RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 MAP10Q9P2G4 905 aa7.06□□□□□ -1.28
HDAC3-206ENST00000471968 PISDQ9UG56 409 aa7.06□□□□□ -1.28
HDAC3-206ENST00000471968 TUBGCP4Q9UGJ1 667 aa7.06□□□□□ -1.28
HDAC3-206ENST00000471968 U3KQA8 63 aa7.06□□□□□ -1.28
HDAC3-206ENST00000471968 PLXNA2O75051 1894 aa7.06□□□□□ -1.28
HDAC3-206ENST00000471968 COL27A1Q8IZC6 1860 aaPredicted RBP7.06□□□□□ -1.28
HDAC3-206ENST00000471968 CROCCQ5TZA2 2017 aa7.06□□□□□ -1.28
HDAC3-206ENST00000471968 TRIP11Q15643 1979 aa7.06□□□□□ -1.28
HDAC3-206ENST00000471968 CPED1A4D0V7 1026 aa7.05□□□□□ -1.28
HDAC3-206ENST00000471968 AGRPO00253 132 aa7.05□□□□□ -1.28
HDAC3-206ENST00000471968 ZBTB39O15060 712 aa7.05□□□□□ -1.28
HDAC3-206ENST00000471968 ADAMTS3O15072 1205 aa7.05□□□□□ -1.28
HDAC3-206ENST00000471968 DKC1O60832 514 aaKnown RBP eCLIP7.05□□□□□ -1.28
HDAC3-206ENST00000471968 PRPF40AO75400 957 aaKnown RBP7.05□□□□□ -1.28
HDAC3-206ENST00000471968 TCEA3O75764 348 aa7.05□□□□□ -1.28
HDAC3-206ENST00000471968 DDAH1O94760 285 aa7.05□□□□□ -1.28
HDAC3-206ENST00000471968 NOL4O94818 638 aa7.05□□□□□ -1.28
HDAC3-206ENST00000471968 JMJD7P0C870 316 aa7.05□□□□□ -1.28
HDAC3-206ENST00000471968 PRKAR1AP10644 381 aa7.05□□□□□ -1.28
HDAC3-206ENST00000471968 KCNE1P15382 129 aa7.05□□□□□ -1.28
HDAC3-206ENST00000471968 TYMPP19971 482 aa7.05□□□□□ -1.28
HDAC3-206ENST00000471968 DGKAP23743 735 aa7.05□□□□□ -1.28
HDAC3-206ENST00000471968 ZNF132P52740 706 aa7.05□□□□□ -1.28
HDAC3-206ENST00000471968 KRTAP10-9P60411 292 aa7.05□□□□□ -1.28
HDAC3-206ENST00000471968 SSRP1Q08945 709 aaKnown RBP7.05□□□□□ -1.28
HDAC3-206ENST00000471968 DHX8Q14562 1220 aaKnown RBP7.05□□□□□ -1.28
HDAC3-206ENST00000471968 CDKN3Q16667 212 aa7.05□□□□□ -1.28
HDAC3-206ENST00000471968 FAM187BQ17R55 369 aa7.05□□□□□ -1.28
HDAC3-206ENST00000471968 C14orf28Q4W4Y0 310 aa7.05□□□□□ -1.28
HDAC3-206ENST00000471968 PRR30Q53SZ7 412 aaPredicted RBP7.05□□□□□ -1.28
HDAC3-206ENST00000471968 B3GNT9Q6UX72 402 aa7.05□□□□□ -1.28
HDAC3-206ENST00000471968 DHX32Q7L7V1 743 aaKnown RBP7.05□□□□□ -1.28
HDAC3-206ENST00000471968 OTUD6AQ7L8S5 288 aa7.05□□□□□ -1.28
HDAC3-206ENST00000471968 DSG4Q86SJ6 1040 aa7.05□□□□□ -1.28
HDAC3-206ENST00000471968 LRRTM3Q86VH5 581 aa7.05□□□□□ -1.28
HDAC3-206ENST00000471968 ZBTB8OSQ8IWT0 167 aa7.05□□□□□ -1.28
HDAC3-206ENST00000471968 C2orf15Q8WU43 125 aaKnown RBP7.05□□□□□ -1.28
HDAC3-206ENST00000471968 APOBEC4Q8WW27 367 aaKnown RBP7.05□□□□□ -1.28
HDAC3-206ENST00000471968 EVI5LQ96CN4 794 aa7.05□□□□□ -1.28
HDAC3-206ENST00000471968 CCDC136Q96JN2 1154 aa7.05□□□□□ -1.28
HDAC3-206ENST00000471968 MYRFLQ96LU7 910 aa7.05□□□□□ -1.28
HDAC3-206ENST00000471968 CCDC94Q9BW85 323 aaPredicted RBP7.05□□□□□ -1.28
HDAC3-206ENST00000471968 MFRPQ9BY79 579 aa7.05□□□□□ -1.28
HDAC3-206ENST00000471968 SLC29A3Q9BZD2 475 aa7.05□□□□□ -1.28
HDAC3-206ENST00000471968 POLR3FQ9H1D9 316 aaPredicted RBP7.05□□□□□ -1.28
HDAC3-206ENST00000471968 TTC12Q9H892 705 aaPredicted RBP7.05□□□□□ -1.28
HDAC3-206ENST00000471968 SPHK2Q9NRA0 654 aa7.05□□□□□ -1.28
HDAC3-206ENST00000471968 EVA1BQ9NVM1 165 aa7.05□□□□□ -1.28
HDAC3-206ENST00000471968 RRN3Q9NYV6 651 aa7.05□□□□□ -1.28
HDAC3-206ENST00000471968 FOXJ2Q9P0K8 574 aa7.05□□□□□ -1.28
HDAC3-206ENST00000471968 TBC1D14Q9P2M4 693 aa7.05□□□□□ -1.28
HDAC3-206ENST00000471968 ANK2Q01484 3957 aa7.04□□□□□ -1.28
HDAC3-206ENST00000471968 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.04□□□□□ -1.28
HDAC3-206ENST00000471968 NEDD8-MDP1E9PL57 170 aa7.04□□□□□ -1.28
HDAC3-206ENST00000471968 EML1O00423 815 aa7.04□□□□□ -1.28
HDAC3-206ENST00000471968 NKX2-8O15522 239 aa7.04□□□□□ -1.28
HDAC3-206ENST00000471968 ALPPL2P10696 532 aa7.04□□□□□ -1.28
HDAC3-206ENST00000471968 LIFP15018 202 aa7.04□□□□□ -1.28
HDAC3-206ENST00000471968 AARSP49588 968 aaKnown RBP eCLIP7.04□□□□□ -1.28
HDAC3-206ENST00000471968 ART1P52961 327 aa7.04□□□□□ -1.28
HDAC3-206ENST00000471968 MFAP1P55081 439 aaKnown RBP7.04□□□□□ -1.28
HDAC3-206ENST00000471968 SLC7A9P82251 487 aa7.04□□□□□ -1.28
HDAC3-206ENST00000471968 TRDNQ13061 729 aa7.04□□□□□ -1.28
HDAC3-206ENST00000471968 EIF3IQ13347 325 aaKnown RBP7.04□□□□□ -1.28
HDAC3-206ENST00000471968 ZNF177Q13360 481 aaPredicted RBP7.04□□□□□ -1.28
HDAC3-206ENST00000471968 SAFBQ15424 915 aaKnown RBP eCLIP7.04□□□□□ -1.28
HDAC3-206ENST00000471968 DEFB109BQ30KR1 87 aa7.04□□□□□ -1.28
HDAC3-206ENST00000471968 SLC45A4Q5BKX6 768 aa7.04□□□□□ -1.28
HDAC3-206ENST00000471968 NUGGCQ68CJ6 796 aa7.04□□□□□ -1.28
HDAC3-206ENST00000471968 PPP4R3AQ6IN85 833 aa7.04□□□□□ -1.28
HDAC3-206ENST00000471968 GUSBP11Q6P575 273 aa7.04□□□□□ -1.28
HDAC3-206ENST00000471968 Q71RC1 249 aaPredicted RBP7.04□□□□□ -1.28
HDAC3-206ENST00000471968 EFL1Q7Z2Z2 1120 aaKnown RBP7.04□□□□□ -1.28
HDAC3-206ENST00000471968 RAB11FIP4Q86YS3 637 aa7.04□□□□□ -1.28
HDAC3-206ENST00000471968 EXOC6Q8TAG9 804 aa7.04□□□□□ -1.28
HDAC3-206ENST00000471968 PANK1Q8TE04 598 aa7.04□□□□□ -1.28
HDAC3-206ENST00000471968 P2RY11Q96G91 374 aa7.04□□□□□ -1.28
HDAC3-206ENST00000471968 SERAC1Q96JX3 654 aa7.04□□□□□ -1.28
HDAC3-206ENST00000471968 XPO6Q96QU8 1125 aaKnown RBP7.04□□□□□ -1.28
HDAC3-206ENST00000471968 RNF38Q9H0F5 515 aa7.04□□□□□ -1.28
HDAC3-206ENST00000471968 GLT8D2Q9H1C3 349 aa7.04□□□□□ -1.28
HDAC3-206ENST00000471968 USP29Q9HBJ7 922 aa7.04□□□□□ -1.28
HDAC3-206ENST00000471968 SGK2Q9HBY8 427 aa7.04□□□□□ -1.28
HDAC3-206ENST00000471968 CNTN3Q9P232 1028 aa7.04□□□□□ -1.28
HDAC3-206ENST00000471968 DAAM1Q9Y4D1 1078 aa7.04□□□□□ -1.28
HDAC3-206ENST00000471968 FLNAP21333 2647 aaKnown RBP7.04□□□□□ -1.28
HDAC3-206ENST00000471968 MXRA5Q9NR99 2828 aa7.04□□□□□ -1.28
HDAC3-206ENST00000471968 DOCK9Q9BZ29 2069 aa7.04□□□□□ -1.28
HDAC3-206ENST00000471968 PTPRJQ12913 1337 aa7.03□□□□□ -1.28
HDAC3-206ENST00000471968 A0A1W2PQ27 194 aa7.03□□□□□ -1.28
HDAC3-206ENST00000471968 A0A1W2PQ64 194 aa7.03□□□□□ -1.28
HDAC3-206ENST00000471968 A0A1W2PQC6 194 aa7.03□□□□□ -1.28
HDAC3-206ENST00000471968 ZNF891A8MT65 544 aaPredicted RBP7.03□□□□□ -1.28
HDAC3-206ENST00000471968 ACKR2O00590 384 aa7.03□□□□□ -1.28
HDAC3-206ENST00000471968 SH2B2O14492 632 aaPredicted RBP7.03□□□□□ -1.28
HDAC3-206ENST00000471968 GRID2O43424 1007 aa7.03□□□□□ -1.28
HDAC3-206ENST00000471968 JAK2O60674 1132 aa7.03□□□□□ -1.28
HDAC3-206ENST00000471968 EPHX1P07099 455 aa7.03□□□□□ -1.28
HDAC3-206ENST00000471968 GIMD1P0DJR0 217 aa7.03□□□□□ -1.28
HDAC3-206ENST00000471968 ODC1P11926 461 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms