RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 ESRRBO95718 433 aa9.88□□□□□ -0.83
SF3A3-201ENST00000373019 CHEK2O96017 543 aa9.88□□□□□ -0.83
SF3A3-201ENST00000373019 UBL4AP11441 157 aa9.88□□□□□ -0.83
SF3A3-201ENST00000373019 GZMAP12544 262 aa9.88□□□□□ -0.83
SF3A3-201ENST00000373019 IREB2P48200 963 aaKnown RBP9.88□□□□□ -0.83
SF3A3-201ENST00000373019 MRPS22P82650 360 aaKnown RBP9.88□□□□□ -0.83
SF3A3-201ENST00000373019 BMT2Q1RMZ1 405 aa9.88□□□□□ -0.83
SF3A3-201ENST00000373019 MIER3Q7Z3K6 550 aa9.88□□□□□ -0.83
SF3A3-201ENST00000373019 GPR141Q7Z602 305 aa9.88□□□□□ -0.83
SF3A3-201ENST00000373019 MMAAQ8IVH4 418 aaKnown RBP9.88□□□□□ -0.83
SF3A3-201ENST00000373019 SIX5Q8N196 739 aa9.88□□□□□ -0.83
SF3A3-201ENST00000373019 ATP6V0D2Q8N8Y2 350 aa9.88□□□□□ -0.83
SF3A3-201ENST00000373019 Q8N9G6 341 aaPredicted RBP9.88□□□□□ -0.83
SF3A3-201ENST00000373019 TMEM102Q8N9M5 508 aaPredicted RBP9.88□□□□□ -0.83
SF3A3-201ENST00000373019 OTUD5Q96G74 571 aa9.88□□□□□ -0.83
SF3A3-201ENST00000373019 ZNF778Q96MU6 729 aa9.88□□□□□ -0.83
SF3A3-201ENST00000373019 GPR101Q96P66 508 aaPredicted RBP9.88□□□□□ -0.83
SF3A3-201ENST00000373019 UIMC1Q96RL1 719 aa9.88□□□□□ -0.83
SF3A3-201ENST00000373019 HERC2P3Q9BVR0 1158 aa9.88□□□□□ -0.83
SF3A3-201ENST00000373019 ANO3Q9BYT9 981 aa9.88□□□□□ -0.83
SF3A3-201ENST00000373019 GCOM2Q9BZD3 368 aaPredicted RBP9.88□□□□□ -0.83
SF3A3-201ENST00000373019 DCP1AQ9NPI6 582 aaPredicted RBP9.88□□□□□ -0.83
SF3A3-201ENST00000373019 B3GNT3Q9Y2A9 372 aa9.88□□□□□ -0.83
SF3A3-201ENST00000373019 CPQQ9Y646 472 aa9.88□□□□□ -0.83
SF3A3-201ENST00000373019 KIAA1551Q9HCM1 1747 aa9.88□□□□□ -0.83
SF3A3-201ENST00000373019 PLOD2O00469 737 aa9.88□□□□□ -0.83
SF3A3-201ENST00000373019 LDHCP07864 332 aa9.88□□□□□ -0.83
SF3A3-201ENST00000373019 TRIM49P0CI25 452 aa9.88□□□□□ -0.83
SF3A3-201ENST00000373019 TRIM49CP0CI26 452 aa9.88□□□□□ -0.83
SF3A3-201ENST00000373019 PTPN1P18031 435 aaKnown RBP9.88□□□□□ -0.83
SF3A3-201ENST00000373019 HSPA13P48723 471 aa9.88□□□□□ -0.83
SF3A3-201ENST00000373019 TFAP4Q01664 338 aa9.88□□□□□ -0.83
SF3A3-201ENST00000373019 AARS2Q5JTZ9 985 aaKnown RBP9.88□□□□□ -0.83
SF3A3-201ENST00000373019 FAM182AQ5T1J6 154 aa9.88□□□□□ -0.83
SF3A3-201ENST00000373019 GSTA5Q7RTV2 222 aa9.88□□□□□ -0.83
SF3A3-201ENST00000373019 IGFN1Q86VF2 1251 aa9.88□□□□□ -0.83
SF3A3-201ENST00000373019 TTC39CQ8N584 583 aa9.88□□□□□ -0.83
SF3A3-201ENST00000373019 ADAMTS16Q8TE57 1224 aa9.88□□□□□ -0.83
SF3A3-201ENST00000373019 EPS8L1Q8TE68 723 aa9.88□□□□□ -0.83
SF3A3-201ENST00000373019 REEP2Q9BRK0 252 aa9.88□□□□□ -0.83
SF3A3-201ENST00000373019 TRIM56Q9BRZ2 755 aaKnown RBP9.88□□□□□ -0.83
SF3A3-201ENST00000373019 ANLNQ9NQW6 1124 aa9.88□□□□□ -0.83
SF3A3-201ENST00000373019 SIRPGQ9P1W8 387 aa9.88□□□□□ -0.83
SF3A3-201ENST00000373019 MYRFQ9Y2G1 1151 aa9.88□□□□□ -0.83
SF3A3-201ENST00000373019 CFAP99D6REC4 459 aa9.87□□□□□ -0.83
SF3A3-201ENST00000373019 G3V3G9 751 aa9.87□□□□□ -0.83
SF3A3-201ENST00000373019 GOLGA8SH3BPF8 625 aa9.87□□□□□ -0.83
SF3A3-201ENST00000373019 GOLGA8MH3BSY2 632 aa9.87□□□□□ -0.83
SF3A3-201ENST00000373019 SLITRK3O94933 977 aa9.87□□□□□ -0.83
SF3A3-201ENST00000373019 MT-ND3P03897 115 aa9.87□□□□□ -0.83
SF3A3-201ENST00000373019 ATP5BP06576 529 aaKnown RBP9.87□□□□□ -0.83
SF3A3-201ENST00000373019 JAK1P23458 1154 aa9.87□□□□□ -0.83
SF3A3-201ENST00000373019 PSMC6P62333 389 aa9.87□□□□□ -0.83
SF3A3-201ENST00000373019 TMPRSS15P98073 1019 aa9.87□□□□□ -0.83
SF3A3-201ENST00000373019 GNA12Q03113 381 aa9.87□□□□□ -0.83
SF3A3-201ENST00000373019 DCAF8Q5TAQ9 597 aa9.87□□□□□ -0.83
SF3A3-201ENST00000373019 SIGIRRQ6IA17 410 aa9.87□□□□□ -0.83
SF3A3-201ENST00000373019 ARHGEF19Q8IW93 802 aa9.87□□□□□ -0.83
SF3A3-201ENST00000373019 CATSPER1Q8NEC5 780 aa9.87□□□□□ -0.83
SF3A3-201ENST00000373019 LILRB4Q8NHJ6 448 aa9.87□□□□□ -0.83
SF3A3-201ENST00000373019 WNK4Q96J92 1243 aa9.87□□□□□ -0.83
SF3A3-201ENST00000373019 MROQ9BYG7 248 aa9.87□□□□□ -0.83
SF3A3-201ENST00000373019 NAA50Q9GZZ1 169 aaKnown RBP9.87□□□□□ -0.83
SF3A3-201ENST00000373019 GTF3C4Q9UKN8 822 aa9.87□□□□□ -0.83
SF3A3-201ENST00000373019 DNM3Q9UQ16 869 aa9.87□□□□□ -0.83
SF3A3-201ENST00000373019 SCINQ9Y6U3 715 aa9.87□□□□□ -0.83
SF3A3-201ENST00000373019 USP17L3A6NCW0 530 aa9.87□□□□□ -0.83
SF3A3-201ENST00000373019 USP17L4A6NCW7 530 aa9.87□□□□□ -0.83
SF3A3-201ENST00000373019 ZMPSTE24O75844 475 aa9.87□□□□□ -0.83
SF3A3-201ENST00000373019 ENO2P09104 434 aaPredicted RBP9.87□□□□□ -0.83
SF3A3-201ENST00000373019 CD1EP15812 388 aa9.87□□□□□ -0.83
SF3A3-201ENST00000373019 EIF2AK2P19525 551 aaKnown RBP9.87□□□□□ -0.83
SF3A3-201ENST00000373019 HNRNPFP52597 415 aaKnown RBP9.87□□□□□ -0.83
SF3A3-201ENST00000373019 MLLT10P55197 1068 aa9.87□□□□□ -0.83
SF3A3-201ENST00000373019 MRPS5P82675 430 aaKnown RBP9.87□□□□□ -0.83
SF3A3-201ENST00000373019 MORF4L2Q15014 288 aa9.87□□□□□ -0.83
SF3A3-201ENST00000373019 NRF1Q16656 503 aa9.87□□□□□ -0.83
SF3A3-201ENST00000373019 WDR45BQ5MNZ6 344 aa9.87□□□□□ -0.83
SF3A3-201ENST00000373019 FNBP1LQ5T0N5 605 aa9.87□□□□□ -0.83
SF3A3-201ENST00000373019 USP17L1Q7RTZ2 530 aa9.87□□□□□ -0.83
SF3A3-201ENST00000373019 BTLAQ7Z6A9 289 aa9.87□□□□□ -0.83
SF3A3-201ENST00000373019 ELMOD1Q8N336 334 aa9.87□□□□□ -0.83
SF3A3-201ENST00000373019 FIBCD1Q8N539 461 aa9.87□□□□□ -0.83
SF3A3-201ENST00000373019 E2F7Q96AV8 911 aa9.87□□□□□ -0.83
SF3A3-201ENST00000373019 CEP95Q96GE4 821 aa9.87□□□□□ -0.83
SF3A3-201ENST00000373019 ALPK1Q96QP1 1244 aa9.87□□□□□ -0.83
SF3A3-201ENST00000373019 DNPEPQ9ULA0 475 aa9.87□□□□□ -0.83
SF3A3-201ENST00000373019 ZNF536O15090 1300 aa9.87□□□□□ -0.83
SF3A3-201ENST00000373019 LOC100653049A0A140TA62 436 aa9.87□□□□□ -0.83
SF3A3-201ENST00000373019 CCDC195A0A1B0GUA6 201 aa9.87□□□□□ -0.83
SF3A3-201ENST00000373019 PRSS51A0A1B0GVH4 220 aa9.87□□□□□ -0.83
SF3A3-201ENST00000373019 ESYT2A0FGR8 921 aa9.87□□□□□ -0.83
SF3A3-201ENST00000373019 CLOCKO15516 846 aa9.87□□□□□ -0.83
SF3A3-201ENST00000373019 DYNC1LI2O43237 492 aaPredicted RBP9.87□□□□□ -0.83
SF3A3-201ENST00000373019 ZC3H11AO75152 810 aaKnown RBP eCLIP9.87□□□□□ -0.83
SF3A3-201ENST00000373019 MED24O75448 989 aa9.87□□□□□ -0.83
SF3A3-201ENST00000373019 KRT34O76011 436 aa9.87□□□□□ -0.83
SF3A3-201ENST00000373019 TPPPO94811 219 aa9.87□□□□□ -0.83
SF3A3-201ENST00000373019 S100BP04271 92 aaPredicted RBP9.87□□□□□ -0.83
SF3A3-201ENST00000373019 P4HA1P13674 534 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms