RNA–Protein interactions for RNA: ENST00000493622.5

PHGDH-206, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 5

Gene PHGDH, Length 742 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-206ENST00000493622 SERPINB12Q96P63 405 aa9.36□□□□□ -0.91
PHGDH-206ENST00000493622 OLFM3Q96PB7 478 aa9.36□□□□□ -0.91
PHGDH-206ENST00000493622 RBM15Q96T37 977 aaKnown RBP eCLIP9.36□□□□□ -0.914e-7■■■□□ 17.3
PHGDH-206ENST00000493622 ACBD6Q9BR61 282 aa9.36□□□□□ -0.91
PHGDH-206ENST00000493622 ULBP1Q9BZM6 244 aa9.36□□□□□ -0.91
PHGDH-206ENST00000493622 WDR6Q9NNW5 1121 aaKnown RBP9.36□□□□□ -0.91
PHGDH-206ENST00000493622 TMLHEQ9NVH6 421 aa9.36□□□□□ -0.91
PHGDH-206ENST00000493622 RCOR3Q9P2K3 495 aaPredicted RBP9.36□□□□□ -0.91
PHGDH-206ENST00000493622 AP4E1Q9UPM8 1137 aa9.36□□□□□ -0.91
PHGDH-206ENST00000493622 CLUHO75153 1309 aa9.35□□□□□ -0.91
PHGDH-206ENST00000493622 TCRBV7S3A2A0A539 114 aa9.35□□□□□ -0.91
PHGDH-206ENST00000493622 CFAP69A5D8W1 941 aa9.35□□□□□ -0.91
PHGDH-206ENST00000493622 ERICH4A6NGS2 130 aa9.35□□□□□ -0.91
PHGDH-206ENST00000493622 YJEFN3A6XGL0 299 aa9.35□□□□□ -0.91
PHGDH-206ENST00000493622 E7ENQ6 273 aa9.35□□□□□ -0.91
PHGDH-206ENST00000493622 F8W810 466 aa9.35□□□□□ -0.91
PHGDH-206ENST00000493622 I3L4J1 428 aa9.35□□□□□ -0.91
PHGDH-206ENST00000493622 I6L893 689 aaPredicted RBP9.35□□□□□ -0.91
PHGDH-206ENST00000493622 SMAPO00193 183 aa9.35□□□□□ -0.91
PHGDH-206ENST00000493622 RASGRF2O14827 1237 aa9.35□□□□□ -0.91
PHGDH-206ENST00000493622 DDHD2O94830 711 aa9.35□□□□□ -0.91
PHGDH-206ENST00000493622 IFNB1P01574 187 aa9.35□□□□□ -0.91
PHGDH-206ENST00000493622 AMHP03971 560 aa9.35□□□□□ -0.91
PHGDH-206ENST00000493622 TYMPP19971 482 aa9.35□□□□□ -0.91
PHGDH-206ENST00000493622 PCSK1P29120 753 aa9.35□□□□□ -0.91
PHGDH-206ENST00000493622 LSP1P33241 339 aa9.35□□□□□ -0.91
PHGDH-206ENST00000493622 MAP2K2P36507 400 aa9.35□□□□□ -0.91
PHGDH-206ENST00000493622 CTCFP49711 727 aaPredicted RBP9.35□□□□□ -0.91
PHGDH-206ENST00000493622 SULT1E1P49888 294 aa9.35□□□□□ -0.91
PHGDH-206ENST00000493622 CDK7P50613 346 aa9.35□□□□□ -0.91
PHGDH-206ENST00000493622 APLP1P51693 650 aa9.35□□□□□ -0.91
PHGDH-206ENST00000493622 TKTL1P51854 596 aa9.35□□□□□ -0.91
PHGDH-206ENST00000493622 MAP3K7CLP57077 242 aa9.35□□□□□ -0.91
PHGDH-206ENST00000493622 YWHAZP63104 245 aaKnown RBP9.35□□□□□ -0.91
PHGDH-206ENST00000493622 ROR1Q01973 937 aa9.35□□□□□ -0.91
PHGDH-206ENST00000493622 GUCY1A3Q02108 690 aa9.35□□□□□ -0.91
PHGDH-206ENST00000493622 SCAPQ12770 1279 aa9.35□□□□□ -0.91
PHGDH-206ENST00000493622 SLC10A2Q12908 348 aaPredicted RBP9.35□□□□□ -0.91
PHGDH-206ENST00000493622 SEMA3BQ13214 749 aa9.35□□□□□ -0.91
PHGDH-206ENST00000493622 XRCC4Q13426 336 aa9.35□□□□□ -0.91
PHGDH-206ENST00000493622 MSS51Q4VC12 460 aa9.35□□□□□ -0.91
PHGDH-206ENST00000493622 NCBP2-AS2Q69YL0 99 aa9.35□□□□□ -0.91
PHGDH-206ENST00000493622 SCYL2Q6P3W7 929 aa9.35□□□□□ -0.91
PHGDH-206ENST00000493622 DCLRE1AQ6PJP8 1040 aa9.35□□□□□ -0.91
PHGDH-206ENST00000493622 PCGF5Q86SE9 256 aa9.35□□□□□ -0.91
PHGDH-206ENST00000493622 LRRTM3Q86VH5 581 aa9.35□□□□□ -0.91
PHGDH-206ENST00000493622 MAP7D3Q8IWC1 876 aa9.35□□□□□ -0.91
PHGDH-206ENST00000493622 PPIL6Q8IXY8 311 aa9.35□□□□□ -0.91
PHGDH-206ENST00000493622 COLGALT2Q8IYK4 626 aa9.35□□□□□ -0.91
PHGDH-206ENST00000493622 FAM71DQ8N9W8 422 aa9.35□□□□□ -0.91
PHGDH-206ENST00000493622 RAET1EQ8TD07 263 aa9.35□□□□□ -0.91
PHGDH-206ENST00000493622 NTAN1Q96AB6 310 aa9.35□□□□□ -0.91
PHGDH-206ENST00000493622 PGAP3Q96FM1 320 aaPredicted RBP9.35□□□□□ -0.91
PHGDH-206ENST00000493622 SMARCD1Q96GM5 515 aa9.35□□□□□ -0.91
PHGDH-206ENST00000493622 C9orf72Q96LT7 481 aa9.35□□□□□ -0.91
PHGDH-206ENST00000493622 GLT1D1Q96MS3 346 aa9.35□□□□□ -0.91
PHGDH-206ENST00000493622 QKIQ96PU8 341 aaKnown RBP eCLIP9.35□□□□□ -0.91
PHGDH-206ENST00000493622 CSPG4P5Q96PW8 444 aa9.35□□□□□ -0.91
PHGDH-206ENST00000493622 TMEM209Q96SK2 561 aa9.35□□□□□ -0.91
PHGDH-206ENST00000493622 KCNK16Q96T55 309 aa9.35□□□□□ -0.91
PHGDH-206ENST00000493622 MED10Q9BTT4 135 aa9.35□□□□□ -0.91
PHGDH-206ENST00000493622 RHOBTB2Q9BYZ6 727 aa9.35□□□□□ -0.91
PHGDH-206ENST00000493622 LRRC4Q9HBW1 653 aa9.35□□□□□ -0.91
PHGDH-206ENST00000493622 SAYSD1Q9NPB0 183 aa9.35□□□□□ -0.91
PHGDH-206ENST00000493622 ANLNQ9NQW6 1124 aa9.35□□□□□ -0.91
PHGDH-206ENST00000493622 CNGB3Q9NQW8 809 aa9.35□□□□□ -0.91
PHGDH-206ENST00000493622 CWC15Q9P013 229 aaKnown RBP9.35□□□□□ -0.91
PHGDH-206ENST00000493622 NYNRINQ9P2P1 1898 aaKnown RBP9.35□□□□□ -0.91
PHGDH-206ENST00000493622 PCDHB8Q9UN66 801 aa9.35□□□□□ -0.91
PHGDH-206ENST00000493622 MFHAS1Q9Y4C4 1052 aa9.35□□□□□ -0.91
PHGDH-206ENST00000493622 SF3B1O75533 1304 aaKnown RBP eCLIP9.34□□□□□ -0.918e-6■■■■■ 107
PHGDH-206ENST00000493622 HTTP42858 3142 aa9.34□□□□□ -0.91
PHGDH-206ENST00000493622 ARVCFO00192 962 aa9.34□□□□□ -0.91
PHGDH-206ENST00000493622 RGS16O15492 202 aaPredicted RBP9.34□□□□□ -0.91
PHGDH-206ENST00000493622 DGKIO75912 1065 aa9.34□□□□□ -0.91
PHGDH-206ENST00000493622 B3GAT3O94766 335 aa9.34□□□□□ -0.91
PHGDH-206ENST00000493622 EOMESO95936 686 aa9.34□□□□□ -0.91
PHGDH-206ENST00000493622 STIP1P31948 543 aaKnown RBP9.34□□□□□ -0.91
PHGDH-206ENST00000493622 HPDP32754 393 aaPredicted RBP9.34□□□□□ -0.91
PHGDH-206ENST00000493622 RDXP35241 583 aaKnown RBP9.34□□□□□ -0.91
PHGDH-206ENST00000493622 VEGFBP49765 207 aa9.34□□□□□ -0.91
PHGDH-206ENST00000493622 PRMT2P55345 433 aa9.34□□□□□ -0.91
PHGDH-206ENST00000493622 BCAR1P56945 870 aa9.34□□□□□ -0.91
PHGDH-206ENST00000493622 GPX6P59796 221 aa9.34□□□□□ -0.91
PHGDH-206ENST00000493622 GBE1Q04446 702 aa9.34□□□□□ -0.91
PHGDH-206ENST00000493622 EIF4EBP2Q13542 120 aaPredicted RBP9.34□□□□□ -0.91
PHGDH-206ENST00000493622 DPYSQ14117 519 aa9.34□□□□□ -0.91
PHGDH-206ENST00000493622 STAT4Q14765 748 aa9.34□□□□□ -0.91
PHGDH-206ENST00000493622 ZSCAN26Q16670 478 aa9.34□□□□□ -0.91
PHGDH-206ENST00000493622 LONRF1Q17RB8 773 aa9.34□□□□□ -0.91
PHGDH-206ENST00000493622 PAN2Q504Q3 1202 aaKnown RBP9.34□□□□□ -0.91
PHGDH-206ENST00000493622 FNBP1LQ5T0N5 605 aa9.34□□□□□ -0.91
PHGDH-206ENST00000493622 ARTNQ5T4W7 220 aa9.34□□□□□ -0.91
PHGDH-206ENST00000493622 TTC19Q6DKK2 380 aaPredicted RBP9.34□□□□□ -0.91
PHGDH-206ENST00000493622 PM20D1Q6GTS8 502 aa9.34□□□□□ -0.91
PHGDH-206ENST00000493622 C1orf228Q6PIY5 440 aa9.34□□□□□ -0.91
PHGDH-206ENST00000493622 SLC24A5Q71RS6 500 aa9.34□□□□□ -0.91
PHGDH-206ENST00000493622 CTU1Q7Z7A3 348 aaKnown RBP9.34□□□□□ -0.91
PHGDH-206ENST00000493622 EXOC3L1Q86VI1 746 aa9.34□□□□□ -0.91
PHGDH-206ENST00000493622 FAM131BQ86XD5 332 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms