RNA–Protein interactions for RNA: ENST00000504211.5

UBE2D3-217, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-217ENST00000504211 LMAN2Q12907 356 aa6.89□□□□□ -1.31
UBE2D3-217ENST00000504211 SMN1Q16637 294 aaKnown RBP6.89□□□□□ -1.31
UBE2D3-217ENST00000504211 TLDC1Q6P9B6 456 aa6.89□□□□□ -1.31
UBE2D3-217ENST00000504211 NAPRTQ6XQN6 538 aa6.89□□□□□ -1.31
UBE2D3-217ENST00000504211 TRIM72Q6ZMU5 477 aa6.89□□□□□ -1.31
UBE2D3-217ENST00000504211 PNPLA1Q8N8W4 532 aa6.89□□□□□ -1.31
UBE2D3-217ENST00000504211 VPS50Q96JG6 964 aa6.89□□□□□ -1.31
UBE2D3-217ENST00000504211 SNX18Q96RF0 628 aa6.89□□□□□ -1.31
UBE2D3-217ENST00000504211 MACROD1Q9BQ69 325 aa6.89□□□□□ -1.31
UBE2D3-217ENST00000504211 RXFP3Q9NSD7 469 aa6.89□□□□□ -1.31
UBE2D3-217ENST00000504211 COX11Q9Y6N1 276 aa6.89□□□□□ -1.31
UBE2D3-217ENST00000504211 CFTRP13569 1480 aa6.89□□□□□ -1.31
UBE2D3-217ENST00000504211 LRRC3CA6NJW4 275 aa6.88□□□□□ -1.31
UBE2D3-217ENST00000504211 PCDH17O14917 1159 aa6.88□□□□□ -1.31
UBE2D3-217ENST00000504211 AASDHQ4L235 1098 aaPredicted RBP6.88□□□□□ -1.31
UBE2D3-217ENST00000504211 PGBD2Q6P3X8 592 aa6.88□□□□□ -1.31
UBE2D3-217ENST00000504211 BCDIN3DQ7Z5W3 292 aaKnown RBP6.88□□□□□ -1.31
UBE2D3-217ENST00000504211 TERB1Q8NA31 727 aa6.88□□□□□ -1.31
UBE2D3-217ENST00000504211 ZNF527Q8NB42 609 aa6.88□□□□□ -1.31
UBE2D3-217ENST00000504211 NGDNQ8NEJ9 315 aaKnown RBP6.88□□□□□ -1.31
UBE2D3-217ENST00000504211 NELL1Q92832 810 aa6.88□□□□□ -1.31
UBE2D3-217ENST00000504211 ZG16BQ96DA0 208 aa6.88□□□□□ -1.31
UBE2D3-217ENST00000504211 MMS19Q96T76 1030 aa6.88□□□□□ -1.31
UBE2D3-217ENST00000504211 CIPCQ9C0C6 399 aa6.88□□□□□ -1.31
UBE2D3-217ENST00000504211 HELLSQ9NRZ9 838 aa6.88□□□□□ -1.31
UBE2D3-217ENST00000504211 MGAT4CQ9UBM8 478 aa6.88□□□□□ -1.31
UBE2D3-217ENST00000504211 LPAR3Q9UBY5 353 aa6.88□□□□□ -1.31
UBE2D3-217ENST00000504211 LDHAP00338 332 aaKnown RBP6.87□□□□□ -1.31
UBE2D3-217ENST00000504211 DGKQP52824 942 aa6.87□□□□□ -1.31
UBE2D3-217ENST00000504211 HOXA4Q00056 320 aaPredicted RBP6.87□□□□□ -1.31
UBE2D3-217ENST00000504211 DEUP1Q05D60 604 aa6.87□□□□□ -1.31
UBE2D3-217ENST00000504211 KCNJ12Q14500 433 aa6.87□□□□□ -1.31
UBE2D3-217ENST00000504211 TRIM71Q2Q1W2 868 aaKnown RBP6.87□□□□□ -1.31
UBE2D3-217ENST00000504211 TMEM63BQ5T3F8 832 aa6.87□□□□□ -1.31
UBE2D3-217ENST00000504211 FAM90A2PQ658T7 463 aa6.87□□□□□ -1.31
UBE2D3-217ENST00000504211 FCRLBQ6BAA4 426 aa6.87□□□□□ -1.31
UBE2D3-217ENST00000504211 GRHL2Q6ISB3 625 aa6.87□□□□□ -1.31
UBE2D3-217ENST00000504211 RD3Q7Z3Z2 195 aa6.87□□□□□ -1.31
UBE2D3-217ENST00000504211 MYLK4Q86YV6 388 aaPredicted RBP6.87□□□□□ -1.31
UBE2D3-217ENST00000504211 RASGRP3Q8IV61 690 aa6.87□□□□□ -1.31
UBE2D3-217ENST00000504211 CLASRPQ8N2M8 674 aaKnown RBP6.87□□□□□ -1.31
UBE2D3-217ENST00000504211 FAM71BQ8TC56 605 aa6.87□□□□□ -1.31
UBE2D3-217ENST00000504211 POF1BQ8WVV4 589 aa6.87□□□□□ -1.31
UBE2D3-217ENST00000504211 GRAMD1AQ96CP6 724 aa6.87□□□□□ -1.31
UBE2D3-217ENST00000504211 DAZAP1Q96EP5 407 aaKnown RBP6.87□□□□□ -1.31
UBE2D3-217ENST00000504211 GAR1Q9NY12 217 aaKnown RBP6.87□□□□□ -1.31
UBE2D3-217ENST00000504211 C11orf21Q9P2W6 132 aa6.87□□□□□ -1.31
UBE2D3-217ENST00000504211 ASAP1Q9ULH1 1129 aa6.87□□□□□ -1.31
UBE2D3-217ENST00000504211 MAGED2Q9UNF1 606 aaPredicted RBP6.87□□□□□ -1.31
UBE2D3-217ENST00000504211 AOX1Q06278 1338 aa6.86□□□□□ -1.31
UBE2D3-217ENST00000504211 F5H423 210 aaPredicted RBP6.86□□□□□ -1.31
UBE2D3-217ENST00000504211 NPC1O15118 1278 aa6.86□□□□□ -1.31
UBE2D3-217ENST00000504211 ZSCAN9O15535 394 aaPredicted RBP6.86□□□□□ -1.31
UBE2D3-217ENST00000504211 SKAP2O75563 359 aaPredicted RBP6.86□□□□□ -1.31
UBE2D3-217ENST00000504211 NTSR2O95665 410 aa6.86□□□□□ -1.31
UBE2D3-217ENST00000504211 APEHP13798 732 aaKnown RBP6.86□□□□□ -1.31
UBE2D3-217ENST00000504211 NPPBP16860 134 aa6.86□□□□□ -1.31
UBE2D3-217ENST00000504211 PDIA3P30101 505 aaKnown RBP6.86□□□□□ -1.31
UBE2D3-217ENST00000504211 PBX1P40424 430 aa6.86□□□□□ -1.31
UBE2D3-217ENST00000504211 RENBPP51606 427 aa6.86□□□□□ -1.31
UBE2D3-217ENST00000504211 PROK1P58294 105 aa6.86□□□□□ -1.31
UBE2D3-217ENST00000504211 CHAF1AQ13111 956 aaPredicted RBP6.86□□□□□ -1.31
UBE2D3-217ENST00000504211 GRM1Q13255 1194 aa6.86□□□□□ -1.31
UBE2D3-217ENST00000504211 SPARCL1Q14515 664 aa6.86□□□□□ -1.31
UBE2D3-217ENST00000504211 SUMO4Q6EEV6 95 aa6.86□□□□□ -1.31
UBE2D3-217ENST00000504211 ENAHQ8N8S7 591 aaPredicted RBP6.86□□□□□ -1.31
UBE2D3-217ENST00000504211 VPS37AQ8NEZ2 397 aa6.86□□□□□ -1.31
UBE2D3-217ENST00000504211 EDC3Q96F86 508 aaKnown RBP6.86□□□□□ -1.31
UBE2D3-217ENST00000504211 ASIC5Q9NY37 505 aa6.86□□□□□ -1.31
UBE2D3-217ENST00000504211 SH3BP4Q9P0V3 963 aa6.86□□□□□ -1.31
UBE2D3-217ENST00000504211 SOGA1O94964 1423 aa6.85□□□□□ -1.31
UBE2D3-217ENST00000504211 SPATA31A6Q5VVP1 1343 aa6.85□□□□□ -1.31
UBE2D3-217ENST00000504211 GXYLT2A0PJZ3 443 aa6.85□□□□□ -1.31
UBE2D3-217ENST00000504211 SYT5O00445 386 aa6.85□□□□□ -1.31
UBE2D3-217ENST00000504211 PIP5K1BO14986 540 aa6.85□□□□□ -1.31
UBE2D3-217ENST00000504211 SUV39H1O43463 412 aa6.85□□□□□ -1.31
UBE2D3-217ENST00000504211 ITGA5P08648 1049 aa6.85□□□□□ -1.31
UBE2D3-217ENST00000504211 TXNL4AP83876 142 aaKnown RBP6.85□□□□□ -1.31
UBE2D3-217ENST00000504211 ICA1Q05084 483 aa6.85□□□□□ -1.31
UBE2D3-217ENST00000504211 GALNT1Q10472 559 aaPredicted RBP6.85□□□□□ -1.31
UBE2D3-217ENST00000504211 DNASE1L3Q13609 305 aa6.85□□□□□ -1.31
UBE2D3-217ENST00000504211 PTK2BQ14289 1009 aa6.85□□□□□ -1.31
UBE2D3-217ENST00000504211 PUM3Q15397 648 aaKnown RBP6.85□□□□□ -1.31
UBE2D3-217ENST00000504211 ZACNQ401N2 412 aa6.85□□□□□ -1.31
UBE2D3-217ENST00000504211 C10orf62Q5T681 223 aaPredicted RBP6.85□□□□□ -1.31
UBE2D3-217ENST00000504211 OVCA2Q8WZ82 227 aa6.85□□□□□ -1.31
UBE2D3-217ENST00000504211 KAZALD1Q96I82 304 aa6.85□□□□□ -1.31
UBE2D3-217ENST00000504211 OBP2BQ9NPH6 170 aa6.85□□□□□ -1.31
UBE2D3-217ENST00000504211 COL11A2P13942 1736 aaPredicted RBP6.84□□□□□ -1.31
UBE2D3-217ENST00000504211 AQP12BA6NM10 295 aa6.84□□□□□ -1.31
UBE2D3-217ENST00000504211 LGALS16A8MUM7 142 aa6.84□□□□□ -1.31
UBE2D3-217ENST00000504211 SRGAP2BP0DMP2 458 aa6.84□□□□□ -1.31
UBE2D3-217ENST00000504211 CFHR3Q02985 330 aa6.84□□□□□ -1.31
UBE2D3-217ENST00000504211 PROSER3Q2NL68 480 aa6.84□□□□□ -1.31
UBE2D3-217ENST00000504211 TMEM196Q5HYL7 178 aa6.84□□□□□ -1.31
UBE2D3-217ENST00000504211 C12orf76Q8N812 135 aaPredicted RBP6.84□□□□□ -1.31
UBE2D3-217ENST00000504211 FSCN3Q9NQT6 498 aa6.84□□□□□ -1.31
UBE2D3-217ENST00000504211 TFCP2L1Q9NZI6 479 aa6.84□□□□□ -1.31
UBE2D3-217ENST00000504211 RUSC2Q8N2Y8 1516 aa6.84□□□□□ -1.31
UBE2D3-217ENST00000504211 GOLGA3Q08378 1498 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 169.6 ms