RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 NAGLUP54802 743 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 BNIP3Q12983 259 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 LPIN1Q14693 890 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 TSEN34Q9BSV6 310 aaKnown RBP3.8□□□□□ -1.8
ATXN3-248ENST00000558190 MSTO1Q9BUK6 570 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 QPCTLQ9NXS2 382 aa3.8□□□□□ -1.8
ATXN3-248ENST00000558190 ZNF682O95780 498 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 SNRPB2P08579 225 aaKnown RBP3.79□□□□□ -1.8
ATXN3-248ENST00000558190 PRKAA1Q13131 559 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 ZNF720Q7Z2F6 126 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 SNX20Q7Z614 316 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 CDC26Q8NHZ8 85 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 PDCD10Q9BUL8 212 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 EIF3LQ9Y262 564 aaKnown RBP3.79□□□□□ -1.8
ATXN3-248ENST00000558190 REXO2Q9Y3B8 237 aaKnown RBP3.79□□□□□ -1.8
ATXN3-248ENST00000558190 HFM1A2PYH4 1435 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 WDR97A6NE52 1622 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 HS6ST1O60243 411 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 FAM20BO75063 409 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 RASA1P20936 1047 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 MMP13P45452 471 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 SYDE2Q5VT97 1194 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 C11orf63Q6NUN7 778 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 MB21D2Q8IYB1 491 aaPredicted RBP3.79□□□□□ -1.8
ATXN3-248ENST00000558190 PRELID2Q8N945 189 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 MCFD2Q8NI22 146 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 TCF7L2Q9NQB0 619 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 POLR3BQ9NW08 1133 aaPredicted RBP3.79□□□□□ -1.8
ATXN3-248ENST00000558190 A0A0B4J269 797 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 TFECO14948 347 aaPredicted RBP3.79□□□□□ -1.8
ATXN3-248ENST00000558190 SLC9A3P48764 834 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 KCNQ4P56696 695 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 ATP13A4Q4VNC1 1196 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 KRT77Q7Z794 578 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 ZC3H7AQ8IWR0 971 aaKnown RBP3.79□□□□□ -1.8
ATXN3-248ENST00000558190 PTCD3Q96EY7 689 aaKnown RBP3.79□□□□□ -1.8
ATXN3-248ENST00000558190 CLN6Q9NWW5 311 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 DPP3Q9NY33 737 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 ATP6V1HQ9UI12 483 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 ABCC4O15439 1325 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 H0YIN7 160 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 TLR2O60603 784 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 THRBP10828 461 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 ELK3P41970 407 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 CLK3P49761 638 aaKnown RBP3.79□□□□□ -1.8
ATXN3-248ENST00000558190 OMDQ99983 421 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 DGKBQ9Y6T7 804 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 SH3TC1Q8TE82 1336 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 AVILO75366 819 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 TLDC1Q6P9B6 456 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 TBC1D21Q8IYX1 336 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 PARP8Q8N3A8 854 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 FAR1Q8WVX9 515 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 OTUD5Q96G74 571 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 DHRS1Q96LJ7 313 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 SAE1Q9UBE0 346 aaPredicted RBP3.79□□□□□ -1.8
ATXN3-248ENST00000558190 ATPIF1Q9UII2 106 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 GGA1Q9UJY5 639 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 S100A6P06703 90 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 RECQLP46063 649 aaPredicted RBP3.79□□□□□ -1.8
ATXN3-248ENST00000558190 SLC20A1Q8WUM9 679 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 CNPY3Q9BT09 278 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 C9orf16Q9BUW7 83 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 EBF3Q9H4W6 596 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 SNX8Q9Y5X2 465 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 POLR3AO14802 1390 aaPredicted RBP3.79□□□□□ -1.8
ATXN3-248ENST00000558190 SHOX2O60902 331 aaPredicted RBP3.79□□□□□ -1.8
ATXN3-248ENST00000558190 PSAPP07602 524 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 ABRAQ8N0Z2 381 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 PGBD4Q96DM1 585 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 TEKT5Q96M29 485 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 ZNF560Q96MR9 790 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 FABP12A6NFH5 140 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 FSCN2O14926 492 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 CCT8P50990 548 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 MZT2AQ6P582 158 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 TBC1D14Q9P2M4 693 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 LCP1P13796 627 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 SKIV2L2P42285 1042 aaKnown RBP3.79□□□□□ -1.8
ATXN3-248ENST00000558190 BCAP31P51572 246 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 NLRP11P59045 1033 aaKnown RBP3.79□□□□□ -1.8
ATXN3-248ENST00000558190 ATP2C1P98194 919 aaPredicted RBP3.79□□□□□ -1.8
ATXN3-248ENST00000558190 DEFA5Q01523 94 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 PPM1JQ5JR12 505 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 WDR59Q6PJI9 974 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 EFHD2Q96C19 240 aaPredicted RBP3.79□□□□□ -1.8
ATXN3-248ENST00000558190 DIRAS2Q96HU8 199 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 MIR1-1HGQ9H1L0 117 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 C5orf58C9J3I9 102 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 AXIN1O15169 862 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 PLOD3O60568 738 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 LBPP18428 481 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 COPZ1P61923 177 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 MSLNQ13421 630 aaPredicted RBP3.79□□□□□ -1.8
ATXN3-248ENST00000558190 KLHL12Q53G59 568 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 SCARA3Q6AZY7 606 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 ZNF410Q86VK4 478 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 RASAL3Q86YV0 1011 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 WDR55Q9H6Y2 383 aaPredicted RBP3.79□□□□□ -1.8
ATXN3-248ENST00000558190 RGS17Q9UGC6 210 aaPredicted RBP3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms