RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 C12orf65Q9H3J6 166 aaKnown RBP15.78■□□□□ 0.12
SCAMP4-202ENST00000409472 TRABDQ9H4I3 376 aa15.78■□□□□ 0.12
SCAMP4-202ENST00000409472 DCAF8L1A6NGE4 600 aa15.78■□□□□ 0.12
SCAMP4-202ENST00000409472 KRT15P19012 456 aa15.78■□□□□ 0.12
SCAMP4-202ENST00000409472 MLH1P40692 756 aa15.78■□□□□ 0.12
SCAMP4-202ENST00000409472 ELK3P41970 407 aa15.78■□□□□ 0.12
SCAMP4-202ENST00000409472 CDC42EP1Q00587 391 aa15.78■□□□□ 0.12
SCAMP4-202ENST00000409472 TFDP2Q14188 446 aa15.78■□□□□ 0.12
SCAMP4-202ENST00000409472 BOLA3Q53S33 107 aa15.78■□□□□ 0.12
SCAMP4-202ENST00000409472 WSCD1Q658N2 575 aa15.78■□□□□ 0.12
SCAMP4-202ENST00000409472 CXCL17Q6UXB2 119 aa15.78■□□□□ 0.12
SCAMP4-202ENST00000409472 C3orf62Q6ZUJ4 267 aa15.78■□□□□ 0.12
SCAMP4-202ENST00000409472 CCDC121Q6ZUS5 278 aa15.78■□□□□ 0.12
SCAMP4-202ENST00000409472 PAQR9Q6ZVX9 377 aa15.78■□□□□ 0.12
SCAMP4-202ENST00000409472 PCGF5Q86SE9 256 aa15.78■□□□□ 0.12
SCAMP4-202ENST00000409472 PIGZQ86VD9 579 aa15.78■□□□□ 0.12
SCAMP4-202ENST00000409472 FAM131BQ86XD5 332 aa15.78■□□□□ 0.12
SCAMP4-202ENST00000409472 B3GALNT2Q8NCR0 500 aa15.78■□□□□ 0.12
SCAMP4-202ENST00000409472 GSTCDQ8NEC7 633 aa15.78■□□□□ 0.12
SCAMP4-202ENST00000409472 CCDC110Q8TBZ0 833 aa15.78■□□□□ 0.12
SCAMP4-202ENST00000409472 STK32AQ8WU08 396 aa15.78■□□□□ 0.12
SCAMP4-202ENST00000409472 APBA2Q99767 749 aa15.78■□□□□ 0.12
SCAMP4-202ENST00000409472 RAB6BQ9NRW1 208 aa15.78■□□□□ 0.12
SCAMP4-202ENST00000409472 SYNJ2BP-COX16A0A087WUM0 186 aa15.77■□□□□ 0.12
SCAMP4-202ENST00000409472 F5H423 210 aaPredicted RBP15.77■□□□□ 0.12
SCAMP4-202ENST00000409472 TNPO2O14787 897 aaKnown RBP15.77■□□□□ 0.12
SCAMP4-202ENST00000409472 MDM4O15151 490 aa15.77■□□□□ 0.12
SCAMP4-202ENST00000409472 PGK1P00558 417 aa15.77■□□□□ 0.12
SCAMP4-202ENST00000409472 OAS1P00973 400 aaKnown RBP15.77■□□□□ 0.12
SCAMP4-202ENST00000409472 IBSPP21815 317 aaPredicted RBP15.77■□□□□ 0.12
SCAMP4-202ENST00000409472 FAM47CQ5HY64 1035 aa15.77■□□□□ 0.12
SCAMP4-202ENST00000409472 TDRPQ86YL5 185 aa15.77■□□□□ 0.12
SCAMP4-202ENST00000409472 C3orf58Q8NDZ4 430 aa15.77■□□□□ 0.12
SCAMP4-202ENST00000409472 TEKT4Q8WW24 435 aa15.77■□□□□ 0.12
SCAMP4-202ENST00000409472 FAF2Q96CS3 445 aa15.77■□□□□ 0.12
SCAMP4-202ENST00000409472 PPP1R10Q96QC0 940 aaKnown RBP15.77■□□□□ 0.12
SCAMP4-202ENST00000409472 TGS1Q96RS0 853 aaKnown RBP15.77■□□□□ 0.12
SCAMP4-202ENST00000409472 ZIC5Q96T25 663 aa15.77■□□□□ 0.12
SCAMP4-202ENST00000409472 PAFAH2Q99487 392 aa15.77■□□□□ 0.12
SCAMP4-202ENST00000409472 KLF6Q99612 283 aaPredicted RBP15.77■□□□□ 0.12
SCAMP4-202ENST00000409472 PAIP2Q9BPZ3 127 aaKnown RBP15.77■□□□□ 0.12
SCAMP4-202ENST00000409472 NRDE2Q9H7Z3 1164 aa15.77■□□□□ 0.12
SCAMP4-202ENST00000409472 ABCF3Q9NUQ8 709 aa15.77■□□□□ 0.12
SCAMP4-202ENST00000409472 TMEM30AQ9NV96 361 aa15.77■□□□□ 0.12
SCAMP4-202ENST00000409472 COX16Q9P0S2 106 aa15.77■□□□□ 0.12
SCAMP4-202ENST00000409472 CPSF2Q9P2I0 782 aaKnown RBP15.77■□□□□ 0.12
SCAMP4-202ENST00000409472 AP4E1Q9UPM8 1137 aa15.77■□□□□ 0.12
SCAMP4-202ENST00000409472 TIMM13Q9Y5L4 95 aaPredicted RBP15.77■□□□□ 0.12
SCAMP4-202ENST00000409472 CDY2AQ9Y6F7 541 aa15.77■□□□□ 0.12
SCAMP4-202ENST00000409472 KBTBD13C9JR72 458 aa15.77■□□□□ 0.11
SCAMP4-202ENST00000409472 SNX3O60493 162 aa15.77■□□□□ 0.11
SCAMP4-202ENST00000409472 STX2P32856 288 aa15.77■□□□□ 0.11
SCAMP4-202ENST00000409472 RPA3P35244 121 aaPredicted RBP15.77■□□□□ 0.11
SCAMP4-202ENST00000409472 RGS2P41220 211 aa15.77■□□□□ 0.11
SCAMP4-202ENST00000409472 PTPN9P43378 593 aa15.77■□□□□ 0.11
SCAMP4-202ENST00000409472 RNASELQ05823 741 aaKnown RBP15.77■□□□□ 0.11
SCAMP4-202ENST00000409472 CRHR2Q13324 411 aa15.77■□□□□ 0.11
SCAMP4-202ENST00000409472 PDK2Q15119 407 aa15.77■□□□□ 0.11
SCAMP4-202ENST00000409472 PCBP1Q15365 356 aaKnown RBP eCLIP15.77■□□□□ 0.114e-8■■■■■ 36.4
SCAMP4-202ENST00000409472 CEP128Q6ZU80 1094 aa15.77■□□□□ 0.11
SCAMP4-202ENST00000409472 HFE2Q6ZVN8 426 aa15.77■□□□□ 0.11
SCAMP4-202ENST00000409472 ATP11CQ8NB49 1132 aa15.77■□□□□ 0.11
SCAMP4-202ENST00000409472 CENPIQ92674 756 aaPredicted RBP15.77■□□□□ 0.11
SCAMP4-202ENST00000409472 PAAF1Q9BRP4 392 aa15.77■□□□□ 0.11
SCAMP4-202ENST00000409472 SCN10AQ9Y5Y9 1956 aa15.77■□□□□ 0.11
SCAMP4-202ENST00000409472 FAM47DPA6NHR8 397 aa15.76■□□□□ 0.11
SCAMP4-202ENST00000409472 HUS1O60921 280 aa15.76■□□□□ 0.11
SCAMP4-202ENST00000409472 GOT1P17174 413 aa15.76■□□□□ 0.11
SCAMP4-202ENST00000409472 RPL34P49207 117 aaKnown RBP15.76■□□□□ 0.11
SCAMP4-202ENST00000409472 TRIM32Q13049 653 aa15.76■□□□□ 0.11
SCAMP4-202ENST00000409472 DPYSL2Q16555 572 aa15.76■□□□□ 0.11
SCAMP4-202ENST00000409472 SV2CQ496J9 727 aa15.76■□□□□ 0.11
SCAMP4-202ENST00000409472 GDF6Q6KF10 455 aaPredicted RBP15.76■□□□□ 0.11
SCAMP4-202ENST00000409472 FAM47EQ6ZV65 393 aa15.76■□□□□ 0.11
SCAMP4-202ENST00000409472 IFNL1Q8IU54 200 aa15.76■□□□□ 0.11
SCAMP4-202ENST00000409472 DEFB106AQ8N104 65 aa15.76■□□□□ 0.11
SCAMP4-202ENST00000409472 RIBC1Q8N443 379 aaPredicted RBP15.76■□□□□ 0.11
SCAMP4-202ENST00000409472 FAM149B1Q96BN6 582 aa15.76■□□□□ 0.11
SCAMP4-202ENST00000409472 ZNF670Q9BS34 389 aa15.76■□□□□ 0.11
SCAMP4-202ENST00000409472 ACSS3Q9H6R3 686 aa15.76■□□□□ 0.11
SCAMP4-202ENST00000409472 PLAC1Q9HBJ0 212 aa15.76■□□□□ 0.11
SCAMP4-202ENST00000409472 MIOSQ9NXC5 875 aa15.76■□□□□ 0.11
SCAMP4-202ENST00000409472 SAMD15Q9P1V8 674 aa15.76■□□□□ 0.11
SCAMP4-202ENST00000409472 PSMC3IPQ9P2W1 217 aaPredicted RBP15.76■□□□□ 0.11
SCAMP4-202ENST00000409472 GOLGA8RI6L899 631 aa15.76■□□□□ 0.11
SCAMP4-202ENST00000409472 ZBED1O96006 694 aa15.76■□□□□ 0.11
SCAMP4-202ENST00000409472 AMHP03971 560 aa15.76■□□□□ 0.11
SCAMP4-202ENST00000409472 CACNA2D1P54289 1103 aa15.76■□□□□ 0.11
SCAMP4-202ENST00000409472 SLC1A5Q15758 541 aa15.76■□□□□ 0.11
SCAMP4-202ENST00000409472 MDH1BQ5I0G3 518 aa15.76■□□□□ 0.11
SCAMP4-202ENST00000409472 MAP7D3Q8IWC1 876 aa15.76■□□□□ 0.11
SCAMP4-202ENST00000409472 PDIK1LQ8N165 341 aa15.76■□□□□ 0.11
SCAMP4-202ENST00000409472 RNF169Q8NCN4 708 aa15.76■□□□□ 0.11
SCAMP4-202ENST00000409472 DENND1AQ8TEH3 1009 aa15.76■□□□□ 0.11
SCAMP4-202ENST00000409472 MZB1Q8WU39 189 aa15.76■□□□□ 0.11
SCAMP4-202ENST00000409472 THOC1Q96FV9 657 aaKnown RBP15.76■□□□□ 0.11
SCAMP4-202ENST00000409472 CSPG4P5Q96PW8 444 aa15.76■□□□□ 0.11
SCAMP4-202ENST00000409472 GAD1Q99259 594 aa15.76■□□□□ 0.11
SCAMP4-202ENST00000409472 NKIRAS1Q9NYS0 192 aa15.76■□□□□ 0.11
SCAMP4-202ENST00000409472 ACTL7BQ9Y614 415 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 1181.3 ms