RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 RNF8O76064 485 aa16■□□□□ 0.15
CPSF7-202ENST00000394888 RECQL4O94761 1208 aa16■□□□□ 0.15
CPSF7-202ENST00000394888 CSH1P0DML2 217 aa16■□□□□ 0.15
CPSF7-202ENST00000394888 CSH2P0DML3 217 aa16■□□□□ 0.15
CPSF7-202ENST00000394888 DARSP14868 501 aaKnown RBP16■□□□□ 0.15
CPSF7-202ENST00000394888 CCNFP41002 786 aa16■□□□□ 0.15
CPSF7-202ENST00000394888 BASP1P80723 227 aaKnown RBP16■□□□□ 0.15
CPSF7-202ENST00000394888 SPARCL1Q14515 664 aa16■□□□□ 0.15
CPSF7-202ENST00000394888 PRKD1Q15139 912 aaPredicted RBP16■□□□□ 0.15
CPSF7-202ENST00000394888 BBS9Q3SYG4 887 aa16■□□□□ 0.15
CPSF7-202ENST00000394888 FAM47CQ5HY64 1035 aa16■□□□□ 0.15
CPSF7-202ENST00000394888 CCDC33Q8N5R6 958 aa16■□□□□ 0.15
CPSF7-202ENST00000394888 OSMRQ99650 979 aa16■□□□□ 0.15
CPSF7-202ENST00000394888 ARHGEF4Q9NR80 690 aa16■□□□□ 0.15
CPSF7-202ENST00000394888 NKIRAS1Q9NYS0 192 aa16■□□□□ 0.15
CPSF7-202ENST00000394888 TDRD15B5MCY1 1934 aaKnown RBP16■□□□□ 0.15
CPSF7-202ENST00000394888 FYNP06241 537 aa15.99■□□□□ 0.15
CPSF7-202ENST00000394888 PRAMEF19Q5SWL8 479 aa15.99■□□□□ 0.15
CPSF7-202ENST00000394888 OLFML2BQ68BL8 750 aa15.99■□□□□ 0.15
CPSF7-202ENST00000394888 TRMT10BQ6PF06 316 aaKnown RBP15.99■□□□□ 0.15
CPSF7-202ENST00000394888 BHLHA9Q7RTU4 235 aa15.99■□□□□ 0.15
CPSF7-202ENST00000394888 TP53INP2Q8IXH6 220 aa15.99■□□□□ 0.15
CPSF7-202ENST00000394888 CCDC110Q8TBZ0 833 aa15.99■□□□□ 0.15
CPSF7-202ENST00000394888 GRAMD1AQ96CP6 724 aa15.99■□□□□ 0.15
CPSF7-202ENST00000394888 SMC6Q96SB8 1091 aa15.99■□□□□ 0.15
CPSF7-202ENST00000394888 C20orf27Q9GZN8 174 aa15.99■□□□□ 0.15
CPSF7-202ENST00000394888 SYNCQ9H7C4 482 aa15.99■□□□□ 0.15
CPSF7-202ENST00000394888 H0YHG0 523 aa15.99■□□□□ 0.15
CPSF7-202ENST00000394888 ZWINTO95229 277 aa15.99■□□□□ 0.15
CPSF7-202ENST00000394888 ACCSLQ4AC99 568 aa15.99■□□□□ 0.15
CPSF7-202ENST00000394888 GSTCDQ8NEC7 633 aa15.99■□□□□ 0.15
CPSF7-202ENST00000394888 TINF2Q9BSI4 451 aa15.99■□□□□ 0.15
CPSF7-202ENST00000394888 DTLQ9NZJ0 730 aa15.99■□□□□ 0.15
CPSF7-202ENST00000394888 KLHL14Q9P2G3 628 aa15.99■□□□□ 0.15
CPSF7-202ENST00000394888 SMIM28A0A1B0GU29 152 aa15.99■□□□□ 0.15
CPSF7-202ENST00000394888 ZNF865P0CJ78 1059 aaPredicted RBP15.99■□□□□ 0.15
CPSF7-202ENST00000394888 CA4P22748 312 aa15.99■□□□□ 0.15
CPSF7-202ENST00000394888 TMEM132AQ24JP5 1023 aa15.99■□□□□ 0.15
CPSF7-202ENST00000394888 MORN1Q5T089 497 aa15.99■□□□□ 0.15
CPSF7-202ENST00000394888 DARS2Q6PI48 645 aaKnown RBP15.99■□□□□ 0.15
CPSF7-202ENST00000394888 DPF3Q92784 378 aa15.99■□□□□ 0.15
CPSF7-202ENST00000394888 CSPG4P5Q96PW8 444 aa15.99■□□□□ 0.15
CPSF7-202ENST00000394888 CFAP73A6NFT4 308 aa15.98■□□□□ 0.15
CPSF7-202ENST00000394888 SMAPO00193 183 aa15.98■□□□□ 0.15
CPSF7-202ENST00000394888 PTGESO14684 152 aa15.98■□□□□ 0.15
CPSF7-202ENST00000394888 KCNN4O15554 427 aa15.98■□□□□ 0.15
CPSF7-202ENST00000394888 GCATO75600 419 aa15.98■□□□□ 0.15
CPSF7-202ENST00000394888 KRT15P19012 456 aa15.98■□□□□ 0.15
CPSF7-202ENST00000394888 CYP2F1P24903 491 aa15.98■□□□□ 0.15
CPSF7-202ENST00000394888 ANKRD23Q86SG2 305 aa15.98■□□□□ 0.15
CPSF7-202ENST00000394888 CHSY1Q86X52 802 aa15.98■□□□□ 0.15
CPSF7-202ENST00000394888 UPF1Q92900 1129 aaKnown RBP eCLIP15.98■□□□□ 0.157e-8■■■□□ 18.4
CPSF7-202ENST00000394888 QKIQ96PU8 341 aaKnown RBP eCLIP15.98■□□□□ 0.15
CPSF7-202ENST00000394888 TMEM237Q96Q45 408 aa15.98■□□□□ 0.15
CPSF7-202ENST00000394888 MIPEPQ99797 713 aa15.98■□□□□ 0.15
CPSF7-202ENST00000394888 SYT17Q9BSW7 474 aa15.98■□□□□ 0.15
CPSF7-202ENST00000394888 LRMDAQ9H2I8 198 aa15.98■□□□□ 0.15
CPSF7-202ENST00000394888 STRNO43815 780 aa15.98■□□□□ 0.15
CPSF7-202ENST00000394888 DLDP09622 509 aaKnown RBP15.98■□□□□ 0.15
CPSF7-202ENST00000394888 SETSIPP0DME0 302 aa15.98■□□□□ 0.15
CPSF7-202ENST00000394888 SNCBQ16143 134 aa15.98■□□□□ 0.15
CPSF7-202ENST00000394888 TEX44Q53QW1 395 aa15.98■□□□□ 0.15
CPSF7-202ENST00000394888 UNC5AQ6ZN44 842 aa15.98■□□□□ 0.15
CPSF7-202ENST00000394888 AGAP11Q8TF27 550 aa15.98■□□□□ 0.15
CPSF7-202ENST00000394888 TBCBQ99426 244 aa15.98■□□□□ 0.15
CPSF7-202ENST00000394888 EBF2Q9HAK2 575 aa15.98■□□□□ 0.15
CPSF7-202ENST00000394888 MCM8Q9UJA3 840 aa15.98■□□□□ 0.15
CPSF7-202ENST00000394888 UNCXA6NJT0 531 aa15.98■□□□□ 0.15
CPSF7-202ENST00000394888 MEIS3P2A8K0S8 358 aa15.98■□□□□ 0.15
CPSF7-202ENST00000394888 CHUKO15111 745 aa15.98■□□□□ 0.15
CPSF7-202ENST00000394888 TOP3BO95985 862 aaKnown RBP15.98■□□□□ 0.15
CPSF7-202ENST00000394888 IL1BP01584 269 aa15.98■□□□□ 0.15
CPSF7-202ENST00000394888 KCNE1P15382 129 aa15.98■□□□□ 0.15
CPSF7-202ENST00000394888 TTLL12Q14166 644 aaPredicted RBP15.98■□□□□ 0.15
CPSF7-202ENST00000394888 SESTD1Q86VW0 696 aa15.98■□□□□ 0.15
CPSF7-202ENST00000394888 UNC93AQ86WB7 457 aa15.98■□□□□ 0.15
CPSF7-202ENST00000394888 UNC5BQ8IZJ1 945 aa15.98■□□□□ 0.15
CPSF7-202ENST00000394888 NETO2Q8NC67 525 aa15.98■□□□□ 0.15
CPSF7-202ENST00000394888 TLE6Q9H808 572 aa15.98■□□□□ 0.15
CPSF7-202ENST00000394888 RAB6BQ9NRW1 208 aa15.98■□□□□ 0.15
CPSF7-202ENST00000394888 CACNG4Q9UBN1 327 aa15.98■□□□□ 0.15
CPSF7-202ENST00000394888 TRAFD1O14545 582 aaPredicted RBP15.97■□□□□ 0.15
CPSF7-202ENST00000394888 TM9SF1O15321 606 aa15.97■□□□□ 0.15
CPSF7-202ENST00000394888 P4HA1P13674 534 aa15.97■□□□□ 0.15
CPSF7-202ENST00000394888 SCNN1AP37088 669 aa15.97■□□□□ 0.15
CPSF7-202ENST00000394888 AFF1P51825 1210 aaKnown RBP15.97■□□□□ 0.15
CPSF7-202ENST00000394888 KLHL38Q2WGJ6 581 aa15.97■□□□□ 0.15
CPSF7-202ENST00000394888 BOLA3Q53S33 107 aa15.97■□□□□ 0.15
CPSF7-202ENST00000394888 ANKRD52Q8NB46 1076 aa15.97■□□□□ 0.15
CPSF7-202ENST00000394888 ARNTL2Q8WYA1 636 aa15.97■□□□□ 0.15
CPSF7-202ENST00000394888 SKA1Q96BD8 255 aa15.97■□□□□ 0.15
CPSF7-202ENST00000394888 MIS12Q9H081 205 aa15.97■□□□□ 0.15
CPSF7-202ENST00000394888 FAM159BA6NKW6 160 aa15.97■□□□□ 0.15
CPSF7-202ENST00000394888 PRPSAP2O60256 369 aa15.97■□□□□ 0.15
CPSF7-202ENST00000394888 OR6J1Q8NGC5 347 aa15.97■□□□□ 0.15
CPSF7-202ENST00000394888 PTCD3Q96EY7 689 aaKnown RBP15.97■□□□□ 0.15
CPSF7-202ENST00000394888 PGLYRP2Q96PD5 576 aa15.97■□□□□ 0.15
CPSF7-202ENST00000394888 FZD10Q9ULW2 581 aa15.97■□□□□ 0.15
CPSF7-202ENST00000394888 SMIM35A0A1B0GVV1 85 aa15.97■□□□□ 0.15
CPSF7-202ENST00000394888 APOL1O14791 398 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms