RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 YBX3P16989 372 aaKnown RBP eCLIP17.48■□□□□ 0.39
NUP50-203ENST00000407019 NEK3P51956 506 aa17.48■□□□□ 0.39
NUP50-203ENST00000407019 SLC18A2Q05940 514 aa17.48■□□□□ 0.39
NUP50-203ENST00000407019 PREPLQ4J6C6 727 aaPredicted RBP17.48■□□□□ 0.39
NUP50-203ENST00000407019 SLC26A11Q86WA9 606 aa17.48■□□□□ 0.39
NUP50-203ENST00000407019 CEP57Q86XR8 500 aa17.48■□□□□ 0.39
NUP50-203ENST00000407019 ZNF276Q8N554 614 aa17.48■□□□□ 0.39
NUP50-203ENST00000407019 KBTBD7Q8WVZ9 684 aa17.48■□□□□ 0.39
NUP50-203ENST00000407019 CENPIQ92674 756 aaPredicted RBP17.48■□□□□ 0.39
NUP50-203ENST00000407019 ZNF560Q96MR9 790 aa17.48■□□□□ 0.39
NUP50-203ENST00000407019 C12orf65Q9H3J6 166 aaKnown RBP17.48■□□□□ 0.39
NUP50-203ENST00000407019 ZC3H7BQ9UGR2 993 aaKnown RBP17.48■□□□□ 0.39
NUP50-203ENST00000407019 GJD2Q9UKL4 321 aa17.48■□□□□ 0.39
NUP50-203ENST00000407019 AP4E1Q9UPM8 1137 aa17.48■□□□□ 0.39
NUP50-203ENST00000407019 SMIM35A0A1B0GVV1 85 aa17.47■□□□□ 0.39
NUP50-203ENST00000407019 UNCXA6NJT0 531 aa17.47■□□□□ 0.39
NUP50-203ENST00000407019 ECM2O94769 699 aaPredicted RBP17.47■□□□□ 0.39
NUP50-203ENST00000407019 PDGFRBP09619 1106 aa17.47■□□□□ 0.39
NUP50-203ENST00000407019 CYP2C9P11712 490 aa17.47■□□□□ 0.39
NUP50-203ENST00000407019 AKAP5P24588 427 aa17.47■□□□□ 0.39
NUP50-203ENST00000407019 SLC45A4Q5BKX6 768 aa17.47■□□□□ 0.39
NUP50-203ENST00000407019 PLEKHH3Q7Z736 793 aa17.47■□□□□ 0.39
NUP50-203ENST00000407019 PRPF39Q86UA1 669 aaKnown RBP17.47■□□□□ 0.39
NUP50-203ENST00000407019 CAND1Q86VP6 1230 aaKnown RBP17.47■□□□□ 0.39
NUP50-203ENST00000407019 CRYBG2Q8N1P7 616 aa17.47■□□□□ 0.39
NUP50-203ENST00000407019 MCUQ8NE86 351 aa17.47■□□□□ 0.39
NUP50-203ENST00000407019 ZNF398Q8TD17 642 aa17.47■□□□□ 0.39
NUP50-203ENST00000407019 LRRC39Q96DD0 335 aa17.47■□□□□ 0.39
NUP50-203ENST00000407019 DNAI2Q9GZS0 605 aa17.47■□□□□ 0.39
NUP50-203ENST00000407019 SNX25Q9H3E2 840 aa17.47■□□□□ 0.39
NUP50-203ENST00000407019 MANSC1Q9H8J5 431 aa17.47■□□□□ 0.39
NUP50-203ENST00000407019 RNF19AQ9NV58 838 aa17.47■□□□□ 0.39
NUP50-203ENST00000407019 KPNA7A9QM74 516 aa17.46■□□□□ 0.39
NUP50-203ENST00000407019 PIRO00625 290 aa17.46■□□□□ 0.39
NUP50-203ENST00000407019 TOMM70O94826 608 aa17.46■□□□□ 0.39
NUP50-203ENST00000407019 C1QAP02745 245 aa17.46■□□□□ 0.39
NUP50-203ENST00000407019 AXLP30530 894 aa17.46■□□□□ 0.39
NUP50-203ENST00000407019 GNL1P36915 607 aaPredicted RBP17.46■□□□□ 0.39
NUP50-203ENST00000407019 ACADSBP45954 432 aa17.46■□□□□ 0.39
NUP50-203ENST00000407019 RPL34P49207 117 aaKnown RBP17.46■□□□□ 0.39
NUP50-203ENST00000407019 ATXN1P54253 815 aaKnown RBP17.46■□□□□ 0.39
NUP50-203ENST00000407019 GBE1Q04446 702 aa17.46■□□□□ 0.39
NUP50-203ENST00000407019 WLSQ5T9L3 541 aa17.46■□□□□ 0.39
NUP50-203ENST00000407019 TTC39BQ5VTQ0 682 aaPredicted RBP17.46■□□□□ 0.39
NUP50-203ENST00000407019 CTAGE3PQ8IX95 158 aa17.46■□□□□ 0.39
NUP50-203ENST00000407019 VPS52Q8N1B4 723 aa17.46■□□□□ 0.39
NUP50-203ENST00000407019 PPM1NQ8N819 430 aa17.46■□□□□ 0.39
NUP50-203ENST00000407019 NPLOC4Q8TAT6 608 aa17.46■□□□□ 0.39
NUP50-203ENST00000407019 LRRN4Q8WUT4 740 aa17.46■□□□□ 0.39
NUP50-203ENST00000407019 NPHS2Q9NP85 383 aa17.46■□□□□ 0.39
NUP50-203ENST00000407019 TRIP11Q15643 1979 aa17.46■□□□□ 0.39
NUP50-203ENST00000407019 KAT6AQ92794 2004 aa17.46■□□□□ 0.39
NUP50-203ENST00000407019 MBLAC1A4D2B0 266 aaPredicted RBP17.46■□□□□ 0.39
NUP50-203ENST00000407019 DCAF8L1A6NGE4 600 aa17.46■□□□□ 0.39
NUP50-203ENST00000407019 TRDMT1O14717 391 aaKnown RBP17.46■□□□□ 0.39
NUP50-203ENST00000407019 DYNC1LI2O43237 492 aaPredicted RBP17.46■□□□□ 0.39
NUP50-203ENST00000407019 XPOTO43592 962 aaKnown RBP17.46■□□□□ 0.39
NUP50-203ENST00000407019 GCATO75600 419 aa17.46■□□□□ 0.39
NUP50-203ENST00000407019 F2P00734 622 aa17.46■□□□□ 0.39
NUP50-203ENST00000407019 GSTA2P09210 222 aa17.46■□□□□ 0.39
NUP50-203ENST00000407019 DHRS4L1P0CG22 281 aa17.46■□□□□ 0.39
NUP50-203ENST00000407019 PYGBP11216 843 aa17.46■□□□□ 0.39
NUP50-203ENST00000407019 PNPLA4P41247 253 aa17.46■□□□□ 0.39
NUP50-203ENST00000407019 NR2C2P49116 596 aa17.46■□□□□ 0.39
NUP50-203ENST00000407019 SH2D5Q6ZV89 423 aa17.46■□□□□ 0.39
NUP50-203ENST00000407019 CHSY1Q86X52 802 aa17.46■□□□□ 0.39
NUP50-203ENST00000407019 PPP1R13LQ8WUF5 828 aa17.46■□□□□ 0.39
NUP50-203ENST00000407019 QKIQ96PU8 341 aaKnown RBP eCLIP17.46■□□□□ 0.39
NUP50-203ENST00000407019 RAB3IPQ96QF0 476 aaPredicted RBP17.46■□□□□ 0.39
NUP50-203ENST00000407019 KCTD15Q96SI1 283 aaPredicted RBP17.46■□□□□ 0.39
NUP50-203ENST00000407019 GDAP2Q9NXN4 497 aa17.46■□□□□ 0.39
NUP50-203ENST00000407019 ZNF180Q9UJW8 692 aa17.46■□□□□ 0.39
NUP50-203ENST00000407019 PIN4Q9Y237 131 aaKnown RBP17.46■□□□□ 0.39
NUP50-203ENST00000407019 STK38LQ9Y2H1 464 aa17.46■□□□□ 0.39
NUP50-203ENST00000407019 SMIM28A0A1B0GU29 152 aa17.45■□□□□ 0.38
NUP50-203ENST00000407019 C2CD2LO14523 706 aa17.45■□□□□ 0.38
NUP50-203ENST00000407019 PRKCHP24723 683 aa17.45■□□□□ 0.38
NUP50-203ENST00000407019 LMO2P25791 158 aa17.45■□□□□ 0.38
NUP50-203ENST00000407019 ETV4P43268 484 aa17.45■□□□□ 0.38
NUP50-203ENST00000407019 NLRP9Q7RTR0 991 aa17.45■□□□□ 0.38
NUP50-203ENST00000407019 LRRC6Q86X45 466 aa17.45■□□□□ 0.38
NUP50-203ENST00000407019 HSFY1Q96LI6 401 aa17.45■□□□□ 0.38
NUP50-203ENST00000407019 CSPG4P5Q96PW8 444 aa17.45■□□□□ 0.38
NUP50-203ENST00000407019 MTMR10Q9NXD2 777 aa17.45■□□□□ 0.38
NUP50-203ENST00000407019 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.45■□□□□ 0.38
NUP50-203ENST00000407019 KLK14Q9P0G3 267 aa17.45■□□□□ 0.38
NUP50-203ENST00000407019 SPTLC1O15269 473 aa17.44■□□□□ 0.38
NUP50-203ENST00000407019 KRT37O76014 449 aa17.44■□□□□ 0.38
NUP50-203ENST00000407019 METTL18O95568 372 aa17.44■□□□□ 0.38
NUP50-203ENST00000407019 EZRP15311 586 aaKnown RBP17.44■□□□□ 0.38
NUP50-203ENST00000407019 TPSB2P20231 275 aa17.44■□□□□ 0.38
NUP50-203ENST00000407019 SLC10A2Q12908 348 aaPredicted RBP17.44■□□□□ 0.38
NUP50-203ENST00000407019 E2F5Q15329 346 aa17.44■□□□□ 0.38
NUP50-203ENST00000407019 TPSAB1Q15661 275 aa17.44■□□□□ 0.38
NUP50-203ENST00000407019 SPDYAQ5MJ70 313 aa17.44■□□□□ 0.38
NUP50-203ENST00000407019 STRADAQ7RTN6 431 aa17.44■□□□□ 0.38
NUP50-203ENST00000407019 CCDC185Q8N715 623 aa17.44■□□□□ 0.38
NUP50-203ENST00000407019 APPL2Q8NEU8 664 aa17.44■□□□□ 0.38
NUP50-203ENST00000407019 SLC2A14Q8TDB8 520 aa17.44■□□□□ 0.38
NUP50-203ENST00000407019 FAM111AQ96PZ2 611 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms