RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 EIF2AK1Q9BQI3 630 aaKnown RBP6.2□□□□□ -1.42
SSR3-208ENST00000496050 TWSG1Q9GZX9 223 aa6.2□□□□□ -1.42
SSR3-208ENST00000496050 SLC2A4RGQ9NR83 387 aa6.2□□□□□ -1.42
SSR3-208ENST00000496050 LIN7CQ9NUP9 197 aaKnown RBP6.2□□□□□ -1.42
SSR3-208ENST00000496050 MGAT4CQ9UBM8 478 aa6.2□□□□□ -1.42
SSR3-208ENST00000496050 DKK3Q9UBP4 350 aa6.2□□□□□ -1.42
SSR3-208ENST00000496050 FEM1BQ9UK73 627 aa6.2□□□□□ -1.42
SSR3-208ENST00000496050 SLC13A4Q9UKG4 626 aa6.2□□□□□ -1.42
SSR3-208ENST00000496050 BAG5Q9UL15 447 aa6.2□□□□□ -1.42
SSR3-208ENST00000496050 PNMA2Q9UL42 364 aa6.2□□□□□ -1.42
SSR3-208ENST00000496050 WDR27A2RRH5 827 aa6.19□□□□□ -1.42
SSR3-208ENST00000496050 KIF28PB7ZC32 967 aa6.19□□□□□ -1.42
SSR3-208ENST00000496050 CTIFO43310 598 aaKnown RBP6.19□□□□□ -1.42
SSR3-208ENST00000496050 RPP40O75818 363 aaKnown RBP6.19□□□□□ -1.42
SSR3-208ENST00000496050 KRT38O76015 456 aa6.19□□□□□ -1.42
SSR3-208ENST00000496050 TK1P04183 234 aa6.19□□□□□ -1.42
SSR3-208ENST00000496050 NR2F6P10588 404 aa6.19□□□□□ -1.42
SSR3-208ENST00000496050 ZNF37AP17032 561 aaPredicted RBP6.19□□□□□ -1.42
SSR3-208ENST00000496050 XBP1P17861 261 aa6.19□□□□□ -1.42
SSR3-208ENST00000496050 DRD1P21728 446 aa6.19□□□□□ -1.42
SSR3-208ENST00000496050 MCM2P49736 904 aa6.19□□□□□ -1.42
SSR3-208ENST00000496050 PRKAA2P54646 552 aa6.19□□□□□ -1.42
SSR3-208ENST00000496050 BFSP2Q13515 415 aa6.19□□□□□ -1.42
SSR3-208ENST00000496050 SLC4A8Q2Y0W8 1093 aa6.19□□□□□ -1.42
SSR3-208ENST00000496050 TBRG1Q3YBR2 411 aa6.19□□□□□ -1.42
SSR3-208ENST00000496050 SPATS1Q496A3 300 aa6.19□□□□□ -1.42
SSR3-208ENST00000496050 INTS11Q5TA45 600 aaKnown RBP6.19□□□□□ -1.42
SSR3-208ENST00000496050 TTC22Q5TAA0 569 aa6.19□□□□□ -1.42
SSR3-208ENST00000496050 DENND2CQ68D51 928 aa6.19□□□□□ -1.42
SSR3-208ENST00000496050 KIAA0895LQ68EN5 471 aa6.19□□□□□ -1.42
SSR3-208ENST00000496050 MTHFD1LQ6UB35 978 aa6.19□□□□□ -1.42
SSR3-208ENST00000496050 KRT27Q7Z3Y8 459 aa6.19□□□□□ -1.42
SSR3-208ENST00000496050 MRGPREQ86SM8 312 aa6.19□□□□□ -1.42
SSR3-208ENST00000496050 P3H2Q8IVL5 708 aa6.19□□□□□ -1.42
SSR3-208ENST00000496050 LRRC71Q8N4P6 559 aa6.19□□□□□ -1.42
SSR3-208ENST00000496050 NAXEQ8NCW5 288 aa6.19□□□□□ -1.42
SSR3-208ENST00000496050 RP9Q8TA86 221 aaKnown RBP6.19□□□□□ -1.42
SSR3-208ENST00000496050 CTHRC1Q96CG8 243 aa6.19□□□□□ -1.42
SSR3-208ENST00000496050 MPP4Q96JB8 637 aa6.19□□□□□ -1.42
SSR3-208ENST00000496050 MAELQ96JY0 434 aaKnown RBP6.19□□□□□ -1.42
SSR3-208ENST00000496050 PBKQ96KB5 322 aa6.19□□□□□ -1.42
SSR3-208ENST00000496050 PPM1MQ96MI6 270 aa6.19□□□□□ -1.42
SSR3-208ENST00000496050 COG8Q96MW5 612 aa6.19□□□□□ -1.42
SSR3-208ENST00000496050 CCDC134Q9H6E4 229 aa6.19□□□□□ -1.42
SSR3-208ENST00000496050 CHODLQ9H9P2 273 aa6.19□□□□□ -1.42
SSR3-208ENST00000496050 NOD2Q9HC29 1040 aa6.19□□□□□ -1.42
SSR3-208ENST00000496050 ARHGEF3Q9NR81 526 aa6.19□□□□□ -1.42
SSR3-208ENST00000496050 FBXO28Q9NVF7 368 aa6.19□□□□□ -1.42
SSR3-208ENST00000496050 VWC2LB2RUY7 222 aa6.18□□□□□ -1.42
SSR3-208ENST00000496050 PRRT4C9JH25 899 aa6.18□□□□□ -1.42
SSR3-208ENST00000496050 CES2O00748 559 aa6.18□□□□□ -1.42
SSR3-208ENST00000496050 HKR1P10072 659 aa6.18□□□□□ -1.42
SSR3-208ENST00000496050 RXRAP19793 462 aa6.18□□□□□ -1.42
SSR3-208ENST00000496050 CNTFP26441 200 aa6.18□□□□□ -1.42
SSR3-208ENST00000496050 SERPINA4P29622 427 aa6.18□□□□□ -1.42
SSR3-208ENST00000496050 CLCN2P51788 898 aa6.18□□□□□ -1.42
SSR3-208ENST00000496050 TPTEP56180 551 aa6.18□□□□□ -1.42
SSR3-208ENST00000496050 TAP1Q03518 808 aa6.18□□□□□ -1.42
SSR3-208ENST00000496050 TLE2Q04725 743 aa6.18□□□□□ -1.42
SSR3-208ENST00000496050 SF3A3Q12874 501 aaKnown RBP eCLIP6.18□□□□□ -1.42
SSR3-208ENST00000496050 AASDHQ4L235 1098 aaPredicted RBP6.18□□□□□ -1.42
SSR3-208ENST00000496050 FAM90A2PQ658T7 463 aa6.18□□□□□ -1.42
SSR3-208ENST00000496050 ZNF551Q7Z340 670 aaPredicted RBP6.18□□□□□ -1.42
SSR3-208ENST00000496050 WDR53Q7Z5U6 358 aaPredicted RBP6.18□□□□□ -1.42
SSR3-208ENST00000496050 LRRTM4Q86VH4 590 aa6.18□□□□□ -1.42
SSR3-208ENST00000496050 SLC22A17Q8WUG5 538 aa6.18□□□□□ -1.42
SSR3-208ENST00000496050 RFKQ969G6 155 aa6.18□□□□□ -1.42
SSR3-208ENST00000496050 ZNF503Q96F45 646 aa6.18□□□□□ -1.42
SSR3-208ENST00000496050 REXO5Q96IC2 774 aaKnown RBP6.18□□□□□ -1.42
SSR3-208ENST00000496050 KRTAP3-1Q9BYR8 98 aa6.18□□□□□ -1.42
SSR3-208ENST00000496050 TMLHEQ9NVH6 421 aa6.18□□□□□ -1.42
SSR3-208ENST00000496050 AMFRQ9UKV5 643 aa6.18□□□□□ -1.42
SSR3-208ENST00000496050 GABRQQ9UN88 632 aa6.18□□□□□ -1.42
SSR3-208ENST00000496050 CRYL1Q9Y2S2 319 aa6.18□□□□□ -1.42
SSR3-208ENST00000496050 PCDHB7Q9Y5E2 793 aa6.18□□□□□ -1.42
SSR3-208ENST00000496050 CCDC151A5D8V7 595 aa6.17□□□□□ -1.42
SSR3-208ENST00000496050 AP4M1O00189 453 aa6.17□□□□□ -1.42
SSR3-208ENST00000496050 EPB41L2O43491 1005 aaKnown RBP6.17□□□□□ -1.42
SSR3-208ENST00000496050 SPRY2O43597 315 aa6.17□□□□□ -1.42
SSR3-208ENST00000496050 TMPRSS11DO60235 418 aa6.17□□□□□ -1.42
SSR3-208ENST00000496050 TFRCP02786 760 aaKnown RBP6.17□□□□□ -1.42
SSR3-208ENST00000496050 POLBP06746 335 aa6.17□□□□□ -1.42
SSR3-208ENST00000496050 ADRA1DP25100 572 aa6.17□□□□□ -1.42
SSR3-208ENST00000496050 RBM5P52756 815 aaKnown RBP eCLIP6.17□□□□□ -1.42
SSR3-208ENST00000496050 DGCR2P98153 550 aa6.17□□□□□ -1.42
SSR3-208ENST00000496050 EFEMP1Q12805 493 aa6.17□□□□□ -1.42
SSR3-208ENST00000496050 CBFBQ13951 182 aa6.17□□□□□ -1.42
SSR3-208ENST00000496050 SMAD1Q15797 465 aaKnown RBP6.17□□□□□ -1.42
SSR3-208ENST00000496050 LSM12Q3MHD2 195 aaKnown RBP6.17□□□□□ -1.42
SSR3-208ENST00000496050 Q6ZNX1 250 aa6.17□□□□□ -1.42
SSR3-208ENST00000496050 PTCHD4Q6ZW05 846 aa6.17□□□□□ -1.42
SSR3-208ENST00000496050 USP51Q70EK9 711 aa6.17□□□□□ -1.42
SSR3-208ENST00000496050 ANKS1BQ7Z6G8 1248 aa6.17□□□□□ -1.42
SSR3-208ENST00000496050 FAM71DQ8N9W8 422 aa6.17□□□□□ -1.42
SSR3-208ENST00000496050 ASB12Q8WXK4 309 aa6.17□□□□□ -1.42
SSR3-208ENST00000496050 TFAP2BQ92481 460 aa6.17□□□□□ -1.42
SSR3-208ENST00000496050 FAR2Q96K12 515 aa6.17□□□□□ -1.42
SSR3-208ENST00000496050 PRR25Q96S07 402 aa6.17□□□□□ -1.42
SSR3-208ENST00000496050 CYP4F11Q9HBI6 524 aa6.17□□□□□ -1.42
SSR3-208ENST00000496050 G6PC2Q9NQR9 355 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms