RNA–Protein interactions for RNA: ENST00000517378.1

CDH12-203, Transcript of cadherin 12, humanhuman

TSL 1 (best)

Gene CDH12, Length 2,843 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-203ENST00000517378 CFAP36Q96G28 342 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 PIWIL1Q96J94 861 aaKnown RBP6.91□□□□□ -1.3
CDH12-203ENST00000517378 C11orf84Q9BUA3 381 aaPredicted RBP6.91□□□□□ -1.3
CDH12-203ENST00000517378 RAB6CQ9H0N0 254 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 ASCC2Q9H1I8 757 aaPredicted RBP6.91□□□□□ -1.3
CDH12-203ENST00000517378 STN1Q9H668 368 aaKnown RBP6.91□□□□□ -1.3
CDH12-203ENST00000517378 MINDY3Q9H8M7 445 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 IFT122Q9HBG6 1241 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 SORCS3Q9UPU3 1222 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 C2CD2Q9Y426 696 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 CITO14578 2027 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 H0Y3Z8 333 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 INO80B-WBP1J3KQ70 363 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 HBP1O60381 514 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 NEBLO76041 1014 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 ECM2O94769 699 aaPredicted RBP6.91□□□□□ -1.3
CDH12-203ENST00000517378 C22orf31O95567 290 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 ZBED1O96006 694 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 CSH1P0DML2 217 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 CSH2P0DML3 217 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 RBL1P28749 1068 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 CDC25CP30307 473 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 ZBTB16Q05516 673 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 KLC1Q07866 573 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 ORC1Q13415 861 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 KRT81Q14533 505 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 C15orf59Q2T9L4 293 aaPredicted RBP6.91□□□□□ -1.3
CDH12-203ENST00000517378 MUM1Q2TAK8 710 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 DALRD3Q5D0E6 543 aaKnown RBP6.91□□□□□ -1.3
CDH12-203ENST00000517378 TREML2Q5T2D2 321 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 KYAT3Q6YP21 454 aaKnown RBP6.91□□□□□ -1.3
CDH12-203ENST00000517378 NET1Q7Z628 596 aaPredicted RBP6.91□□□□□ -1.3
CDH12-203ENST00000517378 ALYREFQ86V81 257 aaKnown RBP6.91□□□□□ -1.3
CDH12-203ENST00000517378 HOMEZQ8IX15 550 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 VPS52Q8N1B4 723 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 PPM1NQ8N819 430 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 E2F7Q96AV8 911 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 SIGLEC10Q96LC7 697 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 NLRP4Q96MN2 994 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 EBNA1BP2Q99848 306 aaKnown RBP6.91□□□□□ -1.3
CDH12-203ENST00000517378 CCDC106Q9BWC9 280 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 SLC4A5Q9BY07 1137 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 INO80BQ9C086 356 aaPredicted RBP6.91□□□□□ -1.3
CDH12-203ENST00000517378 SPATC1LQ9H0A9 340 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 PDZD7Q9H5P4 517 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.91□□□□□ -1.3
CDH12-203ENST00000517378 TSPAN16Q9UKR8 245 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 FZD1Q9UP38 647 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 HBS1LQ9Y450 684 aaKnown RBP6.91□□□□□ -1.3
CDH12-203ENST00000517378 PCDHA11Q9Y5I1 949 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 PDCD11Q14690 1871 aaKnown RBP6.91□□□□□ -1.3
CDH12-203ENST00000517378 C2orf71A6NGG8 1288 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 CAPN9O14815 690 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 IRF6O14896 467 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 TBX10O75333 385 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 ALDH1A2O94788 518 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 BPGMP07738 259 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 SERPINA6P08185 405 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 AOC1P19801 751 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 SCNN1AP37088 669 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 PHKA2P46019 1235 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 NR2C2P49116 596 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 NDST1P52848 882 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 BCAR1P56945 870 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 OSTNP61366 133 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 EN1Q05925 392 aaPredicted RBP6.91□□□□□ -1.3
CDH12-203ENST00000517378 WASHC5Q12768 1159 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 NAB1Q13506 487 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 SEMA5AQ13591 1074 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 DPYSL2Q16555 572 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 TRMT5Q32P41 509 aaKnown RBP6.91□□□□□ -1.3
CDH12-203ENST00000517378 SLC10A6Q3KNW5 377 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 DNAL1Q4LDG9 190 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 TRIM68Q6AZZ1 485 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 C1orf228Q6PIY5 440 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 MARK2Q7KZI7 788 aaKnown RBP6.91□□□□□ -1.3
CDH12-203ENST00000517378 TMEM110Q86TL2 294 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 ZDHHC17Q8IUH5 632 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 CCDC110Q8TBZ0 833 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 ACMSDQ8TDX5 336 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 KHSRPQ92945 711 aaKnown RBP eCLIP6.91□□□□□ -1.3
CDH12-203ENST00000517378 IFT43Q96FT9 208 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 HPDLQ96IR7 371 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 HEXIM2Q96MH2 286 aaKnown RBP6.91□□□□□ -1.3
CDH12-203ENST00000517378 QKIQ96PU8 341 aaKnown RBP eCLIP6.91□□□□□ -1.3
CDH12-203ENST00000517378 MPHOSPH6Q99547 160 aaKnown RBP6.91□□□□□ -1.3
CDH12-203ENST00000517378 FAM167BQ9BTA0 163 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 MECRQ9BV79 373 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 SNRNP25Q9BV90 132 aaKnown RBP6.91□□□□□ -1.3
CDH12-203ENST00000517378 GCOM2Q9BZD3 368 aaPredicted RBP6.91□□□□□ -1.3
CDH12-203ENST00000517378 SMARCAD1Q9H4L7 1026 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 XAB2Q9HCS7 855 aaKnown RBP6.91□□□□□ -1.3
CDH12-203ENST00000517378 DDX43Q9NXZ2 648 aaKnown RBP6.91□□□□□ -1.3
CDH12-203ENST00000517378 MOCS1Q9NZB8 636 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 TAGLN3Q9UI15 199 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 ASB3Q9Y575 518 aa6.91□□□□□ -1.3
CDH12-203ENST00000517378 ZNF236Q9UL36 1845 aa6.9□□□□□ -1.3
CDH12-203ENST00000517378 DNAJC25-GNG10A0A024R161 153 aa6.9□□□□□ -1.3
CDH12-203ENST00000517378 DPPA5A6NC42 116 aa6.9□□□□□ -1.3
CDH12-203ENST00000517378 NOP56O00567 594 aaKnown RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms