RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 VPS52Q8N1B4 723 aa11.34□□□□□ -0.59
PABPN1-203ENST00000553960 KIAA1958Q8N8K9 716 aa11.34□□□□□ -0.59
PABPN1-203ENST00000553960 ATAD1Q8NBU5 361 aa11.34□□□□□ -0.59
PABPN1-203ENST00000553960 LRRN4CLQ8ND94 238 aa11.34□□□□□ -0.59
PABPN1-203ENST00000553960 SLC35B2Q8TB61 432 aa11.34□□□□□ -0.59
PABPN1-203ENST00000553960 CLEC4CQ8WTT0 213 aa11.34□□□□□ -0.59
PABPN1-203ENST00000553960 SLC39A13Q96H72 371 aa11.34□□□□□ -0.59
PABPN1-203ENST00000553960 CFAP57Q96MR6 1250 aa11.34□□□□□ -0.59
PABPN1-203ENST00000553960 RNF157Q96PX1 679 aa11.34□□□□□ -0.59
PABPN1-203ENST00000553960 PEBP4Q96S96 227 aa11.34□□□□□ -0.59
PABPN1-203ENST00000553960 ADAM33Q9BZ11 813 aa11.34□□□□□ -0.59
PABPN1-203ENST00000553960 LMAN2LQ9H0V9 348 aa11.34□□□□□ -0.59
PABPN1-203ENST00000553960 ANKZF1Q9H8Y5 726 aa11.34□□□□□ -0.59
PABPN1-203ENST00000553960 GDF3Q9NR23 364 aa11.34□□□□□ -0.59
PABPN1-203ENST00000553960 ARHGEF38Q9NXL2 777 aa11.34□□□□□ -0.59
PABPN1-203ENST00000553960 STIM2Q9P246 746 aa11.34□□□□□ -0.59
PABPN1-203ENST00000553960 ZMYM5Q9UJ78 669 aa11.34□□□□□ -0.59
PABPN1-203ENST00000553960 FZD10Q9ULW2 581 aa11.34□□□□□ -0.59
PABPN1-203ENST00000553960 CDY1Q9Y6F8 540 aa11.34□□□□□ -0.59
PABPN1-203ENST00000553960 TMEM110-MUSTN1A8MSY1 372 aa11.33□□□□□ -0.6
PABPN1-203ENST00000553960 IRAK2O43187 625 aa11.33□□□□□ -0.6
PABPN1-203ENST00000553960 ATP8B1O43520 1251 aa11.33□□□□□ -0.6
PABPN1-203ENST00000553960 ITGAVP06756 1048 aa11.33□□□□□ -0.6
PABPN1-203ENST00000553960 USP17L7P0C7H9 530 aa11.33□□□□□ -0.6
PABPN1-203ENST00000553960 RALAP11233 206 aa11.33□□□□□ -0.6
PABPN1-203ENST00000553960 CPB1P15086 417 aa11.33□□□□□ -0.6
PABPN1-203ENST00000553960 TCF4P15884 667 aa11.33□□□□□ -0.6
PABPN1-203ENST00000553960 HMGA1P17096 107 aaKnown RBP11.33□□□□□ -0.6
PABPN1-203ENST00000553960 TGM2P21980 687 aa11.33□□□□□ -0.6
PABPN1-203ENST00000553960 ERVK-21P61565 698 aa11.33□□□□□ -0.6
PABPN1-203ENST00000553960 YWHAGP61981 247 aaKnown RBP eCLIP11.33□□□□□ -0.6
PABPN1-203ENST00000553960 XRCC4Q13426 336 aa11.33□□□□□ -0.6
PABPN1-203ENST00000553960 CUL1Q13616 776 aa11.33□□□□□ -0.6
PABPN1-203ENST00000553960 DPYSL3Q14195 570 aa11.33□□□□□ -0.6
PABPN1-203ENST00000553960 ARL13BQ3SXY8 428 aa11.33□□□□□ -0.6
PABPN1-203ENST00000553960 SYPL2Q5VXT5 272 aa11.33□□□□□ -0.6
PABPN1-203ENST00000553960 MFSD7Q6UXD7 560 aa11.33□□□□□ -0.6
PABPN1-203ENST00000553960 TADA2BQ86TJ2 420 aa11.33□□□□□ -0.6
PABPN1-203ENST00000553960 CEP57Q86XR8 500 aa11.33□□□□□ -0.6
PABPN1-203ENST00000553960 MRPL43Q8N983 215 aaKnown RBP11.33□□□□□ -0.6
PABPN1-203ENST00000553960 ATL2Q8NHH9 583 aa11.33□□□□□ -0.6
PABPN1-203ENST00000553960 CCHCR1Q8TD31 782 aa11.33□□□□□ -0.6
PABPN1-203ENST00000553960 GRK7Q8WTQ7 553 aa11.33□□□□□ -0.6
PABPN1-203ENST00000553960 RAPGEF5Q92565 580 aa11.33□□□□□ -0.6
PABPN1-203ENST00000553960 RTP4Q96DX8 246 aa11.33□□□□□ -0.6
PABPN1-203ENST00000553960 ABHD8Q96I13 439 aa11.33□□□□□ -0.6
PABPN1-203ENST00000553960 CAPZA3Q96KX2 299 aa11.33□□□□□ -0.6
PABPN1-203ENST00000553960 SERPINB11Q96P15 392 aa11.33□□□□□ -0.6
PABPN1-203ENST00000553960 GDF15Q99988 308 aa11.33□□□□□ -0.6
PABPN1-203ENST00000553960 SNRNP25Q9BV90 132 aaKnown RBP11.33□□□□□ -0.6
PABPN1-203ENST00000553960 BRD8Q9H0E9 1235 aa11.33□□□□□ -0.6
PABPN1-203ENST00000553960 PCDH18Q9HCL0 1135 aa11.33□□□□□ -0.6
PABPN1-203ENST00000553960 TLR8Q9NR97 1041 aaKnown RBP11.33□□□□□ -0.6
PABPN1-203ENST00000553960 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.33□□□□□ -0.6
PABPN1-203ENST00000553960 ABI2Q9NYB9 513 aaPredicted RBP11.33□□□□□ -0.6
PABPN1-203ENST00000553960 DONSONQ9NYP3 566 aa11.33□□□□□ -0.6
PABPN1-203ENST00000553960 UXTQ9UBK9 157 aaPredicted RBP11.33□□□□□ -0.6
PABPN1-203ENST00000553960 TLR6Q9Y2C9 796 aa11.33□□□□□ -0.6
PABPN1-203ENST00000553960 NEU2Q9Y3R4 380 aa11.33□□□□□ -0.6
PABPN1-203ENST00000553960 DENND4CQ5VZ89 1909 aa11.33□□□□□ -0.6
PABPN1-203ENST00000553960 CLUHO75153 1309 aa11.33□□□□□ -0.6
PABPN1-203ENST00000553960 PLXNA4Q9HCM2 1894 aa11.32□□□□□ -0.6
PABPN1-203ENST00000553960 LINC01553A4QN01 128 aa11.32□□□□□ -0.6
PABPN1-203ENST00000553960 KCNU1A8MYU2 1149 aa11.32□□□□□ -0.6
PABPN1-203ENST00000553960 TLL1O43897 1013 aa11.32□□□□□ -0.6
PABPN1-203ENST00000553960 ATF6P18850 670 aa11.32□□□□□ -0.6
PABPN1-203ENST00000553960 STIP1P31948 543 aaKnown RBP11.32□□□□□ -0.6
PABPN1-203ENST00000553960 COILP38432 576 aaPredicted RBP11.32□□□□□ -0.6
PABPN1-203ENST00000553960 PTGIRP43119 386 aa11.32□□□□□ -0.6
PABPN1-203ENST00000553960 EPHA5P54756 1037 aa11.32□□□□□ -0.6
PABPN1-203ENST00000553960 DUSP4Q13115 394 aa11.32□□□□□ -0.6
PABPN1-203ENST00000553960 OASLQ15646 514 aaKnown RBP11.32□□□□□ -0.6
PABPN1-203ENST00000553960 C15orf59Q2T9L4 293 aaPredicted RBP11.32□□□□□ -0.6
PABPN1-203ENST00000553960 PABPC1LQ4VXU2 614 aaKnown RBP11.32□□□□□ -0.6
PABPN1-203ENST00000553960 ARTNQ5T4W7 220 aa11.32□□□□□ -0.6
PABPN1-203ENST00000553960 MANEALQ5VSG8 457 aa11.32□□□□□ -0.6
PABPN1-203ENST00000553960 DUPD1Q68J44 220 aa11.32□□□□□ -0.6
PABPN1-203ENST00000553960 TXNRD3NBQ6F5E7 133 aa11.32□□□□□ -0.6
PABPN1-203ENST00000553960 PRSS55Q6UWB4 352 aaPredicted RBP11.32□□□□□ -0.6
PABPN1-203ENST00000553960 C4orf22Q6V702 233 aa11.32□□□□□ -0.6
PABPN1-203ENST00000553960 CCDC149Q6ZUS6 474 aa11.32□□□□□ -0.6
PABPN1-203ENST00000553960 HFE2Q6ZVN8 426 aa11.32□□□□□ -0.6
PABPN1-203ENST00000553960 BZW1Q7L1Q6 419 aaKnown RBP11.32□□□□□ -0.6
PABPN1-203ENST00000553960 LRRC49Q8IUZ0 686 aa11.32□□□□□ -0.6
PABPN1-203ENST00000553960 SCAMP5Q8TAC9 235 aa11.32□□□□□ -0.6
PABPN1-203ENST00000553960 SPPL3Q8TCT6 385 aa11.32□□□□□ -0.6
PABPN1-203ENST00000553960 DQX1Q8TE96 717 aaKnown RBP11.32□□□□□ -0.6
PABPN1-203ENST00000553960 FATE1Q969F0 183 aa11.32□□□□□ -0.6
PABPN1-203ENST00000553960 FAM149B1Q96BN6 582 aa11.32□□□□□ -0.6
PABPN1-203ENST00000553960 PSMB7Q99436 277 aa11.32□□□□□ -0.6
PABPN1-203ENST00000553960 DCLK3Q9C098 648 aa11.32□□□□□ -0.6
PABPN1-203ENST00000553960 PHACTR1Q9C0D0 580 aa11.32□□□□□ -0.6
PABPN1-203ENST00000553960 CRISPLD1Q9H336 500 aa11.32□□□□□ -0.6
PABPN1-203ENST00000553960 PLEKHA4Q9H4M7 779 aa11.32□□□□□ -0.6
PABPN1-203ENST00000553960 HBS1LQ9Y450 684 aaKnown RBP11.32□□□□□ -0.6
PABPN1-203ENST00000553960 NR2E1Q9Y466 385 aa11.32□□□□□ -0.6
PABPN1-203ENST00000553960 ANAPC1Q9H1A4 1944 aa11.31□□□□□ -0.6
PABPN1-203ENST00000553960 LRRD1A4D1F6 860 aa11.31□□□□□ -0.6
PABPN1-203ENST00000553960 CFAP69A5D8W1 941 aa11.31□□□□□ -0.6
PABPN1-203ENST00000553960 WASH4PA8MWX3 477 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms