RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 TFB1MQ8WVM0 346 aaKnown RBP11.69□□□□□ -0.54
SMPD4-218ENST00000482171 SENP8Q96LD8 212 aa11.69□□□□□ -0.54
SMPD4-218ENST00000482171 CTNNAL1Q9UBT7 734 aa11.69□□□□□ -0.54
SMPD4-218ENST00000482171 NAALADL1Q9UQQ1 740 aa11.69□□□□□ -0.54
SMPD4-218ENST00000482171 PCDHB7Q9Y5E2 793 aa11.69□□□□□ -0.54
SMPD4-218ENST00000482171 STRCQ7RTU9 1775 aa11.69□□□□□ -0.54
SMPD4-218ENST00000482171 CCDC88AQ3V6T2 1871 aa11.69□□□□□ -0.54
SMPD4-218ENST00000482171 GRIN2DO15399 1336 aa11.69□□□□□ -0.54
SMPD4-218ENST00000482171 CNTNAP2Q9UHC6 1331 aa11.69□□□□□ -0.54
SMPD4-218ENST00000482171 LOC100653049A0A140TA62 436 aa11.69□□□□□ -0.54
SMPD4-218ENST00000482171 KRT34O76011 436 aa11.69□□□□□ -0.54
SMPD4-218ENST00000482171 PECAM1P16284 738 aaPredicted RBP11.69□□□□□ -0.54
SMPD4-218ENST00000482171 PAMP19021 973 aa11.69□□□□□ -0.54
SMPD4-218ENST00000482171 CYP2F1P24903 491 aa11.69□□□□□ -0.54
SMPD4-218ENST00000482171 FLT3LGP49771 235 aa11.69□□□□□ -0.54
SMPD4-218ENST00000482171 OVOS1Q6IE37 1185 aa11.69□□□□□ -0.54
SMPD4-218ENST00000482171 CPNE8Q86YQ8 564 aa11.69□□□□□ -0.54
SMPD4-218ENST00000482171 SOCS4Q8WXH5 440 aa11.69□□□□□ -0.54
SMPD4-218ENST00000482171 HES6Q96HZ4 224 aa11.69□□□□□ -0.54
SMPD4-218ENST00000482171 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.69□□□□□ -0.54
SMPD4-218ENST00000482171 TRIM49D1C9J1S8 452 aa11.69□□□□□ -0.54
SMPD4-218ENST00000482171 TREHO43280 583 aa11.69□□□□□ -0.54
SMPD4-218ENST00000482171 CYP1A2P05177 515 aa11.69□□□□□ -0.54
SMPD4-218ENST00000482171 ELNP15502 786 aa11.69□□□□□ -0.54
SMPD4-218ENST00000482171 EEF1B2P24534 225 aaKnown RBP11.69□□□□□ -0.54
SMPD4-218ENST00000482171 ATXN3P54252 364 aaPredicted RBP11.69□□□□□ -0.54
SMPD4-218ENST00000482171 CRELD2Q6UXH1 353 aaPredicted RBP11.69□□□□□ -0.54
SMPD4-218ENST00000482171 FOXP3Q9BZS1 431 aa11.69□□□□□ -0.54
SMPD4-218ENST00000482171 ERVK-5Q9HDB9 667 aa11.69□□□□□ -0.54
SMPD4-218ENST00000482171 FAM8A1Q9UBU6 413 aa11.69□□□□□ -0.54
SMPD4-218ENST00000482171 MYH7P12883 1935 aa11.68□□□□□ -0.54
SMPD4-218ENST00000482171 PLCH1Q4KWH8 1693 aa11.68□□□□□ -0.54
SMPD4-218ENST00000482171 ARHGAP10A1A4S6 786 aa11.68□□□□□ -0.54
SMPD4-218ENST00000482171 TTC4O95801 387 aa11.68□□□□□ -0.54
SMPD4-218ENST00000482171 KRT16P08779 473 aa11.68□□□□□ -0.54
SMPD4-218ENST00000482171 PAEPP09466 180 aa11.68□□□□□ -0.54
SMPD4-218ENST00000482171 SSTR1P30872 391 aa11.68□□□□□ -0.54
SMPD4-218ENST00000482171 NSUN2Q08J23 767 aaKnown RBP eCLIP11.68□□□□□ -0.54
SMPD4-218ENST00000482171 FAM110CQ1W6H9 321 aa11.68□□□□□ -0.54
SMPD4-218ENST00000482171 FASTKD1Q53R41 847 aaKnown RBP11.68□□□□□ -0.54
SMPD4-218ENST00000482171 IL31Q6EBC2 164 aa11.68□□□□□ -0.54
SMPD4-218ENST00000482171 ARID3BQ8IVW6 561 aaPredicted RBP11.68□□□□□ -0.54
SMPD4-218ENST00000482171 JOSD2Q8TAC2 188 aa11.68□□□□□ -0.54
SMPD4-218ENST00000482171 MRPL46Q9H2W6 279 aaKnown RBP11.68□□□□□ -0.54
SMPD4-218ENST00000482171 WHRNQ9P202 907 aa11.68□□□□□ -0.54
SMPD4-218ENST00000482171 BTAF1O14981 1849 aa11.68□□□□□ -0.54
SMPD4-218ENST00000482171 TCRBV7S2A1N4TA0A589 114 aa11.68□□□□□ -0.54
SMPD4-218ENST00000482171 C4BPAP04003 597 aaKnown RBP11.68□□□□□ -0.54
SMPD4-218ENST00000482171 HMGCRP04035 888 aa11.68□□□□□ -0.54
SMPD4-218ENST00000482171 CALB2P22676 271 aa11.68□□□□□ -0.54
SMPD4-218ENST00000482171 BDNFP23560 247 aa11.68□□□□□ -0.54
SMPD4-218ENST00000482171 ICAM3P32942 547 aa11.68□□□□□ -0.54
SMPD4-218ENST00000482171 MMRN1Q13201 1228 aa11.68□□□□□ -0.54
SMPD4-218ENST00000482171 XRCC4Q13426 336 aa11.68□□□□□ -0.54
SMPD4-218ENST00000482171 CNGA3Q16281 694 aa11.68□□□□□ -0.54
SMPD4-218ENST00000482171 NPNTQ6UXI9 565 aa11.68□□□□□ -0.54
SMPD4-218ENST00000482171 NDUFAF2Q8N183 169 aa11.68□□□□□ -0.54
SMPD4-218ENST00000482171 DTNBP1Q96EV8 351 aa11.68□□□□□ -0.54
SMPD4-218ENST00000482171 ZFP42Q96MM3 310 aa11.68□□□□□ -0.54
SMPD4-218ENST00000482171 NIFKQ9BYG3 293 aaKnown RBP11.68□□□□□ -0.54
SMPD4-218ENST00000482171 MANSC1Q9H8J5 431 aa11.68□□□□□ -0.54
SMPD4-218ENST00000482171 GTSE1Q9NYZ3 720 aa11.68□□□□□ -0.54
SMPD4-218ENST00000482171 PDP2Q9P2J9 529 aa11.68□□□□□ -0.54
SMPD4-218ENST00000482171 ANGPTL3Q9Y5C1 460 aa11.68□□□□□ -0.54
SMPD4-218ENST00000482171 JCHAINP01591 159 aa11.68□□□□□ -0.54
SMPD4-218ENST00000482171 CASP2P42575 452 aa11.68□□□□□ -0.54
SMPD4-218ENST00000482171 CCNHP51946 323 aaPredicted RBP11.68□□□□□ -0.54
SMPD4-218ENST00000482171 YWHAZP63104 245 aaKnown RBP11.68□□□□□ -0.54
SMPD4-218ENST00000482171 EFEMP1Q12805 493 aa11.68□□□□□ -0.54
SMPD4-218ENST00000482171 CTXN3Q4LDR2 81 aa11.68□□□□□ -0.54
SMPD4-218ENST00000482171 TMEM192Q8IY95 271 aa11.68□□□□□ -0.54
SMPD4-218ENST00000482171 B4GALNT2Q8NHY0 566 aa11.68□□□□□ -0.54
SMPD4-218ENST00000482171 PPTC7Q8NI37 304 aa11.68□□□□□ -0.54
SMPD4-218ENST00000482171 STK32AQ8WU08 396 aa11.68□□□□□ -0.54
SMPD4-218ENST00000482171 B3GNT5Q9BYG0 378 aa11.68□□□□□ -0.54
SMPD4-218ENST00000482171 TUBGCP4Q9UGJ1 667 aa11.68□□□□□ -0.54
SMPD4-218ENST00000482171 NCANO14594 1321 aa11.67□□□□□ -0.54
SMPD4-218ENST00000482171 CLDN5O00501 218 aa11.67□□□□□ -0.54
SMPD4-218ENST00000482171 MMP3P08254 477 aa11.67□□□□□ -0.54
SMPD4-218ENST00000482171 ALDH7A1P49419 539 aaKnown RBP11.67□□□□□ -0.54
SMPD4-218ENST00000482171 SPRYD7Q5W111 196 aa11.67□□□□□ -0.54
SMPD4-218ENST00000482171 TRIM67Q6ZTA4 783 aa11.67□□□□□ -0.54
SMPD4-218ENST00000482171 SHCBP1Q8NEM2 672 aa11.67□□□□□ -0.54
SMPD4-218ENST00000482171 BRI3BPQ8WY22 251 aa11.67□□□□□ -0.54
SMPD4-218ENST00000482171 ALKBH8Q96BT7 664 aaKnown RBP11.67□□□□□ -0.54
SMPD4-218ENST00000482171 RPRD1AQ96P16 312 aaPredicted RBP11.67□□□□□ -0.54
SMPD4-218ENST00000482171 ST6GALNAC4Q9H4F1 302 aa11.67□□□□□ -0.54
SMPD4-218ENST00000482171 APOBEC3GQ9HC16 384 aaKnown RBP11.67□□□□□ -0.54
SMPD4-218ENST00000482171 NR2E1Q9Y466 385 aa11.67□□□□□ -0.54
SMPD4-218ENST00000482171 RPS6KL1Q9Y6S9 549 aa11.67□□□□□ -0.54
SMPD4-218ENST00000482171 MYH1P12882 1939 aa11.67□□□□□ -0.54
SMPD4-218ENST00000482171 SRRM3A6NNA2 597 aaPredicted RBP11.67□□□□□ -0.54
SMPD4-218ENST00000482171 USP17L7P0C7H9 530 aa11.67□□□□□ -0.54
SMPD4-218ENST00000482171 SMPD1P17405 629 aa11.67□□□□□ -0.54
SMPD4-218ENST00000482171 ATP4AP20648 1035 aa11.67□□□□□ -0.54
SMPD4-218ENST00000482171 DNAJB2P25686 324 aa11.67□□□□□ -0.54
SMPD4-218ENST00000482171 JAM2P57087 298 aa11.67□□□□□ -0.54
SMPD4-218ENST00000482171 CNGA2Q16280 664 aa11.67□□□□□ -0.54
SMPD4-218ENST00000482171 RAB44Q7Z6P3 723 aaPredicted RBP11.67□□□□□ -0.54
SMPD4-218ENST00000482171 EFHBQ8N7U6 833 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms