RNA–Protein interactions for RNA: ENST00000466832.5

TRA2B-209, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-209ENST00000466832 ITGAVP06756 1048 aa6.05□□□□□ -1.44
TRA2B-209ENST00000466832 P4HA1P13674 534 aa6.05□□□□□ -1.44
TRA2B-209ENST00000466832 NFKB1P19838 968 aa6.05□□□□□ -1.44
TRA2B-209ENST00000466832 RRM1P23921 792 aa6.05□□□□□ -1.44
TRA2B-209ENST00000466832 IVDP26440 423 aa6.05□□□□□ -1.44
TRA2B-209ENST00000466832 MARCKSL1P49006 195 aa6.05□□□□□ -1.44
TRA2B-209ENST00000466832 RNASE9P60153 205 aaKnown RBP6.05□□□□□ -1.44
TRA2B-209ENST00000466832 KRT17Q04695 432 aa6.05□□□□□ -1.44
TRA2B-209ENST00000466832 PDCLQ13371 301 aa6.05□□□□□ -1.44
TRA2B-209ENST00000466832 PPP1R7Q15435 360 aa6.05□□□□□ -1.44
TRA2B-209ENST00000466832 CCDC142Q17RM4 750 aa6.05□□□□□ -1.44
TRA2B-209ENST00000466832 SPRED3Q2MJR0 410 aa6.05□□□□□ -1.44
TRA2B-209ENST00000466832 DDX42Q86XP3 938 aaKnown RBP eCLIP6.05□□□□□ -1.44
TRA2B-209ENST00000466832 ZCCHC9Q8N567 271 aaKnown RBP6.05□□□□□ -1.44
TRA2B-209ENST00000466832 LINC01465Q8N7H1 131 aa6.05□□□□□ -1.44
TRA2B-209ENST00000466832 CELF2-AS1Q8N7Q2 184 aa6.05□□□□□ -1.44
TRA2B-209ENST00000466832 FAM169BQ8N8A8 192 aa6.05□□□□□ -1.44
TRA2B-209ENST00000466832 FBXO25Q8TCJ0 367 aa6.05□□□□□ -1.44
TRA2B-209ENST00000466832 ANKRD36BP1Q96IX9 119 aa6.05□□□□□ -1.44
TRA2B-209ENST00000466832 XPO6Q96QU8 1125 aaKnown RBP6.05□□□□□ -1.44
TRA2B-209ENST00000466832 CCT8L2Q96SF2 557 aa6.05□□□□□ -1.44
TRA2B-209ENST00000466832 CCDC77Q9BR77 488 aa6.05□□□□□ -1.44
TRA2B-209ENST00000466832 HAPLN2Q9GZV7 340 aa6.05□□□□□ -1.44
TRA2B-209ENST00000466832 DPH5Q9H2P9 285 aa6.05□□□□□ -1.44
TRA2B-209ENST00000466832 ASB7Q9H672 318 aa6.05□□□□□ -1.44
TRA2B-209ENST00000466832 SLC28A3Q9HAS3 691 aa6.05□□□□□ -1.44
TRA2B-209ENST00000466832 APOBEC3GQ9HC16 384 aaKnown RBP6.05□□□□□ -1.44
TRA2B-209ENST00000466832 VTA1Q9NP79 307 aa6.05□□□□□ -1.44
TRA2B-209ENST00000466832 RSPH14Q9UHP6 348 aa6.05□□□□□ -1.44
TRA2B-209ENST00000466832 FZD1Q9UP38 647 aa6.05□□□□□ -1.44
TRA2B-209ENST00000466832 SHOC2Q9UQ13 582 aa6.05□□□□□ -1.44
TRA2B-209ENST00000466832 NR2E1Q9Y466 385 aa6.05□□□□□ -1.44
TRA2B-209ENST00000466832 FAM169AQ9Y6X4 670 aa6.05□□□□□ -1.44
TRA2B-209ENST00000466832 ZNF462Q96JM2 2506 aa6.05□□□□□ -1.44
TRA2B-209ENST00000466832 A0A096LPE4 126 aa6.05□□□□□ -1.44
TRA2B-209ENST00000466832 A0A1W2PPZ6 126 aa6.05□□□□□ -1.44
TRA2B-209ENST00000466832 PARNO95453 639 aaKnown RBP6.05□□□□□ -1.44
TRA2B-209ENST00000466832 TTC4O95801 387 aa6.05□□□□□ -1.44
TRA2B-209ENST00000466832 KRT7P08729 469 aa6.05□□□□□ -1.44
TRA2B-209ENST00000466832 SETSIPP0DME0 302 aa6.05□□□□□ -1.44
TRA2B-209ENST00000466832 KLRC2P26717 231 aa6.05□□□□□ -1.44
TRA2B-209ENST00000466832 FLT3P36888 993 aa6.05□□□□□ -1.44
TRA2B-209ENST00000466832 GABRB2P47870 512 aa6.05□□□□□ -1.44
TRA2B-209ENST00000466832 CCT5P48643 541 aa6.05□□□□□ -1.44
TRA2B-209ENST00000466832 PLTPP55058 493 aa6.05□□□□□ -1.44
TRA2B-209ENST00000466832 IRX3P78415 501 aaPredicted RBP6.05□□□□□ -1.44
TRA2B-209ENST00000466832 MPP2Q14168 576 aa6.05□□□□□ -1.44
TRA2B-209ENST00000466832 MORF4L2Q15014 288 aa6.05□□□□□ -1.44
TRA2B-209ENST00000466832 TRADDQ15628 312 aa6.05□□□□□ -1.44
TRA2B-209ENST00000466832 CCDC62Q6P9F0 684 aa6.05□□□□□ -1.44
TRA2B-209ENST00000466832 C4orf22Q6V702 233 aa6.05□□□□□ -1.44
TRA2B-209ENST00000466832 THNSL1Q8IYQ7 743 aa6.05□□□□□ -1.44
TRA2B-209ENST00000466832 ZDHHC14Q8IZN3 488 aa6.05□□□□□ -1.44
TRA2B-209ENST00000466832 GATAD2BQ8WXI9 593 aa6.05□□□□□ -1.44
TRA2B-209ENST00000466832 FERD3LQ96RJ6 166 aa6.05□□□□□ -1.44
TRA2B-209ENST00000466832 POP1Q99575 1024 aaKnown RBP6.05□□□□□ -1.44
TRA2B-209ENST00000466832 TARS2Q9BW92 718 aaKnown RBP6.05□□□□□ -1.44
TRA2B-209ENST00000466832 FRMD8Q9BZ67 464 aaPredicted RBP6.05□□□□□ -1.44
TRA2B-209ENST00000466832 OSBPL8Q9BZF1 889 aa6.05□□□□□ -1.44
TRA2B-209ENST00000466832 DNAI2Q9GZS0 605 aa6.05□□□□□ -1.44
TRA2B-209ENST00000466832 BTBD7Q9P203 1132 aa6.05□□□□□ -1.44
TRA2B-209ENST00000466832 ATP8A1Q9Y2Q0 1164 aa6.05□□□□□ -1.44
TRA2B-209ENST00000466832 SNX24Q9Y343 169 aa6.05□□□□□ -1.44
TRA2B-209ENST00000466832 PCDHGC4Q9Y5F7 938 aa6.05□□□□□ -1.44
TRA2B-209ENST00000466832 CHD9Q3L8U1 2897 aa6.04□□□□□ -1.44
TRA2B-209ENST00000466832 SIGLEC16A6NMB1 481 aa6.04□□□□□ -1.44
TRA2B-209ENST00000466832 TMEM110-MUSTN1A8MSY1 372 aa6.04□□□□□ -1.44
TRA2B-209ENST00000466832 ZBTB42B2RXF5 422 aa6.04□□□□□ -1.44
TRA2B-209ENST00000466832 RASGRF2O14827 1237 aa6.04□□□□□ -1.44
TRA2B-209ENST00000466832 TCF7P36402 384 aaPredicted RBP6.04□□□□□ -1.44
TRA2B-209ENST00000466832 SNX16P57768 344 aa6.04□□□□□ -1.44
TRA2B-209ENST00000466832 MAGOHP61326 146 aaKnown RBP6.04□□□□□ -1.44
TRA2B-209ENST00000466832 LAMTOR4Q0VGL1 99 aa6.04□□□□□ -1.44
TRA2B-209ENST00000466832 ZNF268Q14587 947 aaPredicted RBP6.04□□□□□ -1.44
TRA2B-209ENST00000466832 TTLL4Q14679 1199 aa6.04□□□□□ -1.44
TRA2B-209ENST00000466832 SPDYAQ5MJ70 313 aa6.04□□□□□ -1.44
TRA2B-209ENST00000466832 GKAP1Q5VSY0 366 aaPredicted RBP6.04□□□□□ -1.44
TRA2B-209ENST00000466832 WDR78Q5VTH9 848 aa6.04□□□□□ -1.44
TRA2B-209ENST00000466832 HIBCHQ6NVY1 386 aaPredicted RBP6.04□□□□□ -1.44
TRA2B-209ENST00000466832 DNAJC24Q6P3W2 148 aa6.04□□□□□ -1.44
TRA2B-209ENST00000466832 BNC2Q6ZN30 1099 aaPredicted RBP6.04□□□□□ -1.44
TRA2B-209ENST00000466832 ANKS1BQ7Z6G8 1248 aa6.04□□□□□ -1.44
TRA2B-209ENST00000466832 LILRB2Q8N423 598 aa6.04□□□□□ -1.44
TRA2B-209ENST00000466832 SH2D3CQ8N5H7 860 aa6.04□□□□□ -1.44
TRA2B-209ENST00000466832 ZNF606Q8WXB4 792 aa6.04□□□□□ -1.44
TRA2B-209ENST00000466832 GLG1Q92896 1179 aa6.04□□□□□ -1.44
TRA2B-209ENST00000466832 NXPE3Q969Y0 559 aa6.04□□□□□ -1.44
TRA2B-209ENST00000466832 TMEM143Q96AN5 459 aa6.04□□□□□ -1.44
TRA2B-209ENST00000466832 GRAMD1AQ96CP6 724 aa6.04□□□□□ -1.44
TRA2B-209ENST00000466832 CYFIP2Q96F07 1278 aa6.04□□□□□ -1.44
TRA2B-209ENST00000466832 CHMP6Q96FZ7 201 aa6.04□□□□□ -1.44
TRA2B-209ENST00000466832 FGD4Q96M96 766 aa6.04□□□□□ -1.44
TRA2B-209ENST00000466832 SLITRK1Q96PX8 696 aa6.04□□□□□ -1.44
TRA2B-209ENST00000466832 SENP6Q9GZR1 1112 aaPredicted RBP6.04□□□□□ -1.44
TRA2B-209ENST00000466832 MIR1-1HGQ9H1L0 117 aa6.04□□□□□ -1.44
TRA2B-209ENST00000466832 PCDH9Q9HC56 1237 aa6.04□□□□□ -1.44
TRA2B-209ENST00000466832 PRDM5Q9NQX1 630 aaPredicted RBP6.04□□□□□ -1.44
TRA2B-209ENST00000466832 GPN3Q9UHW5 284 aaPredicted RBP6.04□□□□□ -1.44
TRA2B-209ENST00000466832 C2CD2Q9Y426 696 aa6.04□□□□□ -1.44
TRA2B-209ENST00000466832 NUB1Q9Y5A7 615 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms