RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 CACUL1Q86Y37 369 aa14.73□□□□□ -0.05
NKX3-1-202ENST00000523261 RFFLQ8WZ73 363 aa14.73□□□□□ -0.05
NKX3-1-202ENST00000523261 ZNF578Q96N58 590 aaPredicted RBP14.73□□□□□ -0.05
NKX3-1-202ENST00000523261 TMEM30AQ9NV96 361 aa14.73□□□□□ -0.05
NKX3-1-202ENST00000523261 MARK1Q9P0L2 795 aa14.73□□□□□ -0.05
NKX3-1-202ENST00000523261 WDR35Q9P2L0 1181 aa14.73□□□□□ -0.05
NKX3-1-202ENST00000523261 AGO2Q9UKV8 859 aaKnown RBP14.73□□□□□ -0.05
NKX3-1-202ENST00000523261 CDH9Q9ULB4 789 aa14.73□□□□□ -0.05
NKX3-1-202ENST00000523261 MYH10P35580 1976 aa14.73□□□□□ -0.05
NKX3-1-202ENST00000523261 ANKRD17O75179 2603 aaKnown RBP14.72□□□□□ -0.05
NKX3-1-202ENST00000523261 K7ENM7 598 aa14.72□□□□□ -0.05
NKX3-1-202ENST00000523261 GREM1O60565 184 aa14.72□□□□□ -0.05
NKX3-1-202ENST00000523261 IL18RAPO95256 599 aa14.72□□□□□ -0.05
NKX3-1-202ENST00000523261 IRF1P10914 325 aa14.72□□□□□ -0.05
NKX3-1-202ENST00000523261 ACADMP11310 421 aa14.72□□□□□ -0.05
NKX3-1-202ENST00000523261 PLCG1P19174 1290 aa14.72□□□□□ -0.05
NKX3-1-202ENST00000523261 ACSL1P33121 698 aa14.72□□□□□ -0.05
NKX3-1-202ENST00000523261 SLC12A3P55017 1021 aa14.72□□□□□ -0.05
NKX3-1-202ENST00000523261 TFAMQ00059 246 aaKnown RBP14.72□□□□□ -0.05
NKX3-1-202ENST00000523261 CYP27A1Q02318 531 aa14.72□□□□□ -0.05
NKX3-1-202ENST00000523261 MAPRE1Q15691 268 aaKnown RBP14.72□□□□□ -0.05
NKX3-1-202ENST00000523261 ARSHQ5FYA8 562 aa14.72□□□□□ -0.05
NKX3-1-202ENST00000523261 PRAMEF14Q5SWL7 426 aa14.72□□□□□ -0.05
NKX3-1-202ENST00000523261 DHX40Q8IX18 779 aaKnown RBP14.72□□□□□ -0.05
NKX3-1-202ENST00000523261 DCBLD1Q8N8Z6 715 aa14.72□□□□□ -0.05
NKX3-1-202ENST00000523261 NSUN7Q8NE18 718 aaKnown RBP14.72□□□□□ -0.05
NKX3-1-202ENST00000523261 SAP25Q8TEE9 199 aa14.72□□□□□ -0.05
NKX3-1-202ENST00000523261 KBTBD7Q8WVZ9 684 aa14.72□□□□□ -0.05
NKX3-1-202ENST00000523261 BIRC7Q96CA5 298 aa14.72□□□□□ -0.05
NKX3-1-202ENST00000523261 PCED1BQ96HM7 432 aa14.72□□□□□ -0.05
NKX3-1-202ENST00000523261 ORAI3Q9BRQ5 295 aa14.72□□□□□ -0.05
NKX3-1-202ENST00000523261 RAB34Q9BZG1 259 aa14.72□□□□□ -0.05
NKX3-1-202ENST00000523261 KCND2Q9NZV8 630 aa14.72□□□□□ -0.05
NKX3-1-202ENST00000523261 THAP10Q9P2Z0 257 aaPredicted RBP14.72□□□□□ -0.05
NKX3-1-202ENST00000523261 CLCA2Q9UQC9 943 aa14.72□□□□□ -0.05
NKX3-1-202ENST00000523261 HEMK1Q9Y5R4 338 aaPredicted RBP14.72□□□□□ -0.05
NKX3-1-202ENST00000523261 STYXL1Q9Y6J8 313 aa14.72□□□□□ -0.05
NKX3-1-202ENST00000523261 TLN1Q9Y490 2541 aaKnown RBP14.71□□□□□ -0.05
NKX3-1-202ENST00000523261 REC8O95072 547 aa14.71□□□□□ -0.05
NKX3-1-202ENST00000523261 GP1BBP13224 206 aa14.71□□□□□ -0.05
NKX3-1-202ENST00000523261 ACO1P21399 889 aaKnown RBP14.71□□□□□ -0.05
NKX3-1-202ENST00000523261 CD27P26842 260 aa14.71□□□□□ -0.05
NKX3-1-202ENST00000523261 CACNA2D1P54289 1103 aa14.71□□□□□ -0.05
NKX3-1-202ENST00000523261 IFRD2Q12894 506 aaPredicted RBP14.71□□□□□ -0.05
NKX3-1-202ENST00000523261 NFATC3Q12968 1075 aa14.71□□□□□ -0.05
NKX3-1-202ENST00000523261 ILKQ13418 452 aa14.71□□□□□ -0.05
NKX3-1-202ENST00000523261 SHBQ15464 509 aa14.71□□□□□ -0.05
NKX3-1-202ENST00000523261 HECTD3Q5T447 861 aa14.71□□□□□ -0.05
NKX3-1-202ENST00000523261 KIAA1614Q5VZ46 1190 aa14.71□□□□□ -0.05
NKX3-1-202ENST00000523261 ZNF574Q6ZN55 896 aaPredicted RBP14.71□□□□□ -0.05
NKX3-1-202ENST00000523261 TPGS1Q6ZTW0 290 aa14.71□□□□□ -0.05
NKX3-1-202ENST00000523261 HTR3DQ70Z44 454 aa14.71□□□□□ -0.05
NKX3-1-202ENST00000523261 LIMS2Q7Z4I7 341 aa14.71□□□□□ -0.05
NKX3-1-202ENST00000523261 EID2Q8N6I1 236 aa14.71□□□□□ -0.05
NKX3-1-202ENST00000523261 NECAB1Q8N987 351 aa14.71□□□□□ -0.05
NKX3-1-202ENST00000523261 PDZD8Q8NEN9 1154 aa14.71□□□□□ -0.05
NKX3-1-202ENST00000523261 MYCBPAPQ8TBZ2 947 aa14.71□□□□□ -0.05
NKX3-1-202ENST00000523261 KCNE4Q8WWG9 221 aa14.71□□□□□ -0.05
NKX3-1-202ENST00000523261 FAM84AQ96KN4 292 aa14.71□□□□□ -0.05
NKX3-1-202ENST00000523261 ELF4Q99607 663 aaPredicted RBP14.71□□□□□ -0.05
NKX3-1-202ENST00000523261 FAM117AQ9C073 453 aa14.71□□□□□ -0.05
NKX3-1-202ENST00000523261 CCSER2Q9H7U1 834 aa14.71□□□□□ -0.05
NKX3-1-202ENST00000523261 FBXO10Q9UK96 956 aa14.71□□□□□ -0.05
NKX3-1-202ENST00000523261 SSUH2Q9Y2M2 353 aa14.71□□□□□ -0.05
NKX3-1-202ENST00000523261 ARID1BQ8NFD5 2236 aaPredicted RBP14.71□□□□□ -0.05
NKX3-1-202ENST00000523261 USP9YO00507 2555 aaPredicted RBP14.7□□□□□ -0.06
NKX3-1-202ENST00000523261 NPC1O15118 1278 aa14.7□□□□□ -0.06
NKX3-1-202ENST00000523261 KLK10O43240 276 aa14.7□□□□□ -0.06
NKX3-1-202ENST00000523261 SYNCRIPO60506 623 aaKnown RBP14.7□□□□□ -0.06
NKX3-1-202ENST00000523261 TSPAN3O60637 253 aa14.7□□□□□ -0.06
NKX3-1-202ENST00000523261 JAK2O60674 1132 aa14.7□□□□□ -0.06
NKX3-1-202ENST00000523261 ITGAVP06756 1048 aa14.7□□□□□ -0.06
NKX3-1-202ENST00000523261 YWHAQP27348 245 aa14.7□□□□□ -0.06
NKX3-1-202ENST00000523261 INSM1Q01101 510 aaPredicted RBP14.7□□□□□ -0.06
NKX3-1-202ENST00000523261 GUCY1B3Q02153 619 aa14.7□□□□□ -0.06
NKX3-1-202ENST00000523261 ZRSR1Q15695 479 aaKnown RBP14.7□□□□□ -0.06
NKX3-1-202ENST00000523261 IL17AQ16552 155 aa14.7□□□□□ -0.06
NKX3-1-202ENST00000523261 HYIQ5T013 277 aa14.7□□□□□ -0.06
NKX3-1-202ENST00000523261 SNX30Q5VWJ9 437 aa14.7□□□□□ -0.06
NKX3-1-202ENST00000523261 DPH6Q7L8W6 267 aa14.7□□□□□ -0.06
NKX3-1-202ENST00000523261 ADAT2Q7Z6V5 191 aaKnown RBP14.7□□□□□ -0.06
NKX3-1-202ENST00000523261 OVCA2Q8WZ82 227 aa14.7□□□□□ -0.06
NKX3-1-202ENST00000523261 FBXO32Q969P5 355 aa14.7□□□□□ -0.06
NKX3-1-202ENST00000523261 CHORDC1Q9UHD1 332 aaPredicted RBP14.7□□□□□ -0.06
NKX3-1-202ENST00000523261 SIX4Q9UIU6 781 aa14.7□□□□□ -0.06
NKX3-1-202ENST00000523261 ODF2LQ9ULJ1 636 aa14.7□□□□□ -0.06
NKX3-1-202ENST00000523261 PTPRJQ12913 1337 aa14.69□□□□□ -0.06
NKX3-1-202ENST00000523261 NBPF19A0A087WUL8 3843 aa14.69□□□□□ -0.06
NKX3-1-202ENST00000523261 VILLO15195 856 aa14.69□□□□□ -0.06
NKX3-1-202ENST00000523261 PDGFRBP09619 1106 aa14.69□□□□□ -0.06
NKX3-1-202ENST00000523261 PLA2G4BP0C869 781 aa14.69□□□□□ -0.06
NKX3-1-202ENST00000523261 ABCB4P21439 1286 aa14.69□□□□□ -0.06
NKX3-1-202ENST00000523261 TUBP50607 506 aa14.69□□□□□ -0.06
NKX3-1-202ENST00000523261 ZNF131P52739 623 aa14.69□□□□□ -0.06
NKX3-1-202ENST00000523261 GTF2BQ00403 316 aa14.69□□□□□ -0.06
NKX3-1-202ENST00000523261 MDH1BQ5I0G3 518 aa14.69□□□□□ -0.06
NKX3-1-202ENST00000523261 SLFN12LQ6IEE8 588 aa14.69□□□□□ -0.06
NKX3-1-202ENST00000523261 MYCT1Q8N699 235 aa14.69□□□□□ -0.06
NKX3-1-202ENST00000523261 CSGALNACT2Q8N6G5 542 aa14.69□□□□□ -0.06
NKX3-1-202ENST00000523261 KRI1Q8N9T8 703 aaKnown RBP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms