RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 KPNA1P52294 538 aaPredicted RBP13.54□□□□□ -0.24
PTPRN2-202ENST00000389416 ACLYP53396 1101 aa13.54□□□□□ -0.24
PTPRN2-202ENST00000389416 PPM1LQ5SGD2 360 aa13.54□□□□□ -0.24
PTPRN2-202ENST00000389416 TIGD7Q6NT04 549 aaPredicted RBP13.54□□□□□ -0.24
PTPRN2-202ENST00000389416 RASAL3Q86YV0 1011 aa13.54□□□□□ -0.24
PTPRN2-202ENST00000389416 NUF2Q9BZD4 464 aa13.54□□□□□ -0.24
PTPRN2-202ENST00000389416 DPP7Q9UHL4 492 aa13.54□□□□□ -0.24
PTPRN2-202ENST00000389416 PKP3Q9Y446 797 aa13.54□□□□□ -0.24
PTPRN2-202ENST00000389416 FRMD3A2A2Y4 597 aa13.54□□□□□ -0.24
PTPRN2-202ENST00000389416 OR1D2P34982 312 aa13.54□□□□□ -0.24
PTPRN2-202ENST00000389416 CTNNB1P35222 781 aa13.54□□□□□ -0.24
PTPRN2-202ENST00000389416 RHOAP61586 193 aa13.54□□□□□ -0.24
PTPRN2-202ENST00000389416 MARC1Q5VT66 337 aa13.54□□□□□ -0.24
PTPRN2-202ENST00000389416 PTRHD1Q6GMV3 140 aaKnown RBP13.54□□□□□ -0.24
PTPRN2-202ENST00000389416 KCNT2Q6UVM3 1135 aa13.54□□□□□ -0.24
PTPRN2-202ENST00000389416 LGI2Q8N0V4 545 aa13.54□□□□□ -0.24
PTPRN2-202ENST00000389416 VCXQ9H320 206 aa13.54□□□□□ -0.24
PTPRN2-202ENST00000389416 TASP1Q9H6P5 420 aa13.54□□□□□ -0.24
PTPRN2-202ENST00000389416 AAR2Q9Y312 384 aaKnown RBP13.54□□□□□ -0.24
PTPRN2-202ENST00000389416 TRIM49D1C9J1S8 452 aa13.54□□□□□ -0.24
PTPRN2-202ENST00000389416 SERPINB9P50453 376 aa13.54□□□□□ -0.24
PTPRN2-202ENST00000389416 TSNAXIP1Q2TAA8 658 aa13.54□□□□□ -0.24
PTPRN2-202ENST00000389416 CREG2Q8IUH2 290 aa13.54□□□□□ -0.24
PTPRN2-202ENST00000389416 CALML6Q8TD86 181 aa13.54□□□□□ -0.24
PTPRN2-202ENST00000389416 B3GNT5Q9BYG0 378 aa13.54□□□□□ -0.24
PTPRN2-202ENST00000389416 SLC45A1Q9Y2W3 748 aa13.54□□□□□ -0.24
PTPRN2-202ENST00000389416 TCP11X1B4DZS4 312 aa13.54□□□□□ -0.24
PTPRN2-202ENST00000389416 OR4Q2P0C623 313 aa13.54□□□□□ -0.24
PTPRN2-202ENST00000389416 CHN1P15882 459 aa13.54□□□□□ -0.24
PTPRN2-202ENST00000389416 CHRM3P20309 590 aa13.54□□□□□ -0.24
PTPRN2-202ENST00000389416 CSE1LP55060 971 aaKnown RBP13.54□□□□□ -0.24
PTPRN2-202ENST00000389416 SLC10A6Q3KNW5 377 aa13.54□□□□□ -0.24
PTPRN2-202ENST00000389416 USP41Q3LFD5 358 aa13.54□□□□□ -0.24
PTPRN2-202ENST00000389416 LRIG3Q6UXM1 1119 aa13.54□□□□□ -0.24
PTPRN2-202ENST00000389416 ABCC13Q9NSE7 274 aa13.54□□□□□ -0.24
PTPRN2-202ENST00000389416 OLA1Q9NTK5 396 aaKnown RBP13.54□□□□□ -0.24
PTPRN2-202ENST00000389416 SUN2Q9UH99 717 aa13.54□□□□□ -0.24
PTPRN2-202ENST00000389416 SDR42E2A6NKP2 422 aa13.53□□□□□ -0.24
PTPRN2-202ENST00000389416 SMIM24O75264 130 aa13.53□□□□□ -0.24
PTPRN2-202ENST00000389416 SYF2O95926 243 aaKnown RBP13.53□□□□□ -0.24
PTPRN2-202ENST00000389416 ARFIP2P53365 341 aa13.53□□□□□ -0.24
PTPRN2-202ENST00000389416 LAMB3Q13751 1172 aa13.53□□□□□ -0.24
PTPRN2-202ENST00000389416 HIBCHQ6NVY1 386 aaPredicted RBP13.53□□□□□ -0.24
PTPRN2-202ENST00000389416 ANKS3Q6ZW76 656 aa13.53□□□□□ -0.24
PTPRN2-202ENST00000389416 PCDHB18PQ96TA0 734 aa13.53□□□□□ -0.24
PTPRN2-202ENST00000389416 VCX3BQ9H321 246 aa13.53□□□□□ -0.24
PTPRN2-202ENST00000389416 ATP13A1Q9HD20 1204 aa13.53□□□□□ -0.24
PTPRN2-202ENST00000389416 MARCOQ9UEW3 520 aaPredicted RBP13.53□□□□□ -0.24
PTPRN2-202ENST00000389416 TRIM66O15016 1216 aa13.53□□□□□ -0.24
PTPRN2-202ENST00000389416 NOL4O94818 638 aa13.53□□□□□ -0.24
PTPRN2-202ENST00000389416 GRB14Q14449 540 aa13.53□□□□□ -0.24
PTPRN2-202ENST00000389416 IMPG1Q17R60 797 aa13.53□□□□□ -0.24
PTPRN2-202ENST00000389416 WDR93Q6P2C0 686 aa13.53□□□□□ -0.24
PTPRN2-202ENST00000389416 ACAD11Q709F0 780 aa13.53□□□□□ -0.24
PTPRN2-202ENST00000389416 ZNF467Q7Z7K2 595 aaPredicted RBP13.53□□□□□ -0.24
PTPRN2-202ENST00000389416 FAM136AQ96C01 138 aa13.53□□□□□ -0.24
PTPRN2-202ENST00000389416 PPP1R36Q96LQ0 422 aa13.53□□□□□ -0.24
PTPRN2-202ENST00000389416 LRGUKQ96M69 825 aa13.53□□□□□ -0.24
PTPRN2-202ENST00000389416 PRMT1Q99873 361 aaKnown RBP13.53□□□□□ -0.24
PTPRN2-202ENST00000389416 FZD8Q9H461 694 aa13.53□□□□□ -0.24
PTPRN2-202ENST00000389416 OR12D3Q9UGF7 316 aa13.53□□□□□ -0.24
PTPRN2-202ENST00000389416 TMEM120BA0PK00 339 aa13.53□□□□□ -0.24
PTPRN2-202ENST00000389416 PPP1R37O75864 691 aa13.53□□□□□ -0.24
PTPRN2-202ENST00000389416 CKBP12277 381 aa13.53□□□□□ -0.24
PTPRN2-202ENST00000389416 KDELR1P24390 212 aa13.53□□□□□ -0.24
PTPRN2-202ENST00000389416 ATP5C1P36542 298 aaKnown RBP13.53□□□□□ -0.24
PTPRN2-202ENST00000389416 ACAP1Q15027 740 aa13.53□□□□□ -0.24
PTPRN2-202ENST00000389416 PSMD5Q16401 504 aa13.53□□□□□ -0.24
PTPRN2-202ENST00000389416 FAM35AQ86V20 835 aa13.53□□□□□ -0.24
PTPRN2-202ENST00000389416 ATAD1Q8NBU5 361 aa13.53□□□□□ -0.24
PTPRN2-202ENST00000389416 KAT2BQ92831 832 aa13.53□□□□□ -0.24
PTPRN2-202ENST00000389416 SGF29Q96ES7 293 aa13.53□□□□□ -0.24
PTPRN2-202ENST00000389416 TMA16Q96EY4 203 aaKnown RBP13.53□□□□□ -0.24
PTPRN2-202ENST00000389416 FICDQ9BVA6 458 aa13.53□□□□□ -0.24
PTPRN2-202ENST00000389416 CDC42EP4Q9H3Q1 356 aaKnown RBP13.53□□□□□ -0.24
PTPRN2-202ENST00000389416 CRLS1Q9UJA2 301 aa13.53□□□□□ -0.24
PTPRN2-202ENST00000389416 SMG5Q9UPR3 1016 aaKnown RBP13.53□□□□□ -0.24
PTPRN2-202ENST00000389416 ZNF143P52747 638 aaPredicted RBP13.52□□□□□ -0.24
PTPRN2-202ENST00000389416 SDE2Q6IQ49 451 aa13.52□□□□□ -0.24
PTPRN2-202ENST00000389416 HERC6Q8IVU3 1022 aa13.52□□□□□ -0.24
PTPRN2-202ENST00000389416 HS6ST3Q8IZP7 471 aa13.52□□□□□ -0.24
PTPRN2-202ENST00000389416 ANKRD7Q92527 254 aa13.52□□□□□ -0.24
PTPRN2-202ENST00000389416 RSRC1Q96IZ7 334 aaKnown RBP13.52□□□□□ -0.24
PTPRN2-202ENST00000389416 TXLNGQ9NUQ3 528 aa13.52□□□□□ -0.24
PTPRN2-202ENST00000389416 DMAC2Q9NW81 257 aa13.52□□□□□ -0.24
PTPRN2-202ENST00000389416 WHRNQ9P202 907 aa13.52□□□□□ -0.24
PTPRN2-202ENST00000389416 FAM47DPA6NHR8 397 aa13.52□□□□□ -0.24
PTPRN2-202ENST00000389416 CYP1A2P05177 515 aa13.52□□□□□ -0.24
PTPRN2-202ENST00000389416 RARGP13631 454 aa13.52□□□□□ -0.24
PTPRN2-202ENST00000389416 NLRP14Q86W24 1093 aa13.52□□□□□ -0.24
PTPRN2-202ENST00000389416 PHF13Q86YI8 300 aaPredicted RBP13.52□□□□□ -0.24
PTPRN2-202ENST00000389416 MINDY3Q9H8M7 445 aa13.52□□□□□ -0.24
PTPRN2-202ENST00000389416 PCDH9Q9HC56 1237 aa13.52□□□□□ -0.24
PTPRN2-202ENST00000389416 STRCQ7RTU9 1775 aa13.52□□□□□ -0.24
PTPRN2-202ENST00000389416 O00370 1275 aa13.52□□□□□ -0.25
PTPRN2-202ENST00000389416 IGF2BP3O00425 579 aaKnown RBP eCLIP13.52□□□□□ -0.25
PTPRN2-202ENST00000389416 NCAM2O15394 837 aa13.52□□□□□ -0.25
PTPRN2-202ENST00000389416 DCTN3O75935 186 aa13.52□□□□□ -0.25
PTPRN2-202ENST00000389416 TPH1P17752 444 aa13.52□□□□□ -0.25
PTPRN2-202ENST00000389416 CLCNKBP51801 687 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms