RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 WDR60Q8WVS4 1066 aa13.13□□□□□ -0.31
PPP4R1-202ENST00000400555 MIPEPQ99797 713 aa13.13□□□□□ -0.31
PPP4R1-202ENST00000400555 CPSF2Q9P2I0 782 aaKnown RBP13.13□□□□□ -0.31
PPP4R1-202ENST00000400555 WASF2Q9Y6W5 498 aa13.13□□□□□ -0.31
PPP4R1-202ENST00000400555 FOCADQ5VW36 1801 aa13.13□□□□□ -0.31
PPP4R1-202ENST00000400555 NEMP1O14524 444 aa13.13□□□□□ -0.31
PPP4R1-202ENST00000400555 USP1O94782 785 aa13.13□□□□□ -0.31
PPP4R1-202ENST00000400555 TPBGLP0DKB5 382 aa13.13□□□□□ -0.31
PPP4R1-202ENST00000400555 VDRP11473 427 aa13.13□□□□□ -0.31
PPP4R1-202ENST00000400555 ARL4AP40617 200 aa13.13□□□□□ -0.31
PPP4R1-202ENST00000400555 ZNF143P52747 638 aaPredicted RBP13.13□□□□□ -0.31
PPP4R1-202ENST00000400555 YWHAZP63104 245 aaKnown RBP13.13□□□□□ -0.31
PPP4R1-202ENST00000400555 TTLL4Q14679 1199 aa13.13□□□□□ -0.31
PPP4R1-202ENST00000400555 SLC10A6Q3KNW5 377 aa13.13□□□□□ -0.31
PPP4R1-202ENST00000400555 FBXO27Q8NI29 283 aa13.13□□□□□ -0.31
PPP4R1-202ENST00000400555 MOCOSQ96EN8 888 aa13.13□□□□□ -0.31
PPP4R1-202ENST00000400555 IFT122Q9HBG6 1241 aa13.13□□□□□ -0.31
PPP4R1-202ENST00000400555 GOLGA2P5Q9HBQ8 144 aa13.13□□□□□ -0.31
PPP4R1-202ENST00000400555 ETNK2Q9NVF9 386 aa13.13□□□□□ -0.31
PPP4R1-202ENST00000400555 FARP1Q9Y4F1 1045 aaPredicted RBP13.13□□□□□ -0.31
PPP4R1-202ENST00000400555 CEP350Q5VT06 3117 aa13.12□□□□□ -0.31
PPP4R1-202ENST00000400555 SPECC1L-ADORA2AF8WAN1 911 aa13.12□□□□□ -0.31
PPP4R1-202ENST00000400555 CFLARO15519 480 aa13.12□□□□□ -0.31
PPP4R1-202ENST00000400555 LGR5O75473 907 aa13.12□□□□□ -0.31
PPP4R1-202ENST00000400555 PDE5AO76074 875 aa13.12□□□□□ -0.31
PPP4R1-202ENST00000400555 CSH1P0DML2 217 aa13.12□□□□□ -0.31
PPP4R1-202ENST00000400555 CSH2P0DML3 217 aa13.12□□□□□ -0.31
PPP4R1-202ENST00000400555 TYK2P29597 1187 aa13.12□□□□□ -0.31
PPP4R1-202ENST00000400555 GPD2P43304 727 aa13.12□□□□□ -0.31
PPP4R1-202ENST00000400555 PGGT1BP53609 377 aa13.12□□□□□ -0.31
PPP4R1-202ENST00000400555 NXNQ6DKJ4 435 aa13.12□□□□□ -0.31
PPP4R1-202ENST00000400555 LBX2Q6XYB7 198 aa13.12□□□□□ -0.31
PPP4R1-202ENST00000400555 PCDH19Q8TAB3 1148 aa13.12□□□□□ -0.31
PPP4R1-202ENST00000400555 RNF34Q969K3 372 aa13.12□□□□□ -0.31
PPP4R1-202ENST00000400555 ALKBH8Q96BT7 664 aaKnown RBP13.12□□□□□ -0.31
PPP4R1-202ENST00000400555 ZBED3Q96IU2 234 aaPredicted RBP13.12□□□□□ -0.31
PPP4R1-202ENST00000400555 DPEP3Q9H4B8 488 aa13.12□□□□□ -0.31
PPP4R1-202ENST00000400555 CACNG4Q9UBN1 327 aa13.12□□□□□ -0.31
PPP4R1-202ENST00000400555 COL4A5P29400 1685 aa13.12□□□□□ -0.31
PPP4R1-202ENST00000400555 CDK16Q00536 496 aa13.12□□□□□ -0.31
PPP4R1-202ENST00000400555 MAP3K10Q02779 954 aa13.12□□□□□ -0.31
PPP4R1-202ENST00000400555 PPM1JQ5JR12 505 aa13.12□□□□□ -0.31
PPP4R1-202ENST00000400555 CELF3Q5SZQ8 465 aaKnown RBP13.12□□□□□ -0.31
PPP4R1-202ENST00000400555 ATG16L1Q676U5 607 aa13.12□□□□□ -0.31
PPP4R1-202ENST00000400555 PAXIP1Q6ZW49 1069 aaPredicted RBP13.12□□□□□ -0.31
PPP4R1-202ENST00000400555 MAGEC3Q8TD91 643 aa13.12□□□□□ -0.31
PPP4R1-202ENST00000400555 SLC26A7Q8TE54 656 aa13.12□□□□□ -0.31
PPP4R1-202ENST00000400555 EBF4Q9BQW3 602 aa13.12□□□□□ -0.31
PPP4R1-202ENST00000400555 MAN1C1Q9NR34 630 aa13.12□□□□□ -0.31
PPP4R1-202ENST00000400555 SETD4Q9NVD3 440 aa13.12□□□□□ -0.31
PPP4R1-202ENST00000400555 TAS2R1Q9NYW7 299 aa13.12□□□□□ -0.31
PPP4R1-202ENST00000400555 BARX2Q9UMQ3 279 aaPredicted RBP13.12□□□□□ -0.31
PPP4R1-202ENST00000400555 DNAJC16Q9Y2G8 782 aa13.12□□□□□ -0.31
PPP4R1-202ENST00000400555 MTO1Q9Y2Z2 717 aaKnown RBP13.12□□□□□ -0.31
PPP4R1-202ENST00000400555 GREB1LQ9C091 1923 aaPredicted RBP13.12□□□□□ -0.31
PPP4R1-202ENST00000400555 COL11A2P13942 1736 aaPredicted RBP13.12□□□□□ -0.31
PPP4R1-202ENST00000400555 TM9SF1O15321 606 aa13.12□□□□□ -0.31
PPP4R1-202ENST00000400555 GSC2O15499 205 aa13.12□□□□□ -0.31
PPP4R1-202ENST00000400555 HBP1O60381 514 aa13.12□□□□□ -0.31
PPP4R1-202ENST00000400555 CILPO75339 1184 aa13.12□□□□□ -0.31
PPP4R1-202ENST00000400555 CCNB1P14635 433 aa13.12□□□□□ -0.31
PPP4R1-202ENST00000400555 SLC25A3Q00325 362 aa13.12□□□□□ -0.31
PPP4R1-202ENST00000400555 TARBP2Q15633 366 aaKnown RBP13.12□□□□□ -0.31
PPP4R1-202ENST00000400555 PPP4R1Q8TF05 950 aa13.12□□□□□ -0.31
PPP4R1-202ENST00000400555 SCG3Q8WXD2 468 aaKnown RBP13.12□□□□□ -0.31
PPP4R1-202ENST00000400555 CAMKK2Q96RR4 588 aa13.12□□□□□ -0.31
PPP4R1-202ENST00000400555 SLC5A4Q9NY91 659 aa13.12□□□□□ -0.31
PPP4R1-202ENST00000400555 ERAP1Q9NZ08 941 aa13.12□□□□□ -0.31
PPP4R1-202ENST00000400555 C3orf70A6NLC5 250 aaPredicted RBP13.11□□□□□ -0.31
PPP4R1-202ENST00000400555 USP2O75604 605 aaPredicted RBP13.11□□□□□ -0.31
PPP4R1-202ENST00000400555 ERVK-10P10266 1014 aa13.11□□□□□ -0.31
PPP4R1-202ENST00000400555 MGAT1P26572 445 aa13.11□□□□□ -0.31
PPP4R1-202ENST00000400555 ADCYAP1R1P41586 468 aa13.11□□□□□ -0.31
PPP4R1-202ENST00000400555 ACVR2BQ13705 512 aa13.11□□□□□ -0.31
PPP4R1-202ENST00000400555 R3HDM1Q15032 1099 aaKnown RBP13.11□□□□□ -0.31
PPP4R1-202ENST00000400555 ACSBG2Q5FVE4 666 aa13.11□□□□□ -0.31
PPP4R1-202ENST00000400555 VWA5B1Q5TIE3 1220 aa13.11□□□□□ -0.31
PPP4R1-202ENST00000400555 UNC5AQ6ZN44 842 aa13.11□□□□□ -0.31
PPP4R1-202ENST00000400555 TDRPQ86YL5 185 aa13.11□□□□□ -0.31
PPP4R1-202ENST00000400555 TNS4Q8IZW8 715 aa13.11□□□□□ -0.31
PPP4R1-202ENST00000400555 USP33Q8TEY7 942 aa13.11□□□□□ -0.31
PPP4R1-202ENST00000400555 UCMAQ8WVF2 138 aa13.11□□□□□ -0.31
PPP4R1-202ENST00000400555 SLC44A1Q8WWI5 657 aa13.11□□□□□ -0.31
PPP4R1-202ENST00000400555 SNX25Q9H3E2 840 aa13.11□□□□□ -0.31
PPP4R1-202ENST00000400555 PCDH18Q9HCL0 1135 aa13.11□□□□□ -0.31
PPP4R1-202ENST00000400555 PRMT7Q9NVM4 692 aaPredicted RBP13.11□□□□□ -0.31
PPP4R1-202ENST00000400555 KLHL8Q9P2G9 620 aaPredicted RBP13.11□□□□□ -0.31
PPP4R1-202ENST00000400555 CLEC11AQ9Y240 323 aa13.11□□□□□ -0.31
PPP4R1-202ENST00000400555 GOLGA8QA0A0J9YX86 632 aa13.11□□□□□ -0.31
PPP4R1-202ENST00000400555 GOLGA8OA6NCC3 632 aa13.11□□□□□ -0.31
PPP4R1-202ENST00000400555 GOLGA8NF8WBI6 632 aa13.11□□□□□ -0.31
PPP4R1-202ENST00000400555 NDC80O14777 642 aa13.11□□□□□ -0.31
PPP4R1-202ENST00000400555 DGKIO75912 1065 aa13.11□□□□□ -0.31
PPP4R1-202ENST00000400555 PIGRP01833 764 aa13.11□□□□□ -0.31
PPP4R1-202ENST00000400555 GOT1P17174 413 aa13.11□□□□□ -0.31
PPP4R1-202ENST00000400555 TPH1P17752 444 aa13.11□□□□□ -0.31
PPP4R1-202ENST00000400555 RPS12P25398 132 aaKnown RBP13.11□□□□□ -0.31
PPP4R1-202ENST00000400555 ZNF280AP59817 542 aaPredicted RBP13.11□□□□□ -0.31
PPP4R1-202ENST00000400555 NOMO1Q15155 1222 aa13.11□□□□□ -0.31
PPP4R1-202ENST00000400555 CCDC14Q49A88 953 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms