RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 SLC26A9Q7LBE3 791 aa6.67□□□□□ -1.34
SF3B1-206ENST00000462613 TMEM150AQ86TG1 271 aa6.67□□□□□ -1.34
SF3B1-206ENST00000462613 PHF13Q86YI8 300 aaPredicted RBP6.67□□□□□ -1.34
SF3B1-206ENST00000462613 MIB1Q86YT6 1006 aa6.67□□□□□ -1.34
SF3B1-206ENST00000462613 GPIHBP1Q8IV16 184 aa6.67□□□□□ -1.34
SF3B1-206ENST00000462613 CCDC117Q8IWD4 279 aaPredicted RBP6.67□□□□□ -1.34
SF3B1-206ENST00000462613 UNC45BQ8IWX7 931 aa6.67□□□□□ -1.34
SF3B1-206ENST00000462613 TXLNBQ8N3L3 684 aa6.67□□□□□ -1.34
SF3B1-206ENST00000462613 CPA6Q8N4T0 437 aa6.67□□□□□ -1.34
SF3B1-206ENST00000462613 SH3RF2Q8TEC5 729 aa6.67□□□□□ -1.34
SF3B1-206ENST00000462613 EDEM1Q92611 657 aa6.67□□□□□ -1.34
SF3B1-206ENST00000462613 DNASE1L2Q92874 299 aa6.67□□□□□ -1.34
SF3B1-206ENST00000462613 FGF14Q92915 247 aa6.67□□□□□ -1.34
SF3B1-206ENST00000462613 USP13Q92995 863 aaPredicted RBP6.67□□□□□ -1.34
SF3B1-206ENST00000462613 ATP2A3Q93084 1043 aa6.67□□□□□ -1.34
SF3B1-206ENST00000462613 RNF34Q969K3 372 aa6.67□□□□□ -1.34
SF3B1-206ENST00000462613 PLD4Q96BZ4 506 aa6.67□□□□□ -1.34
SF3B1-206ENST00000462613 MSANTD3Q96H12 275 aa6.67□□□□□ -1.34
SF3B1-206ENST00000462613 SHDQ96IW2 340 aa6.67□□□□□ -1.34
SF3B1-206ENST00000462613 ZSWIM3Q96MP5 696 aa6.67□□□□□ -1.34
SF3B1-206ENST00000462613 CYP2S1Q96SQ9 504 aa6.67□□□□□ -1.34
SF3B1-206ENST00000462613 DNAJC7Q99615 494 aa6.67□□□□□ -1.34
SF3B1-206ENST00000462613 DDX50Q9BQ39 737 aaKnown RBP6.67□□□□□ -1.34
SF3B1-206ENST00000462613 C11orf70Q9BRQ4 267 aa6.67□□□□□ -1.34
SF3B1-206ENST00000462613 CCSER2Q9H7U1 834 aa6.67□□□□□ -1.34
SF3B1-206ENST00000462613 FAM204AQ9H8W3 233 aa6.67□□□□□ -1.34
SF3B1-206ENST00000462613 GRPEL1Q9HAV7 217 aa6.67□□□□□ -1.34
SF3B1-206ENST00000462613 MRPL47Q9HD33 250 aaKnown RBP6.67□□□□□ -1.34
SF3B1-206ENST00000462613 SMPD4Q9NXE4 827 aa6.67□□□□□ -1.34
SF3B1-206ENST00000462613 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.67□□□□□ -1.341e-11■□□□□ 8
SF3B1-206ENST00000462613 ADAMTS1Q9UHI8 967 aa6.67□□□□□ -1.34
SF3B1-206ENST00000462613 SLC12A6Q9UHW9 1150 aa6.67□□□□□ -1.34
SF3B1-206ENST00000462613 DUSP12Q9UNI6 340 aa6.67□□□□□ -1.34
SF3B1-206ENST00000462613 HBS1LQ9Y450 684 aaKnown RBP6.67□□□□□ -1.34
SF3B1-206ENST00000462613 SCINQ9Y6U3 715 aa6.67□□□□□ -1.34
SF3B1-206ENST00000462613 EYSQ5T1H1 3165 aa6.67□□□□□ -1.34
SF3B1-206ENST00000462613 DOCK4Q8N1I0 1966 aa6.66□□□□□ -1.34
SF3B1-206ENST00000462613 C5orf42Q9H799 3197 aa6.66□□□□□ -1.34
SF3B1-206ENST00000462613 ATG2BQ96BY7 2078 aa6.66□□□□□ -1.34
SF3B1-206ENST00000462613 TMCO5BA8MYB1 307 aa6.66□□□□□ -1.34
SF3B1-206ENST00000462613 TNFRSF10AO00220 468 aa6.66□□□□□ -1.34
SF3B1-206ENST00000462613 LEFTY2O00292 366 aa6.66□□□□□ -1.34
SF3B1-206ENST00000462613 DAB1O75553 588 aa6.66□□□□□ -1.34
SF3B1-206ENST00000462613 PRAMEF12O95522 483 aa6.66□□□□□ -1.34
SF3B1-206ENST00000462613 F9P00740 461 aa6.66□□□□□ -1.34
SF3B1-206ENST00000462613 ERBB2P04626 1255 aa6.66□□□□□ -1.34
SF3B1-206ENST00000462613 CYBBP04839 570 aa6.66□□□□□ -1.34
SF3B1-206ENST00000462613 ASGR2P07307 311 aa6.66□□□□□ -1.34
SF3B1-206ENST00000462613 CFHP08603 1231 aa6.66□□□□□ -1.34
SF3B1-206ENST00000462613 IRF1P10914 325 aa6.66□□□□□ -1.34
SF3B1-206ENST00000462613 KRT3P12035 628 aa6.66□□□□□ -1.34
SF3B1-206ENST00000462613 CHRNB2P17787 502 aa6.66□□□□□ -1.34
SF3B1-206ENST00000462613 SDC4P31431 198 aa6.66□□□□□ -1.34
SF3B1-206ENST00000462613 NOS2P35228 1153 aa6.66□□□□□ -1.34
SF3B1-206ENST00000462613 CHKAP35790 457 aa6.66□□□□□ -1.34
SF3B1-206ENST00000462613 VIPR2P41587 438 aa6.66□□□□□ -1.34
SF3B1-206ENST00000462613 GABRB2P47870 512 aa6.66□□□□□ -1.34
SF3B1-206ENST00000462613 SLC11A2P49281 568 aa6.66□□□□□ -1.34
SF3B1-206ENST00000462613 ADKP55263 362 aaKnown RBP6.66□□□□□ -1.34
SF3B1-206ENST00000462613 GSCP56915 257 aaPredicted RBP6.66□□□□□ -1.34
SF3B1-206ENST00000462613 RNASE9P60153 205 aaKnown RBP6.66□□□□□ -1.34
SF3B1-206ENST00000462613 FCHO2Q0JRZ9 810 aa6.66□□□□□ -1.34
SF3B1-206ENST00000462613 USP4Q13107 963 aa6.66□□□□□ -1.34
SF3B1-206ENST00000462613 GRM2Q14416 872 aa6.66□□□□□ -1.34
SF3B1-206ENST00000462613 SPA17Q15506 151 aa6.66□□□□□ -1.34
SF3B1-206ENST00000462613 CCDC122Q5T0U0 273 aa6.66□□□□□ -1.34
SF3B1-206ENST00000462613 MSANTD2Q6P1R3 559 aa6.66□□□□□ -1.34
SF3B1-206ENST00000462613 OLFML1Q6UWY5 402 aa6.66□□□□□ -1.34
SF3B1-206ENST00000462613 VITQ6UXI7 678 aa6.66□□□□□ -1.34
SF3B1-206ENST00000462613 NUDT18Q6ZVK8 323 aa6.66□□□□□ -1.34
SF3B1-206ENST00000462613 ARCQ7LC44 396 aa6.66□□□□□ -1.34
SF3B1-206ENST00000462613 ZNF571Q7Z3V5 609 aaPredicted RBP6.66□□□□□ -1.34
SF3B1-206ENST00000462613 SCD5Q86SK9 330 aa6.66□□□□□ -1.34
SF3B1-206ENST00000462613 XYLT1Q86Y38 959 aa6.66□□□□□ -1.34
SF3B1-206ENST00000462613 TMTC1Q8IUR5 882 aa6.66□□□□□ -1.34
SF3B1-206ENST00000462613 SLC44A3Q8N4M1 653 aa6.66□□□□□ -1.34
SF3B1-206ENST00000462613 WDTC1Q8N5D0 677 aa6.66□□□□□ -1.34
SF3B1-206ENST00000462613 C3orf20Q8ND61 904 aa6.66□□□□□ -1.34
SF3B1-206ENST00000462613 SLC30A5Q8TAD4 765 aa6.66□□□□□ -1.34
SF3B1-206ENST00000462613 FEZF2Q8TBJ5 459 aa6.66□□□□□ -1.34
SF3B1-206ENST00000462613 CLEC4CQ8WTT0 213 aa6.66□□□□□ -1.34
SF3B1-206ENST00000462613 OSCP1Q8WVF1 389 aa6.66□□□□□ -1.34
SF3B1-206ENST00000462613 ZNF653Q96CK0 615 aa6.66□□□□□ -1.34
SF3B1-206ENST00000462613 NECAB3Q96P71 396 aaPredicted RBP6.66□□□□□ -1.34
SF3B1-206ENST00000462613 PANX2Q96RD6 677 aa6.66□□□□□ -1.34
SF3B1-206ENST00000462613 SLC22A12Q96S37 553 aa6.66□□□□□ -1.34
SF3B1-206ENST00000462613 NCAPGQ9BPX3 1015 aa6.66□□□□□ -1.34
SF3B1-206ENST00000462613 RNF38Q9H0F5 515 aa6.66□□□□□ -1.34
SF3B1-206ENST00000462613 MFSD1Q9H3U5 465 aa6.66□□□□□ -1.34
SF3B1-206ENST00000462613 SMOC2Q9H3U7 446 aa6.66□□□□□ -1.34
SF3B1-206ENST00000462613 NMUR1Q9HB89 426 aa6.66□□□□□ -1.34
SF3B1-206ENST00000462613 METTL5Q9NRN9 209 aaKnown RBP6.66□□□□□ -1.34
SF3B1-206ENST00000462613 PARVAQ9NVD7 372 aa6.66□□□□□ -1.34
SF3B1-206ENST00000462613 DUS2Q9NX74 493 aaKnown RBP6.66□□□□□ -1.34
SF3B1-206ENST00000462613 CFAP97Q9P2B7 532 aa6.66□□□□□ -1.34
SF3B1-206ENST00000462613 LCMT1Q9UIC8 334 aa6.66□□□□□ -1.34
SF3B1-206ENST00000462613 MUTYHQ9UIF7 546 aa6.66□□□□□ -1.34
SF3B1-206ENST00000462613 NUDT5Q9UKK9 219 aa6.66□□□□□ -1.34
SF3B1-206ENST00000462613 MRPS17Q9Y2R5 130 aaKnown RBP6.66□□□□□ -1.34
SF3B1-206ENST00000462613 MYO18AQ92614 2054 aaKnown RBP6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms