RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 NEBLO76041 1014 aa14.17□□□□□ -0.14
PRPF40B-209ENST00000548825 MLH1P40692 756 aa14.17□□□□□ -0.14
PRPF40B-209ENST00000548825 SERPINB4P48594 390 aa14.17□□□□□ -0.14
PRPF40B-209ENST00000548825 NDUFV1P49821 464 aa14.17□□□□□ -0.14
PRPF40B-209ENST00000548825 MUM1Q2TAK8 710 aa14.17□□□□□ -0.14
PRPF40B-209ENST00000548825 EFHC2Q5JST6 749 aa14.17□□□□□ -0.14
PRPF40B-209ENST00000548825 SWT1Q5T5J6 900 aaKnown RBP14.17□□□□□ -0.14
PRPF40B-209ENST00000548825 SPNS2Q8IVW8 549 aa14.17□□□□□ -0.14
PRPF40B-209ENST00000548825 RIBC1Q8N443 379 aaPredicted RBP14.17□□□□□ -0.14
PRPF40B-209ENST00000548825 FAM13CQ8NE31 585 aa14.17□□□□□ -0.14
PRPF40B-209ENST00000548825 CFAP61Q8NHU2 1237 aa14.17□□□□□ -0.14
PRPF40B-209ENST00000548825 DCAKDQ8WVC6 231 aa14.17□□□□□ -0.14
PRPF40B-209ENST00000548825 PGBD4Q96DM1 585 aa14.17□□□□□ -0.14
PRPF40B-209ENST00000548825 PCDH18Q9HCL0 1135 aa14.17□□□□□ -0.14
PRPF40B-209ENST00000548825 SLC24A2Q9UI40 661 aa14.17□□□□□ -0.14
PRPF40B-209ENST00000548825 AP4E1Q9UPM8 1137 aa14.17□□□□□ -0.14
PRPF40B-209ENST00000548825 FARP1Q9Y4F1 1045 aaPredicted RBP14.17□□□□□ -0.14
PRPF40B-209ENST00000548825 KIF13BQ9NQT8 1826 aa14.17□□□□□ -0.14
PRPF40B-209ENST00000548825 C2CD4BA6NLJ0 364 aa14.17□□□□□ -0.14
PRPF40B-209ENST00000548825 TYROBPO43914 113 aa14.17□□□□□ -0.14
PRPF40B-209ENST00000548825 RECQL4O94761 1208 aa14.17□□□□□ -0.14
PRPF40B-209ENST00000548825 ZWINTO95229 277 aa14.17□□□□□ -0.14
PRPF40B-209ENST00000548825 OAS1P00973 400 aaKnown RBP14.17□□□□□ -0.14
PRPF40B-209ENST00000548825 YWHAZP63104 245 aaKnown RBP14.17□□□□□ -0.14
PRPF40B-209ENST00000548825 FAM47CQ5HY64 1035 aa14.17□□□□□ -0.14
PRPF40B-209ENST00000548825 TWF2Q6IBS0 349 aaKnown RBP14.17□□□□□ -0.14
PRPF40B-209ENST00000548825 PID1Q7Z2X4 250 aa14.17□□□□□ -0.14
PRPF40B-209ENST00000548825 UTP4Q969X6 686 aaKnown RBP14.17□□□□□ -0.14
PRPF40B-209ENST00000548825 GRAMD1AQ96CP6 724 aa14.17□□□□□ -0.14
PRPF40B-209ENST00000548825 RBBP6Q7Z6E9 1792 aaKnown RBP14.17□□□□□ -0.14
PRPF40B-209ENST00000548825 ABHD2P08910 425 aa14.17□□□□□ -0.14
PRPF40B-209ENST00000548825 CSH1P0DML2 217 aa14.17□□□□□ -0.14
PRPF40B-209ENST00000548825 CSH2P0DML3 217 aa14.17□□□□□ -0.14
PRPF40B-209ENST00000548825 TPH1P17752 444 aa14.17□□□□□ -0.14
PRPF40B-209ENST00000548825 BEX3Q00994 111 aa14.17□□□□□ -0.14
PRPF40B-209ENST00000548825 CDCA2Q69YH5 1023 aaPredicted RBP14.17□□□□□ -0.14
PRPF40B-209ENST00000548825 PPP1R2P3Q6NXS1 205 aa14.17□□□□□ -0.14
PRPF40B-209ENST00000548825 DENND1AQ8TEH3 1009 aa14.17□□□□□ -0.14
PRPF40B-209ENST00000548825 STMN2Q93045 179 aa14.17□□□□□ -0.14
PRPF40B-209ENST00000548825 ZFP42Q96MM3 310 aa14.17□□□□□ -0.14
PRPF40B-209ENST00000548825 TTC1Q99614 292 aa14.17□□□□□ -0.14
PRPF40B-209ENST00000548825 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.17□□□□□ -0.14
PRPF40B-209ENST00000548825 A0A1B0GUA9 196 aa14.16□□□□□ -0.14
PRPF40B-209ENST00000548825 GNL1P36915 607 aaPredicted RBP14.16□□□□□ -0.14
PRPF40B-209ENST00000548825 ARL4AP40617 200 aa14.16□□□□□ -0.14
PRPF40B-209ENST00000548825 SULT1E1P49888 294 aa14.16□□□□□ -0.14
PRPF40B-209ENST00000548825 EPHB1P54762 984 aa14.16□□□□□ -0.14
PRPF40B-209ENST00000548825 AQP5P55064 265 aa14.16□□□□□ -0.14
PRPF40B-209ENST00000548825 ADIGQ0VDE8 80 aa14.16□□□□□ -0.14
PRPF40B-209ENST00000548825 PEX6Q13608 980 aa14.16□□□□□ -0.14
PRPF40B-209ENST00000548825 NOMO1Q15155 1222 aa14.16□□□□□ -0.14
PRPF40B-209ENST00000548825 SOWAHAQ2M3V2 549 aa14.16□□□□□ -0.14
PRPF40B-209ENST00000548825 ANKRD20A2Q5SQ80 823 aa14.16□□□□□ -0.14
PRPF40B-209ENST00000548825 ANKRD20A1Q5TYW2 823 aa14.16□□□□□ -0.14
PRPF40B-209ENST00000548825 DSTYKQ6XUX3 929 aa14.16□□□□□ -0.14
PRPF40B-209ENST00000548825 EDEM1Q92611 657 aa14.16□□□□□ -0.14
PRPF40B-209ENST00000548825 FGD4Q96M96 766 aa14.16□□□□□ -0.14
PRPF40B-209ENST00000548825 NMUR2Q9GZQ4 415 aa14.16□□□□□ -0.14
PRPF40B-209ENST00000548825 SIK2Q9H0K1 926 aa14.16□□□□□ -0.14
PRPF40B-209ENST00000548825 PTPRHQ9HD43 1115 aa14.16□□□□□ -0.14
PRPF40B-209ENST00000548825 SENP1Q9P0U3 644 aa14.16□□□□□ -0.14
PRPF40B-209ENST00000548825 INPP5FQ9Y2H2 1132 aa14.16□□□□□ -0.14
PRPF40B-209ENST00000548825 FIS1Q9Y3D6 152 aa14.16□□□□□ -0.14
PRPF40B-209ENST00000548825 STARD13Q9Y3M8 1113 aa14.16□□□□□ -0.14
PRPF40B-209ENST00000548825 TSPAN1O60635 241 aa14.16□□□□□ -0.14
PRPF40B-209ENST00000548825 CNMDO75829 334 aa14.16□□□□□ -0.14
PRPF40B-209ENST00000548825 NCF2P19878 526 aaPredicted RBP14.16□□□□□ -0.14
PRPF40B-209ENST00000548825 RASSF2P50749 326 aa14.16□□□□□ -0.14
PRPF40B-209ENST00000548825 TNFAIP2Q03169 654 aa14.16□□□□□ -0.14
PRPF40B-209ENST00000548825 BST1Q10588 318 aa14.16□□□□□ -0.14
PRPF40B-209ENST00000548825 CLNKQ7Z7G1 428 aa14.16□□□□□ -0.14
PRPF40B-209ENST00000548825 AGGF1Q8N302 714 aaeCLIP14.16□□□□□ -0.14
PRPF40B-209ENST00000548825 UBR7Q8N806 425 aa14.16□□□□□ -0.14
PRPF40B-209ENST00000548825 CMASQ8NFW8 434 aaPredicted RBP14.16□□□□□ -0.14
PRPF40B-209ENST00000548825 C10orf82Q8WW14 230 aa14.16□□□□□ -0.14
PRPF40B-209ENST00000548825 CPSF2Q9P2I0 782 aaKnown RBP14.16□□□□□ -0.14
PRPF40B-209ENST00000548825 PRKAG3Q9UGI9 489 aa14.16□□□□□ -0.14
PRPF40B-209ENST00000548825 C15orf41Q9Y2V0 281 aa14.16□□□□□ -0.14
PRPF40B-209ENST00000548825 SNX10Q9Y5X0 201 aa14.16□□□□□ -0.14
PRPF40B-209ENST00000548825 B2RBV5 119 aa14.15□□□□□ -0.14
PRPF40B-209ENST00000548825 ERVK-10P10266 1014 aa14.15□□□□□ -0.14
PRPF40B-209ENST00000548825 PAX7P23759 505 aa14.15□□□□□ -0.14
PRPF40B-209ENST00000548825 EDNRBP24530 442 aa14.15□□□□□ -0.14
PRPF40B-209ENST00000548825 STIP1P31948 543 aaKnown RBP14.15□□□□□ -0.14
PRPF40B-209ENST00000548825 PPM1JQ5JR12 505 aa14.15□□□□□ -0.14
PRPF40B-209ENST00000548825 RNF43Q68DV7 783 aa14.15□□□□□ -0.14
PRPF40B-209ENST00000548825 PLPPR4Q7Z2D5 763 aa14.15□□□□□ -0.14
PRPF40B-209ENST00000548825 AZIN2Q96A70 460 aa14.15□□□□□ -0.14
PRPF40B-209ENST00000548825 TBCBQ99426 244 aa14.15□□□□□ -0.14
PRPF40B-209ENST00000548825 DENND2DQ9H6A0 471 aaPredicted RBP14.15□□□□□ -0.14
PRPF40B-209ENST00000548825 LRRC4Q9HBW1 653 aa14.15□□□□□ -0.14
PRPF40B-209ENST00000548825 ARHGEF3Q9NR81 526 aa14.15□□□□□ -0.14
PRPF40B-209ENST00000548825 ZNF358Q9NW07 568 aa14.15□□□□□ -0.14
PRPF40B-209ENST00000548825 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.15□□□□□ -0.14
PRPF40B-209ENST00000548825 PAK5Q9P286 719 aa14.15□□□□□ -0.14
PRPF40B-209ENST00000548825 NUDT5Q9UKK9 219 aa14.15□□□□□ -0.14
PRPF40B-209ENST00000548825 ZMPSTE24O75844 475 aa14.15□□□□□ -0.14
PRPF40B-209ENST00000548825 SLC25A27O95847 323 aa14.15□□□□□ -0.14
PRPF40B-209ENST00000548825 MGAT1P26572 445 aa14.15□□□□□ -0.14
PRPF40B-209ENST00000548825 SLC10A2Q12908 348 aaPredicted RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms