1.53
USP8-218ENST00000561330 MFSD13AQ14CX5 517 aa5.51□□□□□ -1.53
USP8-218ENST00000561330 TMEM196Q5HYL7 178 aa5.51□□□□□ -1.53
USP8-218ENST00000561330 VSTM1Q6UX27 236 aa5.51□□□□□ -1.53
USP8-218ENST00000561330 TOGARAM2Q6ZUX3 1019 aa5.51□□□□□ -1.53
USP8-218ENST00000561330 TTC30AQ86WT1 665 aa5.51□□□□□ -1.53
USP8-218ENST00000561330 RASGRP3Q8IV61 690 aa5.51□□□□□ -1.53
USP8-218ENST00000561330 TMEM41AQ96HV5 264 aa5.51□□□□□ -1.53
USP8-218ENST00000561330 C5orf34Q96MH7 638 aa5.51□□□□□ -1.53
USP8-218ENST00000561330 SEMA4CQ9C0C4 833 aa5.51□□□□□ -1.53
USP8-218ENST00000561330 SAP30LQ9HAJ7 183 aa5.51□□□□□ -1.53
USP8-218ENST00000561330 VPS45Q9NRW7 570 aa5.51□□□□□ -1.53
USP8-218ENST00000561330 HELLSQ9NRZ9 838 aa5.51□□□□□ -1.53
USP8-218ENST00000561330 CDC23Q9UJX2 597 aa5.51□□□□□ -1.53
USP8-218ENST00000561330 FZD4Q9ULV1 537 aa5.51□□□□□ -1.53
USP8-218ENST00000561330 ARHGEF17Q96PE2 2063 aaPredicted RBP5.51□□□□□ -1.53
USP8-218ENST00000561330 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.5□□□□□ -1.53
USP8-218ENST00000561330 ADAMTS3O15072 1205 aa5.5□□□□□ -1.53
USP8-218ENST00000561330 PRAMEF2O60811 474 aa5.5□□□□□ -1.53
USP8-218ENST00000561330 CYP2A6P11509 494 aaPredicted RBP5.5□□□□□ -1.53
USP8-218ENST00000561330 SERPINB3P29508 390 aa5.5□□□□□ -1.53
USP8-218ENST00000561330 GSTM5P46439 218 aa5.5□□□□□ -1.53
USP8-218ENST00000561330 SEMA3BQ13214 749 aa5.5□□□□□ -1.53
USP8-218ENST00000561330 P3H1Q32P28 736 aa5.5□□□□□ -1.53
USP8-218ENST00000561330 COLEC12Q5KU26 742 aa5.5□□□□□ -1.53
USP8-218ENST00000561330 ZNF66Q6ZN08 573 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms