RNA–Protein interactions for RNA: ENST00000380285.7

SNX1-202, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 8,119 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-202ENST00000380285 MLH1P40692 756 aa9.85□□□□□ -0.83
SNX1-202ENST00000380285 PPP3CCP48454 512 aa9.85□□□□□ -0.83
SNX1-202ENST00000380285 TAF6P49848 677 aa9.85□□□□□ -0.83
SNX1-202ENST00000380285 CHN2P52757 468 aa9.85□□□□□ -0.83
SNX1-202ENST00000380285 MFSD14CQ5VZR4 134 aa9.85□□□□□ -0.83
SNX1-202ENST00000380285 ZNF772Q68DY9 489 aaPredicted RBP9.85□□□□□ -0.83
SNX1-202ENST00000380285 FBXO33Q7Z6M2 555 aa9.85□□□□□ -0.83
SNX1-202ENST00000380285 SLFN11Q7Z7L1 901 aa9.85□□□□□ -0.83
SNX1-202ENST00000380285 S100ZQ8WXG8 99 aa9.85□□□□□ -0.83
SNX1-202ENST00000380285 SLC25A23Q9BV35 468 aa9.85□□□□□ -0.83
SNX1-202ENST00000380285 SEMA6BQ9H3T3 888 aa9.85□□□□□ -0.83
SNX1-202ENST00000380285 DAGLAQ9Y4D2 1042 aa9.85□□□□□ -0.83
SNX1-202ENST00000380285 PSMG1O95456 288 aa9.85□□□□□ -0.83
SNX1-202ENST00000380285 HARS2P49590 506 aaKnown RBP9.85□□□□□ -0.83
SNX1-202ENST00000380285 FOXR2Q6PJQ5 311 aa9.85□□□□□ -0.83
SNX1-202ENST00000380285 WDR49Q8IV35 697 aa9.85□□□□□ -0.83
SNX1-202ENST00000380285 NSMCE2Q96MF7 247 aa9.85□□□□□ -0.83
SNX1-202ENST00000380285 WDCPQ9H6R7 721 aa9.85□□□□□ -0.83
SNX1-202ENST00000380285 NBPF26B4DH59 902 aa9.85□□□□□ -0.83
SNX1-202ENST00000380285 NBNO60934 754 aa9.85□□□□□ -0.83
SNX1-202ENST00000380285 UNC5CO95185 931 aa9.85□□□□□ -0.83
SNX1-202ENST00000380285 CHRM3P20309 590 aa9.85□□□□□ -0.83
SNX1-202ENST00000380285 SSTR3P32745 418 aaPredicted RBP9.85□□□□□ -0.83
SNX1-202ENST00000380285 ALDH5A1P51649 535 aaPredicted RBP9.85□□□□□ -0.83
SNX1-202ENST00000380285 PDZK1Q5T2W1 519 aa9.85□□□□□ -0.83
SNX1-202ENST00000380285 NBPF15Q8N660 670 aa9.85□□□□□ -0.83
SNX1-202ENST00000380285 CKAP2Q8WWK9 683 aa9.85□□□□□ -0.83
SNX1-202ENST00000380285 ZNF75CPQ92670 426 aaPredicted RBP9.85□□□□□ -0.83
SNX1-202ENST00000380285 TATDN2Q93075 761 aa9.85□□□□□ -0.83
SNX1-202ENST00000380285 COQ7Q99807 217 aa9.85□□□□□ -0.83
SNX1-202ENST00000380285 LRRC10BA6NIK2 292 aa9.85□□□□□ -0.83
SNX1-202ENST00000380285 NR3C2P08235 984 aa9.85□□□□□ -0.83
SNX1-202ENST00000380285 TXNP10599 105 aaKnown RBP9.85□□□□□ -0.83
SNX1-202ENST00000380285 PGAM1P18669 254 aa9.85□□□□□ -0.83
SNX1-202ENST00000380285 BGNP21810 368 aa9.85□□□□□ -0.83
SNX1-202ENST00000380285 ST8SIA6P61647 398 aa9.85□□□□□ -0.83
SNX1-202ENST00000380285 IL31Q6EBC2 164 aa9.85□□□□□ -0.83
SNX1-202ENST00000380285 CAMK1DQ8IU85 385 aa9.85□□□□□ -0.83
SNX1-202ENST00000380285 C6orf203Q9P0P8 240 aaPredicted RBP9.85□□□□□ -0.83
SNX1-202ENST00000380285 PIM2Q9P1W9 311 aa9.85□□□□□ -0.83
SNX1-202ENST00000380285 UBQLN1Q9UMX0 589 aaKnown RBP9.85□□□□□ -0.83
SNX1-202ENST00000380285 GIT2Q14161 759 aa9.85□□□□□ -0.83
SNX1-202ENST00000380285 TMEM26Q6ZUK4 368 aa9.85□□□□□ -0.83
SNX1-202ENST00000380285 CREG2Q8IUH2 290 aa9.85□□□□□ -0.83
SNX1-202ENST00000380285 OR8H2Q8N162 312 aa9.85□□□□□ -0.83
SNX1-202ENST00000380285 CINPQ9BW66 212 aaPredicted RBP9.85□□□□□ -0.83
SNX1-202ENST00000380285 MUC3BQ9H195 1237 aa9.85□□□□□ -0.83
SNX1-202ENST00000380285 POLD4Q9HCU8 107 aa9.85□□□□□ -0.83
SNX1-202ENST00000380285 SGPL1O95470 568 aa9.85□□□□□ -0.83
SNX1-202ENST00000380285 ACAT1P24752 427 aaKnown RBP9.85□□□□□ -0.83
SNX1-202ENST00000380285 NPY2RP49146 381 aa9.85□□□□□ -0.83
SNX1-202ENST00000380285 EXOC3L1Q86VI1 746 aa9.85□□□□□ -0.83
SNX1-202ENST00000380285 MYLK2Q9H1R3 596 aa9.85□□□□□ -0.83
SNX1-202ENST00000380285 KCNH7Q9NS40 1196 aa9.85□□□□□ -0.83
SNX1-202ENST00000380285 TRHDEQ9UKU6 1024 aa9.85□□□□□ -0.83
SNX1-202ENST00000380285 GPR75-ASB3A0A0A6YYF3 556 aa9.84□□□□□ -0.83
SNX1-202ENST00000380285 ABCB1P08183 1280 aaPredicted RBP9.84□□□□□ -0.83
SNX1-202ENST00000380285 MMP10P09238 476 aa9.84□□□□□ -0.83
SNX1-202ENST00000380285 NCAM1P13591 858 aa9.84□□□□□ -0.83
SNX1-202ENST00000380285 RFX5P48382 616 aaPredicted RBP9.84□□□□□ -0.83
SNX1-202ENST00000380285 CACNB3P54284 484 aa9.84□□□□□ -0.83
SNX1-202ENST00000380285 NR1H2P55055 460 aa9.84□□□□□ -0.83
SNX1-202ENST00000380285 ITGB3BPQ13352 177 aaPredicted RBP9.84□□□□□ -0.83
SNX1-202ENST00000380285 FRG1Q14331 258 aaKnown RBP9.84□□□□□ -0.83
SNX1-202ENST00000380285 ERMARDQ5T6L9 678 aa9.84□□□□□ -0.83
SNX1-202ENST00000380285 FGD2Q7Z6J4 655 aa9.84□□□□□ -0.83
SNX1-202ENST00000380285 KRT78Q8N1N4 520 aa9.84□□□□□ -0.83
SNX1-202ENST00000380285 TLR10Q9BXR5 811 aa9.84□□□□□ -0.83
SNX1-202ENST00000380285 SEMA4AQ9H3S1 761 aa9.84□□□□□ -0.83
SNX1-202ENST00000380285 VANGL2Q9ULK5 521 aa9.84□□□□□ -0.83
SNX1-202ENST00000380285 CLOCKO15516 846 aa9.84□□□□□ -0.83
SNX1-202ENST00000380285 GCNT1Q02742 428 aa9.84□□□□□ -0.83
SNX1-202ENST00000380285 BFSP2Q13515 415 aa9.84□□□□□ -0.83
SNX1-202ENST00000380285 CDK5RAP1Q96SZ6 601 aaKnown RBP9.84□□□□□ -0.83
SNX1-202ENST00000380285 KCTD10Q9H3F6 313 aa9.84□□□□□ -0.83
SNX1-202ENST00000380285 PCYOX1Q9UHG3 505 aa9.84□□□□□ -0.83
SNX1-202ENST00000380285 AREL1O15033 823 aa9.84□□□□□ -0.83
SNX1-202ENST00000380285 ATP6V1B2P21281 511 aa9.84□□□□□ -0.83
SNX1-202ENST00000380285 TOB1P50616 345 aaPredicted RBP9.84□□□□□ -0.83
SNX1-202ENST00000380285 ZRANB3Q5FWF4 1079 aa9.84□□□□□ -0.83
SNX1-202ENST00000380285 ARCQ7LC44 396 aa9.84□□□□□ -0.83
SNX1-202ENST00000380285 MYO1HQ8N1T3 1032 aa9.84□□□□□ -0.83
SNX1-202ENST00000380285 PAIP1Q9H074 479 aaKnown RBP9.84□□□□□ -0.83
SNX1-202ENST00000380285 CD163L1Q9NR16 1453 aa9.84□□□□□ -0.83
SNX1-202ENST00000380285 ODC1P11926 461 aa9.84□□□□□ -0.83
SNX1-202ENST00000380285 ATP4AP20648 1035 aa9.84□□□□□ -0.83
SNX1-202ENST00000380285 SOAT1P35610 550 aa9.84□□□□□ -0.83
SNX1-202ENST00000380285 KPNA1P52294 538 aaPredicted RBP9.84□□□□□ -0.83
SNX1-202ENST00000380285 PCSK7Q16549 785 aa9.84□□□□□ -0.83
SNX1-202ENST00000380285 RGS21Q2M5E4 152 aa9.84□□□□□ -0.83
SNX1-202ENST00000380285 PPP4R4Q6NUP7 873 aa9.84□□□□□ -0.83
SNX1-202ENST00000380285 ZNF720Q7Z2F6 126 aa9.84□□□□□ -0.83
SNX1-202ENST00000380285 DHRSXQ8N5I4 330 aa9.84□□□□□ -0.83
SNX1-202ENST00000380285 SLITRK1Q96PX8 696 aa9.84□□□□□ -0.83
SNX1-202ENST00000380285 ADAM33Q9BZ11 813 aa9.84□□□□□ -0.83
SNX1-202ENST00000380285 CACNA2D2Q9NY47 1150 aa9.84□□□□□ -0.83
SNX1-202ENST00000380285 UBAP1Q9NZ09 502 aa9.84□□□□□ -0.83
SNX1-202ENST00000380285 MOSPD1Q9UJG1 213 aa9.84□□□□□ -0.83
SNX1-202ENST00000380285 DSEQ9UL01 958 aa9.84□□□□□ -0.83
SNX1-202ENST00000380285 FAM237AA0A1B0GTK4 181 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms