RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 FBXW8Q8N3Y1 598 aa14.24□□□□□ -0.13
NPHP4-207ENST00000470763 CCDC33Q8N5R6 958 aa14.24□□□□□ -0.13
NPHP4-207ENST00000470763 TFB1MQ8WVM0 346 aaKnown RBP14.24□□□□□ -0.13
NPHP4-207ENST00000470763 ZFRQ96KR1 1074 aaKnown RBP14.24□□□□□ -0.13
NPHP4-207ENST00000470763 C3orf70A6NLC5 250 aaPredicted RBP14.24□□□□□ -0.13
NPHP4-207ENST00000470763 KCNA4P22459 653 aa14.24□□□□□ -0.13
NPHP4-207ENST00000470763 EIF3EP60228 445 aaKnown RBP14.24□□□□□ -0.13
NPHP4-207ENST00000470763 MRPS22P82650 360 aaKnown RBP14.24□□□□□ -0.13
NPHP4-207ENST00000470763 LPIN1Q14693 890 aa14.24□□□□□ -0.13
NPHP4-207ENST00000470763 CYTH1Q15438 398 aa14.24□□□□□ -0.13
NPHP4-207ENST00000470763 ZNF394Q53GI3 561 aa14.24□□□□□ -0.13
NPHP4-207ENST00000470763 TDRD10Q5VZ19 366 aaKnown RBP14.24□□□□□ -0.13
NPHP4-207ENST00000470763 SCARA3Q6AZY7 606 aa14.24□□□□□ -0.13
NPHP4-207ENST00000470763 MAP4K3Q8IVH8 894 aa14.24□□□□□ -0.13
NPHP4-207ENST00000470763 PIWIL2Q8TC59 973 aaKnown RBP14.24□□□□□ -0.13
NPHP4-207ENST00000470763 VCPIP1Q96JH7 1222 aa14.24□□□□□ -0.13
NPHP4-207ENST00000470763 Q9H521 79 aa14.24□□□□□ -0.13
NPHP4-207ENST00000470763 HOMER2Q9NSB8 354 aa14.24□□□□□ -0.13
NPHP4-207ENST00000470763 FAF1Q9UNN5 650 aaPredicted RBP14.24□□□□□ -0.13
NPHP4-207ENST00000470763 LOXHD1Q8IVV2 1947 aa14.23□□□□□ -0.13
NPHP4-207ENST00000470763 PTPRJQ12913 1337 aa14.23□□□□□ -0.13
NPHP4-207ENST00000470763 PEX1O43933 1283 aa14.23□□□□□ -0.13
NPHP4-207ENST00000470763 RBP3P10745 1247 aa14.23□□□□□ -0.13
NPHP4-207ENST00000470763 MMP8P22894 467 aa14.23□□□□□ -0.13
NPHP4-207ENST00000470763 IL1R2P27930 398 aa14.23□□□□□ -0.13
NPHP4-207ENST00000470763 STT3AP46977 705 aa14.23□□□□□ -0.13
NPHP4-207ENST00000470763 FASTKD1Q53R41 847 aaKnown RBP14.23□□□□□ -0.13
NPHP4-207ENST00000470763 XKR9Q5GH70 373 aa14.23□□□□□ -0.13
NPHP4-207ENST00000470763 PPP6R3Q5H9R7 873 aaPredicted RBP14.23□□□□□ -0.13
NPHP4-207ENST00000470763 ANGEL2Q5VTE6 544 aaKnown RBP14.23□□□□□ -0.13
NPHP4-207ENST00000470763 USP37Q86T82 979 aa14.23□□□□□ -0.13
NPHP4-207ENST00000470763 GPD1LQ8N335 351 aa14.23□□□□□ -0.13
NPHP4-207ENST00000470763 BSNDQ8WZ55 320 aa14.23□□□□□ -0.13
NPHP4-207ENST00000470763 YIPF2Q9BWQ6 316 aa14.23□□□□□ -0.13
NPHP4-207ENST00000470763 KCNH7Q9NS40 1196 aa14.23□□□□□ -0.13
NPHP4-207ENST00000470763 PNPOQ9NVS9 261 aa14.23□□□□□ -0.13
NPHP4-207ENST00000470763 THAP1Q9NVV9 213 aa14.23□□□□□ -0.13
NPHP4-207ENST00000470763 CSH1P0DML2 217 aa14.23□□□□□ -0.13
NPHP4-207ENST00000470763 CSH2P0DML3 217 aa14.23□□□□□ -0.13
NPHP4-207ENST00000470763 CD1EP15812 388 aa14.23□□□□□ -0.13
NPHP4-207ENST00000470763 NELFEP18615 380 aaKnown RBP14.23□□□□□ -0.13
NPHP4-207ENST00000470763 CDH2P19022 906 aaPredicted RBP14.23□□□□□ -0.13
NPHP4-207ENST00000470763 HDAC4P56524 1084 aa14.23□□□□□ -0.13
NPHP4-207ENST00000470763 CUL2Q13617 745 aa14.23□□□□□ -0.13
NPHP4-207ENST00000470763 SLC44A4Q53GD3 710 aa14.23□□□□□ -0.13
NPHP4-207ENST00000470763 PDPK2PQ6A1A2 396 aa14.23□□□□□ -0.13
NPHP4-207ENST00000470763 TATDN1Q6P1N9 297 aa14.23□□□□□ -0.13
NPHP4-207ENST00000470763 NPNTQ6UXI9 565 aa14.23□□□□□ -0.13
NPHP4-207ENST00000470763 TRIM72Q6ZMU5 477 aa14.23□□□□□ -0.13
NPHP4-207ENST00000470763 MAVSQ7Z434 540 aa14.23□□□□□ -0.13
NPHP4-207ENST00000470763 RFX6Q8HWS3 928 aa14.23□□□□□ -0.13
NPHP4-207ENST00000470763 NUP93Q8N1F7 819 aa14.23□□□□□ -0.13
NPHP4-207ENST00000470763 FNDC8Q8TC99 324 aa14.23□□□□□ -0.13
NPHP4-207ENST00000470763 IRGQQ8WZA9 623 aa14.23□□□□□ -0.13
NPHP4-207ENST00000470763 TMIGD2Q96BF3 282 aa14.23□□□□□ -0.13
NPHP4-207ENST00000470763 KMT5AQ9NQR1 393 aa14.23□□□□□ -0.13
NPHP4-207ENST00000470763 PCSK1NQ9UHG2 260 aa14.23□□□□□ -0.13
NPHP4-207ENST00000470763 PAIP2BQ9ULR5 123 aaKnown RBP14.23□□□□□ -0.13
NPHP4-207ENST00000470763 GNEQ9Y223 722 aaKnown RBP14.23□□□□□ -0.13
NPHP4-207ENST00000470763 DCXO43602 365 aa14.22□□□□□ -0.13
NPHP4-207ENST00000470763 KLHL2O95198 593 aa14.22□□□□□ -0.13
NPHP4-207ENST00000470763 C1QAP02745 245 aa14.22□□□□□ -0.13
NPHP4-207ENST00000470763 VIL1P09327 827 aaKnown RBP14.22□□□□□ -0.13
NPHP4-207ENST00000470763 QARSP47897 775 aaKnown RBP14.22□□□□□ -0.13
NPHP4-207ENST00000470763 CDKL1Q00532 357 aa14.22□□□□□ -0.13
NPHP4-207ENST00000470763 LRRC38Q5VT99 294 aa14.22□□□□□ -0.13
NPHP4-207ENST00000470763 APOBEC3HQ6NTF7 200 aaKnown RBP14.22□□□□□ -0.13
NPHP4-207ENST00000470763 ATG14Q6ZNE5 492 aa14.22□□□□□ -0.13
NPHP4-207ENST00000470763 ZNF606Q8WXB4 792 aa14.22□□□□□ -0.13
NPHP4-207ENST00000470763 FAF2Q96CS3 445 aa14.22□□□□□ -0.13
NPHP4-207ENST00000470763 GMCL1Q96IK5 515 aa14.22□□□□□ -0.13
NPHP4-207ENST00000470763 COPS7BQ9H9Q2 264 aaPredicted RBP14.22□□□□□ -0.13
NPHP4-207ENST00000470763 DDX56Q9NY93 547 aaKnown RBP14.22□□□□□ -0.13
NPHP4-207ENST00000470763 SLC9A2Q9UBY0 812 aa14.22□□□□□ -0.13
NPHP4-207ENST00000470763 ZC3H7BQ9UGR2 993 aaKnown RBP14.22□□□□□ -0.13
NPHP4-207ENST00000470763 ITGA11Q9UKX5 1188 aa14.22□□□□□ -0.13
NPHP4-207ENST00000470763 CEPT1Q9Y6K0 416 aa14.22□□□□□ -0.13
NPHP4-207ENST00000470763 ZNF536O15090 1300 aa14.22□□□□□ -0.13
NPHP4-207ENST00000470763 LTBP3Q9NS15 1303 aa14.22□□□□□ -0.13
NPHP4-207ENST00000470763 GH2P01242 217 aa14.22□□□□□ -0.13
NPHP4-207ENST00000470763 ACOT2P49753 483 aa14.22□□□□□ -0.13
NPHP4-207ENST00000470763 DMP1Q13316 513 aaPredicted RBP14.22□□□□□ -0.13
NPHP4-207ENST00000470763 TAF5Q15542 800 aa14.22□□□□□ -0.13
NPHP4-207ENST00000470763 SMAD1Q15797 465 aaKnown RBP14.22□□□□□ -0.13
NPHP4-207ENST00000470763 ABCB5Q2M3G0 1257 aa14.22□□□□□ -0.13
NPHP4-207ENST00000470763 LRRN4Q8WUT4 740 aa14.22□□□□□ -0.13
NPHP4-207ENST00000470763 LRGUKQ96M69 825 aa14.22□□□□□ -0.13
NPHP4-207ENST00000470763 ST6GALNAC4Q9H4F1 302 aa14.22□□□□□ -0.13
NPHP4-207ENST00000470763 PSMD13Q9UNM6 376 aa14.22□□□□□ -0.13
NPHP4-207ENST00000470763 FAM58BPP0C7Q3 252 aa14.22□□□□□ -0.13
NPHP4-207ENST00000470763 FBXL18Q96ME1 805 aa14.22□□□□□ -0.13
NPHP4-207ENST00000470763 MAN1C1Q9NR34 630 aa14.22□□□□□ -0.13
NPHP4-207ENST00000470763 TMEM221A6NGB7 291 aa14.21□□□□□ -0.13
NPHP4-207ENST00000470763 ZC3H11AO75152 810 aaKnown RBP eCLIP14.21□□□□□ -0.13
NPHP4-207ENST00000470763 VNN1O95497 513 aa14.21□□□□□ -0.13
NPHP4-207ENST00000470763 EIF4BP23588 611 aaKnown RBP14.21□□□□□ -0.13
NPHP4-207ENST00000470763 PSMA2P25787 234 aa14.21□□□□□ -0.13
NPHP4-207ENST00000470763 HOXA10P31260 410 aaPredicted RBP14.21□□□□□ -0.13
NPHP4-207ENST00000470763 L1CAMP32004 1257 aa14.21□□□□□ -0.13
NPHP4-207ENST00000470763 PTPN7P35236 360 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms