RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 GRID2IPA4D2P6 1211 aa5.08□□□□□ -1.6
HMGB3P13-201ENST00000511263 EIF3CLB5ME19 914 aaKnown RBP5.08□□□□□ -1.6
HMGB3P13-201ENST00000511263 CHUKO15111 745 aa5.08□□□□□ -1.6
HMGB3P13-201ENST00000511263 YY2O15391 372 aa5.08□□□□□ -1.6
HMGB3P13-201ENST00000511263 MPPED1O15442 326 aa5.08□□□□□ -1.6
HMGB3P13-201ENST00000511263 TBC1D4O60343 1298 aa5.08□□□□□ -1.6
HMGB3P13-201ENST00000511263 MGEA5O60502 916 aa5.08□□□□□ -1.6
HMGB3P13-201ENST00000511263 TUSC2O75896 110 aa5.08□□□□□ -1.6
HMGB3P13-201ENST00000511263 SUN1O94901 812 aa5.08□□□□□ -1.6
HMGB3P13-201ENST00000511263 RTN3O95197 1032 aaPredicted RBP5.08□□□□□ -1.6
HMGB3P13-201ENST00000511263 PIM1P11309 404 aaPredicted RBP5.08□□□□□ -1.6
HMGB3P13-201ENST00000511263 ZFXP17010 805 aaPredicted RBP5.08□□□□□ -1.6
HMGB3P13-201ENST00000511263 CHMLP26374 656 aa5.08□□□□□ -1.6
HMGB3P13-201ENST00000511263 CXCR5P32302 372 aa5.08□□□□□ -1.6
HMGB3P13-201ENST00000511263 PHKA1P46020 1223 aa5.08□□□□□ -1.6
HMGB3P13-201ENST00000511263 AGFG1P52594 562 aaKnown RBP5.08□□□□□ -1.6
HMGB3P13-201ENST00000511263 TBX4P57082 545 aa5.08□□□□□ -1.6
HMGB3P13-201ENST00000511263 RAB32Q13637 225 aa5.08□□□□□ -1.6
HMGB3P13-201ENST00000511263 LAMB3Q13751 1172 aa5.08□□□□□ -1.6
HMGB3P13-201ENST00000511263 SLMAPQ14BN4 828 aa5.08□□□□□ -1.6
HMGB3P13-201ENST00000511263 E2F5Q15329 346 aa5.08□□□□□ -1.6
HMGB3P13-201ENST00000511263 CD300EQ496F6 205 aaPredicted RBP5.08□□□□□ -1.6
HMGB3P13-201ENST00000511263 LRRC23Q53EV4 343 aaPredicted RBP5.08□□□□□ -1.6
HMGB3P13-201ENST00000511263 PLAC9Q5JTB6 97 aa5.08□□□□□ -1.6
HMGB3P13-201ENST00000511263 B3GNT9Q6UX72 402 aa5.08□□□□□ -1.6
HMGB3P13-201ENST00000511263 SLC30A10Q6XR72 485 aa5.08□□□□□ -1.6
HMGB3P13-201ENST00000511263 GRASPQ7Z6J2 395 aaPredicted RBP5.08□□□□□ -1.6
HMGB3P13-201ENST00000511263 PPP1R3BQ86XI6 285 aa5.08□□□□□ -1.6
HMGB3P13-201ENST00000511263 CCDC50Q8IVM0 306 aa5.08□□□□□ -1.6
HMGB3P13-201ENST00000511263 DNAJC10Q8IXB1 793 aa5.08□□□□□ -1.6
HMGB3P13-201ENST00000511263 CCDC170Q8IYT3 715 aa5.08□□□□□ -1.6
HMGB3P13-201ENST00000511263 SLC44A3Q8N4M1 653 aa5.08□□□□□ -1.6
HMGB3P13-201ENST00000511263 Q8NA96 180 aa5.08□□□□□ -1.6
HMGB3P13-201ENST00000511263 MIGA1Q8NAN2 632 aa5.08□□□□□ -1.6
HMGB3P13-201ENST00000511263 C1orf131Q8NDD1 294 aaKnown RBP5.08□□□□□ -1.6
HMGB3P13-201ENST00000511263 PSD4Q8NDX1 1056 aa5.08□□□□□ -1.6
HMGB3P13-201ENST00000511263 CTCFLQ8NI51 663 aaPredicted RBP5.08□□□□□ -1.6
HMGB3P13-201ENST00000511263 FAM81AQ8TBF8 368 aa5.08□□□□□ -1.6
HMGB3P13-201ENST00000511263 BICD2Q8TD16 824 aa5.08□□□□□ -1.6
HMGB3P13-201ENST00000511263 SSH3Q8TE77 659 aa5.08□□□□□ -1.6
HMGB3P13-201ENST00000511263 KBTBD7Q8WVZ9 684 aa5.08□□□□□ -1.6
HMGB3P13-201ENST00000511263 N4BP2L2Q92802 583 aaPredicted RBP5.08□□□□□ -1.6
HMGB3P13-201ENST00000511263 DHTKD1Q96HY7 919 aaPredicted RBP5.08□□□□□ -1.6
HMGB3P13-201ENST00000511263 FBXL20Q96IG2 436 aa5.08□□□□□ -1.6
HMGB3P13-201ENST00000511263 IWS1Q96ST2 819 aa5.08□□□□□ -1.6
HMGB3P13-201ENST00000511263 EIF3CQ99613 913 aaKnown RBP5.08□□□□□ -1.6
HMGB3P13-201ENST00000511263 NACA2Q9H009 215 aa5.08□□□□□ -1.6
HMGB3P13-201ENST00000511263 ARMT1Q9H993 441 aa5.08□□□□□ -1.6
HMGB3P13-201ENST00000511263 RGL1Q9NZL6 768 aa5.08□□□□□ -1.6
HMGB3P13-201ENST00000511263 PCDHA6Q9UN73 950 aa5.08□□□□□ -1.6
HMGB3P13-201ENST00000511263 TMX2Q9Y320 296 aa5.08□□□□□ -1.6
HMGB3P13-201ENST00000511263 INSL6Q9Y581 213 aa5.08□□□□□ -1.6
HMGB3P13-201ENST00000511263 TNFRSF18Q9Y5U5 241 aa5.08□□□□□ -1.6
HMGB3P13-201ENST00000511263 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.08□□□□□ -1.6
HMGB3P13-201ENST00000511263 PIK3C2GO75747 1445 aa5.07□□□□□ -1.6
HMGB3P13-201ENST00000511263 USP47Q96K76 1375 aa5.07□□□□□ -1.6
HMGB3P13-201ENST00000511263 MAP3K5Q99683 1374 aa5.07□□□□□ -1.6
HMGB3P13-201ENST00000511263 PROM1O43490 865 aa5.07□□□□□ -1.6
HMGB3P13-201ENST00000511263 AHCYL1O43865 530 aa5.07□□□□□ -1.6
HMGB3P13-201ENST00000511263 ERLIN2O94905 339 aa5.07□□□□□ -1.6
HMGB3P13-201ENST00000511263 AHSGP02765 367 aa5.07□□□□□ -1.6
HMGB3P13-201ENST00000511263 MYL1P05976 194 aa5.07□□□□□ -1.6
HMGB3P13-201ENST00000511263 GRPP07492 148 aa5.07□□□□□ -1.6
HMGB3P13-201ENST00000511263 ATF3P18847 181 aa5.07□□□□□ -1.6
HMGB3P13-201ENST00000511263 CD6P30203 668 aa5.07□□□□□ -1.6
HMGB3P13-201ENST00000511263 LRPAP1P30533 357 aa5.07□□□□□ -1.6
HMGB3P13-201ENST00000511263 VIPR2P41587 438 aa5.07□□□□□ -1.6
HMGB3P13-201ENST00000511263 WNT3P56703 355 aa5.07□□□□□ -1.6
HMGB3P13-201ENST00000511263 LOXL3P58215 753 aa5.07□□□□□ -1.6
HMGB3P13-201ENST00000511263 EXOSC9Q06265 439 aaKnown RBP5.07□□□□□ -1.6
HMGB3P13-201ENST00000511263 TRIM29Q14134 588 aa5.07□□□□□ -1.6
HMGB3P13-201ENST00000511263 PTPRRQ15256 657 aa5.07□□□□□ -1.6
HMGB3P13-201ENST00000511263 SF3B3Q15393 1217 aaKnown RBP5.07□□□□□ -1.6
HMGB3P13-201ENST00000511263 FAAH2Q6GMR7 532 aa5.07□□□□□ -1.6
HMGB3P13-201ENST00000511263 VWA1Q6PCB0 445 aa5.07□□□□□ -1.6
HMGB3P13-201ENST00000511263 MAEAQ7L5Y9 396 aa5.07□□□□□ -1.6
HMGB3P13-201ENST00000511263 CCAR1Q8IX12 1150 aaKnown RBP5.07□□□□□ -1.6
HMGB3P13-201ENST00000511263 PEX5LQ8IYB4 626 aa5.07□□□□□ -1.6
HMGB3P13-201ENST00000511263 CCDC146Q8IYE0 955 aa5.07□□□□□ -1.6
HMGB3P13-201ENST00000511263 ATP11CQ8NB49 1132 aa5.07□□□□□ -1.6
HMGB3P13-201ENST00000511263 PCSK9Q8NBP7 692 aaKnown RBP5.07□□□□□ -1.6
HMGB3P13-201ENST00000511263 ZBTB34Q8NCN2 500 aa5.07□□□□□ -1.6
HMGB3P13-201ENST00000511263 CCDC150Q8NCX0 1101 aa5.07□□□□□ -1.6
HMGB3P13-201ENST00000511263 BEND2Q8NDZ0 799 aa5.07□□□□□ -1.6
HMGB3P13-201ENST00000511263 FAM46DQ8NEK8 389 aa5.07□□□□□ -1.6
HMGB3P13-201ENST00000511263 TOR1AIP2Q8NFQ8 470 aa5.07□□□□□ -1.6
HMGB3P13-201ENST00000511263 ACTRT2Q8TDY3 377 aa5.07□□□□□ -1.6
HMGB3P13-201ENST00000511263 TTC17Q96AE7 1141 aa5.07□□□□□ -1.6
HMGB3P13-201ENST00000511263 RUNDC1Q96C34 613 aa5.07□□□□□ -1.6
HMGB3P13-201ENST00000511263 ERO1AQ96HE7 468 aa5.07□□□□□ -1.6
HMGB3P13-201ENST00000511263 RBM17Q96I25 401 aaKnown RBP5.07□□□□□ -1.6
HMGB3P13-201ENST00000511263 NAP1L3Q99457 506 aaPredicted RBP5.07□□□□□ -1.6
HMGB3P13-201ENST00000511263 DUSP26Q9BV47 211 aa5.07□□□□□ -1.6
HMGB3P13-201ENST00000511263 CDK19Q9BWU1 502 aa5.07□□□□□ -1.6
HMGB3P13-201ENST00000511263 TPSD1Q9BZJ3 242 aa5.07□□□□□ -1.6
HMGB3P13-201ENST00000511263 LRRCC1Q9C099 1032 aa5.07□□□□□ -1.6
HMGB3P13-201ENST00000511263 ZNHIT6Q9NWK9 470 aaKnown RBP5.07□□□□□ -1.6
HMGB3P13-201ENST00000511263 C6orf203Q9P0P8 240 aaPredicted RBP5.07□□□□□ -1.6
HMGB3P13-201ENST00000511263 ZNHIT2Q9UHR6 403 aa5.07□□□□□ -1.6
HMGB3P13-201ENST00000511263 EPN1Q9Y6I3 576 aaPredicted RBP5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms