RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 GRIK4Q16099 956 aa13.88□□□□□ -0.19
COL6A2-204ENST00000409416 CAPRIN2Q6IMN6 1127 aaKnown RBP13.88□□□□□ -0.19
COL6A2-204ENST00000409416 TLDC1Q6P9B6 456 aa13.88□□□□□ -0.19
COL6A2-204ENST00000409416 ASRGL1Q7L266 308 aa13.88□□□□□ -0.19
COL6A2-204ENST00000409416 TTC7BQ86TV6 843 aa13.88□□□□□ -0.19
COL6A2-204ENST00000409416 PDCD7Q8N8D1 485 aaKnown RBP13.88□□□□□ -0.19
COL6A2-204ENST00000409416 SLC7A14Q8TBB6 771 aa13.88□□□□□ -0.19
COL6A2-204ENST00000409416 FAM167AQ96KS9 214 aa13.88□□□□□ -0.19
COL6A2-204ENST00000409416 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.88□□□□□ -0.19
COL6A2-204ENST00000409416 SENP1Q9P0U3 644 aa13.88□□□□□ -0.19
COL6A2-204ENST00000409416 KLHL8Q9P2G9 620 aaPredicted RBP13.88□□□□□ -0.19
COL6A2-204ENST00000409416 CNTNAP2Q9UHC6 1331 aa13.88□□□□□ -0.19
COL6A2-204ENST00000409416 RECQL4O94761 1208 aa13.88□□□□□ -0.19
COL6A2-204ENST00000409416 KDELR1P24390 212 aa13.88□□□□□ -0.19
COL6A2-204ENST00000409416 AVPR1AP37288 418 aa13.88□□□□□ -0.19
COL6A2-204ENST00000409416 RFC5P40937 340 aa13.88□□□□□ -0.19
COL6A2-204ENST00000409416 GLRBP48167 497 aa13.88□□□□□ -0.19
COL6A2-204ENST00000409416 MCL1Q07820 350 aa13.88□□□□□ -0.19
COL6A2-204ENST00000409416 OASLQ15646 514 aaKnown RBP13.88□□□□□ -0.19
COL6A2-204ENST00000409416 KLHL38Q2WGJ6 581 aa13.88□□□□□ -0.19
COL6A2-204ENST00000409416 SLC10A6Q3KNW5 377 aa13.88□□□□□ -0.19
COL6A2-204ENST00000409416 PCGF5Q86SE9 256 aa13.88□□□□□ -0.19
COL6A2-204ENST00000409416 KHSRPQ92945 711 aaKnown RBP eCLIP13.88□□□□□ -0.19
COL6A2-204ENST00000409416 ZWINTO95229 277 aa13.87□□□□□ -0.19
COL6A2-204ENST00000409416 HOXC6P09630 235 aa13.87□□□□□ -0.19
COL6A2-204ENST00000409416 MLH1P40692 756 aa13.87□□□□□ -0.19
COL6A2-204ENST00000409416 SULT1E1P49888 294 aa13.87□□□□□ -0.19
COL6A2-204ENST00000409416 ZNF280AP59817 542 aaPredicted RBP13.87□□□□□ -0.19
COL6A2-204ENST00000409416 CCL14Q16627 93 aa13.87□□□□□ -0.19
COL6A2-204ENST00000409416 RAPH1Q70E73 1250 aa13.87□□□□□ -0.19
COL6A2-204ENST00000409416 IGDCC3Q8IVU1 814 aa13.87□□□□□ -0.19
COL6A2-204ENST00000409416 ARID3BQ8IVW6 561 aaPredicted RBP13.87□□□□□ -0.19
COL6A2-204ENST00000409416 C10orf82Q8WW14 230 aa13.87□□□□□ -0.19
COL6A2-204ENST00000409416 NAF1Q96HR8 494 aaKnown RBP13.87□□□□□ -0.19
COL6A2-204ENST00000409416 TMEM120AQ9BXJ8 343 aa13.87□□□□□ -0.19
COL6A2-204ENST00000409416 FOXP3Q9BZS1 431 aa13.87□□□□□ -0.19
COL6A2-204ENST00000409416 DENND2DQ9H6A0 471 aaPredicted RBP13.87□□□□□ -0.19
COL6A2-204ENST00000409416 ARL8BQ9NVJ2 186 aa13.87□□□□□ -0.19
COL6A2-204ENST00000409416 MCM3APO60318 1980 aa13.87□□□□□ -0.19
COL6A2-204ENST00000409416 TSPAN3O60637 253 aa13.87□□□□□ -0.19
COL6A2-204ENST00000409416 CCNHP51946 323 aaPredicted RBP13.87□□□□□ -0.19
COL6A2-204ENST00000409416 ADIGQ0VDE8 80 aa13.87□□□□□ -0.19
COL6A2-204ENST00000409416 PCSK7Q16549 785 aa13.87□□□□□ -0.19
COL6A2-204ENST00000409416 PLEKHG4Q58EX7 1191 aa13.87□□□□□ -0.19
COL6A2-204ENST00000409416 MAP7D3Q8IWC1 876 aa13.87□□□□□ -0.19
COL6A2-204ENST00000409416 GPC2Q8N158 579 aa13.87□□□□□ -0.19
COL6A2-204ENST00000409416 RYBPQ8N488 228 aaPredicted RBP13.87□□□□□ -0.19
COL6A2-204ENST00000409416 POU5F2Q8N7G0 328 aa13.87□□□□□ -0.19
COL6A2-204ENST00000409416 RNPEPL1Q9HAU8 725 aa13.87□□□□□ -0.19
COL6A2-204ENST00000409416 ADARB2Q9NS39 739 aaKnown RBP13.87□□□□□ -0.19
COL6A2-204ENST00000409416 MAP3K20Q9NYL2 800 aaKnown RBP13.87□□□□□ -0.19
COL6A2-204ENST00000409416 FAM237BA0A1B0GVD1 139 aa13.87□□□□□ -0.19
COL6A2-204ENST00000409416 PRPF4O43172 522 aaKnown RBP eCLIP13.87□□□□□ -0.19
COL6A2-204ENST00000409416 ZMPSTE24O75844 475 aa13.87□□□□□ -0.19
COL6A2-204ENST00000409416 ATP5HO75947 161 aa13.87□□□□□ -0.19
COL6A2-204ENST00000409416 ITGAVP06756 1048 aa13.87□□□□□ -0.19
COL6A2-204ENST00000409416 RCN1Q15293 331 aa13.87□□□□□ -0.19
COL6A2-204ENST00000409416 HEATR6Q6AI08 1181 aaKnown RBP13.87□□□□□ -0.19
COL6A2-204ENST00000409416 NDUFAF2Q8N183 169 aa13.87□□□□□ -0.19
COL6A2-204ENST00000409416 DENND1AQ8TEH3 1009 aa13.87□□□□□ -0.19
COL6A2-204ENST00000409416 SCYL1Q96KG9 808 aa13.87□□□□□ -0.19
COL6A2-204ENST00000409416 PDLIM7Q9NR12 457 aa13.87□□□□□ -0.19
COL6A2-204ENST00000409416 SLC24A2Q9UI40 661 aa13.87□□□□□ -0.19
COL6A2-204ENST00000409416 SIX4Q9UIU6 781 aa13.87□□□□□ -0.19
COL6A2-204ENST00000409416 ZNFX1Q9P2E3 1918 aaKnown RBP13.86□□□□□ -0.19
COL6A2-204ENST00000409416 IQANK1A0A1B0GTG1 560 aa13.86□□□□□ -0.19
COL6A2-204ENST00000409416 M0QYT0 321 aa13.86□□□□□ -0.19
COL6A2-204ENST00000409416 HUS1O60921 280 aa13.86□□□□□ -0.19
COL6A2-204ENST00000409416 MYL2P10916 166 aa13.86□□□□□ -0.19
COL6A2-204ENST00000409416 GM2AP17900 193 aa13.86□□□□□ -0.19
COL6A2-204ENST00000409416 KCNA4P22459 653 aa13.86□□□□□ -0.19
COL6A2-204ENST00000409416 GNL1P36915 607 aaPredicted RBP13.86□□□□□ -0.19
COL6A2-204ENST00000409416 RBP5P82980 135 aa13.86□□□□□ -0.19
COL6A2-204ENST00000409416 MOGSQ13724 837 aa13.86□□□□□ -0.19
COL6A2-204ENST00000409416 GNASQ5JWF2 1037 aa13.86□□□□□ -0.19
COL6A2-204ENST00000409416 CXCL17Q6UXB2 119 aa13.86□□□□□ -0.19
COL6A2-204ENST00000409416 CLNKQ7Z7G1 428 aa13.86□□□□□ -0.19
COL6A2-204ENST00000409416 PRPF39Q86UA1 669 aaKnown RBP13.86□□□□□ -0.19
COL6A2-204ENST00000409416 RIOX2Q8IUF8 465 aa13.86□□□□□ -0.19
COL6A2-204ENST00000409416 SLC4A11Q8NBS3 891 aa13.86□□□□□ -0.19
COL6A2-204ENST00000409416 CFAP61Q8NHU2 1237 aa13.86□□□□□ -0.19
COL6A2-204ENST00000409416 SERAC1Q96JX3 654 aa13.86□□□□□ -0.19
COL6A2-204ENST00000409416 LRMDAQ9H2I8 198 aa13.86□□□□□ -0.19
COL6A2-204ENST00000409416 PRG3Q9Y2Y8 225 aaPredicted RBP13.86□□□□□ -0.19
COL6A2-204ENST00000409416 MEI4A8MW99 385 aa13.86□□□□□ -0.19
COL6A2-204ENST00000409416 DGKIO75912 1065 aa13.86□□□□□ -0.19
COL6A2-204ENST00000409416 CCNB1P14635 433 aa13.86□□□□□ -0.19
COL6A2-204ENST00000409416 GOT1P17174 413 aa13.86□□□□□ -0.19
COL6A2-204ENST00000409416 ARL4AP40617 200 aa13.86□□□□□ -0.19
COL6A2-204ENST00000409416 PEX6Q13608 980 aa13.86□□□□□ -0.19
COL6A2-204ENST00000409416 TSNAXIP1Q2TAA8 658 aa13.86□□□□□ -0.19
COL6A2-204ENST00000409416 LMNTD2Q8IXW0 634 aa13.86□□□□□ -0.19
COL6A2-204ENST00000409416 SLC16A10Q8TF71 515 aa13.86□□□□□ -0.19
COL6A2-204ENST00000409416 C2orf40Q9H1Z8 148 aa13.86□□□□□ -0.19
COL6A2-204ENST00000409416 STRIP2Q9ULQ0 834 aa13.86□□□□□ -0.19
COL6A2-204ENST00000409416 DFFAO00273 331 aa13.86□□□□□ -0.19
COL6A2-204ENST00000409416 APOL1O14791 398 aa13.86□□□□□ -0.19
COL6A2-204ENST00000409416 CFLARO15519 480 aa13.86□□□□□ -0.19
COL6A2-204ENST00000409416 CALB2P22676 271 aa13.86□□□□□ -0.19
COL6A2-204ENST00000409416 ASPAP45381 313 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms