RNA–Protein interactions for RNA: ENST00000553300.5

HNRNPC-205, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-205ENST00000553300 UBE2TQ9NPD8 197 aaPredicted RBP13.8□□□□□ -0.2
HNRNPC-205ENST00000553300 ARHGEF4Q9NR80 690 aa13.8□□□□□ -0.2
HNRNPC-205ENST00000553300 ABCC13Q9NSE7 274 aa13.8□□□□□ -0.2
HNRNPC-205ENST00000553300 LMBRD1Q9NUN5 540 aa13.8□□□□□ -0.2
HNRNPC-205ENST00000553300 MARK1Q9P0L2 795 aa13.8□□□□□ -0.2
HNRNPC-205ENST00000553300 EBF1Q9UH73 591 aa13.8□□□□□ -0.2
HNRNPC-205ENST00000553300 GMEB2Q9UKD1 530 aa13.8□□□□□ -0.2
HNRNPC-205ENST00000553300 NUDT5Q9UKK9 219 aa13.8□□□□□ -0.2
HNRNPC-205ENST00000553300 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.8□□□□□ -0.2
HNRNPC-205ENST00000553300 GOLGA6L22H0YM25 854 aa13.79□□□□□ -0.2
HNRNPC-205ENST00000553300 RNF225M0QZC1 329 aaPredicted RBP13.79□□□□□ -0.2
HNRNPC-205ENST00000553300 MED7O43513 233 aa13.79□□□□□ -0.2
HNRNPC-205ENST00000553300 HRO43593 1189 aa13.79□□□□□ -0.2
HNRNPC-205ENST00000553300 STC2O76061 302 aa13.79□□□□□ -0.2
HNRNPC-205ENST00000553300 APBB3O95704 486 aa13.79□□□□□ -0.2
HNRNPC-205ENST00000553300 MTIF2P46199 727 aaKnown RBP13.79□□□□□ -0.2
HNRNPC-205ENST00000553300 SLC6A11P48066 632 aa13.79□□□□□ -0.2
HNRNPC-205ENST00000553300 DMWDQ09019 674 aa13.79□□□□□ -0.2
HNRNPC-205ENST00000553300 ADIGQ0VDE8 80 aa13.79□□□□□ -0.2
HNRNPC-205ENST00000553300 EFEMP1Q12805 493 aa13.79□□□□□ -0.2
HNRNPC-205ENST00000553300 DMC1Q14565 340 aa13.79□□□□□ -0.2
HNRNPC-205ENST00000553300 EXOC3L4Q17RC7 722 aa13.79□□□□□ -0.2
HNRNPC-205ENST00000553300 HEATR6Q6AI08 1181 aaKnown RBP13.79□□□□□ -0.2
HNRNPC-205ENST00000553300 TRIM65Q6PJ69 517 aa13.79□□□□□ -0.2
HNRNPC-205ENST00000553300 Q6ZNB5 142 aa13.79□□□□□ -0.2
HNRNPC-205ENST00000553300 TMEM25Q86YD3 366 aa13.79□□□□□ -0.2
HNRNPC-205ENST00000553300 MIB1Q86YT6 1006 aa13.79□□□□□ -0.2
HNRNPC-205ENST00000553300 IRF2BP1Q8IU81 584 aa13.79□□□□□ -0.2
HNRNPC-205ENST00000553300 ARHGEF19Q8IW93 802 aa13.79□□□□□ -0.2
HNRNPC-205ENST00000553300 ETFBKMTQ8IXQ9 262 aa13.79□□□□□ -0.2
HNRNPC-205ENST00000553300 RNF139Q8WU17 664 aa13.79□□□□□ -0.2
HNRNPC-205ENST00000553300 IRGQQ8WZA9 623 aa13.79□□□□□ -0.2
HNRNPC-205ENST00000553300 TFAP2BQ92481 460 aa13.79□□□□□ -0.2
HNRNPC-205ENST00000553300 KAT5Q92993 513 aa13.79□□□□□ -0.2
HNRNPC-205ENST00000553300 KREMEN1Q96MU8 473 aa13.79□□□□□ -0.2
HNRNPC-205ENST00000553300 MED15Q96RN5 788 aa13.79□□□□□ -0.2
HNRNPC-205ENST00000553300 MARCH2Q9P0N8 246 aa13.79□□□□□ -0.2
HNRNPC-205ENST00000553300 RASAL2Q9UJF2 1139 aa13.79□□□□□ -0.2
HNRNPC-205ENST00000553300 TBC1D3BA6NDS4 549 aa13.78□□□□□ -0.2
HNRNPC-205ENST00000553300 M0QYV0 167 aa13.78□□□□□ -0.2
HNRNPC-205ENST00000553300 TULP2O00295 520 aa13.78□□□□□ -0.2
HNRNPC-205ENST00000553300 MDM4O15151 490 aa13.78□□□□□ -0.2
HNRNPC-205ENST00000553300 CACNG3O60359 315 aa13.78□□□□□ -0.2
HNRNPC-205ENST00000553300 LRP3O75074 770 aa13.78□□□□□ -0.2
HNRNPC-205ENST00000553300 TULP3O75386 442 aa13.78□□□□□ -0.2
HNRNPC-205ENST00000553300 FBXO21O94952 628 aa13.78□□□□□ -0.2
HNRNPC-205ENST00000553300 KRT5P13647 590 aa13.78□□□□□ -0.2
HNRNPC-205ENST00000553300 DGKEP52429 567 aa13.78□□□□□ -0.2
HNRNPC-205ENST00000553300 C2orf27AQ580R0 203 aa13.78□□□□□ -0.2
HNRNPC-205ENST00000553300 BSPRYQ5W0U4 402 aa13.78□□□□□ -0.2
HNRNPC-205ENST00000553300 PRR23BQ6ZRT6 265 aa13.78□□□□□ -0.2
HNRNPC-205ENST00000553300 CEP68Q76N32 757 aa13.78□□□□□ -0.2
HNRNPC-205ENST00000553300 TRMT11Q7Z4G4 463 aaKnown RBP13.78□□□□□ -0.2
HNRNPC-205ENST00000553300 GOLGA1Q92805 767 aa13.78□□□□□ -0.2
HNRNPC-205ENST00000553300 WBP2Q969T9 261 aa13.78□□□□□ -0.2
HNRNPC-205ENST00000553300 PLD4Q96BZ4 506 aa13.78□□□□□ -0.2
HNRNPC-205ENST00000553300 BBS2Q9BXC9 721 aa13.78□□□□□ -0.2
HNRNPC-205ENST00000553300 APEX2Q9UBZ4 518 aa13.78□□□□□ -0.2
HNRNPC-205ENST00000553300 MMP17Q9ULZ9 603 aa13.78□□□□□ -0.2
HNRNPC-205ENST00000553300 STARD13Q9Y3M8 1113 aa13.78□□□□□ -0.2
HNRNPC-205ENST00000553300 HBS1LQ9Y450 684 aaKnown RBP13.78□□□□□ -0.2
HNRNPC-205ENST00000553300 MYO18AQ92614 2054 aaKnown RBP13.77□□□□□ -0.2
HNRNPC-205ENST00000553300 AXIN1O15169 862 aa13.77□□□□□ -0.21
HNRNPC-205ENST00000553300 SART1O43290 800 aaKnown RBP13.77□□□□□ -0.21
HNRNPC-205ENST00000553300 RPP40O75818 363 aaKnown RBP13.77□□□□□ -0.21
HNRNPC-205ENST00000553300 RETP07949 1114 aa13.77□□□□□ -0.21
HNRNPC-205ENST00000553300 TYRP14679 529 aa13.77□□□□□ -0.21
HNRNPC-205ENST00000553300 BRD2P25440 801 aaKnown RBP13.77□□□□□ -0.21
HNRNPC-205ENST00000553300 DAOAP59103 153 aa13.77□□□□□ -0.21
HNRNPC-205ENST00000553300 MAN2A1Q16706 1144 aa13.77□□□□□ -0.21
HNRNPC-205ENST00000553300 DPCR1Q3MIW9 517 aa13.77□□□□□ -0.21
HNRNPC-205ENST00000553300 EOGTQ5NDL2 527 aa13.77□□□□□ -0.21
HNRNPC-205ENST00000553300 PMF1Q6P1K2 205 aa13.77□□□□□ -0.21
HNRNPC-205ENST00000553300 CACNA2D4Q7Z3S7 1137 aa13.77□□□□□ -0.21
HNRNPC-205ENST00000553300 C12orf40Q86WS4 652 aa13.77□□□□□ -0.21
HNRNPC-205ENST00000553300 PHTF2Q8N3S3 785 aa13.77□□□□□ -0.21
HNRNPC-205ENST00000553300 NAT16Q8N8M0 369 aa13.77□□□□□ -0.21
HNRNPC-205ENST00000553300 TERB1Q8NA31 727 aa13.77□□□□□ -0.21
HNRNPC-205ENST00000553300 TSTD1Q8NFU3 115 aa13.77□□□□□ -0.21
HNRNPC-205ENST00000553300 STK32AQ8WU08 396 aa13.77□□□□□ -0.21
HNRNPC-205ENST00000553300 GAB3Q8WWW8 586 aa13.77□□□□□ -0.21
HNRNPC-205ENST00000553300 CRACR2AQ9BSW2 395 aa13.77□□□□□ -0.21
HNRNPC-205ENST00000553300 SPAG17Q6Q759 2223 aa13.77□□□□□ -0.21
HNRNPC-205ENST00000553300 KIAA1549LQ6ZVL6 1849 aa13.77□□□□□ -0.21
HNRNPC-205ENST00000553300 SLC12A8A0AV02 714 aa13.76□□□□□ -0.21
HNRNPC-205ENST00000553300 YJEFN3A6XGL0 299 aa13.76□□□□□ -0.21
HNRNPC-205ENST00000553300 E7ENQ6 273 aa13.76□□□□□ -0.21
HNRNPC-205ENST00000553300 NEDD8-MDP1E9PL57 170 aa13.76□□□□□ -0.21
HNRNPC-205ENST00000553300 FOXD2O60548 495 aaPredicted RBP13.76□□□□□ -0.21
HNRNPC-205ENST00000553300 ALDH1A2O94788 518 aa13.76□□□□□ -0.21
HNRNPC-205ENST00000553300 CYBBP04839 570 aa13.76□□□□□ -0.21
HNRNPC-205ENST00000553300 LCP1P13796 627 aa13.76□□□□□ -0.21
HNRNPC-205ENST00000553300 PON1P27169 355 aa13.76□□□□□ -0.21
HNRNPC-205ENST00000553300 GPD2P43304 727 aa13.76□□□□□ -0.21
HNRNPC-205ENST00000553300 KIR2DL1P43626 348 aaPredicted RBP13.76□□□□□ -0.21
HNRNPC-205ENST00000553300 ACADSBP45954 432 aa13.76□□□□□ -0.21
HNRNPC-205ENST00000553300 RPL34P49207 117 aaKnown RBP13.76□□□□□ -0.21
HNRNPC-205ENST00000553300 HARS2P49590 506 aaKnown RBP13.76□□□□□ -0.21
HNRNPC-205ENST00000553300 SEC13P55735 322 aa13.76□□□□□ -0.21
HNRNPC-205ENST00000553300 ZNF445P59923 1031 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms