RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 AKAP10O43572 662 aa9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 PSTPIP1O43586 416 aa9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 ATP5HO75947 161 aa9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 RECQL4O94761 1208 aa9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 USP17L7P0C7H9 530 aa9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 ERVK-10P10266 1014 aa9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 STIP1P31948 543 aaKnown RBP9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 RECQLP46063 649 aaPredicted RBP9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 AUHQ13825 339 aaKnown RBP9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 CSHL1Q14406 222 aa9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 GPR152Q8TDT2 470 aa9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 INPP5DQ92835 1189 aa9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 TMEM120AQ9BXJ8 343 aa9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 MID2Q9UJV3 735 aa9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 UBQLN1Q9UMX0 589 aaKnown RBP9.41□□□□□ -0.9
SMARCA1-202ENST00000371122 IQCA1LA6NCM1 817 aa9.4□□□□□ -0.9
SMARCA1-202ENST00000371122 SPRP35270 261 aaPredicted RBP9.4□□□□□ -0.9
SMARCA1-202ENST00000371122 PDAP1Q13442 181 aaKnown RBP9.4□□□□□ -0.9
SMARCA1-202ENST00000371122 FASTKD3Q14CZ7 662 aaKnown RBP9.4□□□□□ -0.9
SMARCA1-202ENST00000371122 CNGA3Q16281 694 aa9.4□□□□□ -0.9
SMARCA1-202ENST00000371122 CRY2Q49AN0 593 aa9.4□□□□□ -0.9
SMARCA1-202ENST00000371122 ANKRD20A4Q4UJ75 823 aa9.4□□□□□ -0.9
SMARCA1-202ENST00000371122 ANKRD20A8PQ5CZ79 823 aa9.4□□□□□ -0.9
SMARCA1-202ENST00000371122 TCHHL1Q5QJ38 904 aaPredicted RBP9.4□□□□□ -0.9
SMARCA1-202ENST00000371122 ANKRD20A2Q5SQ80 823 aa9.4□□□□□ -0.9
SMARCA1-202ENST00000371122 ANKRD20A1Q5TYW2 823 aa9.4□□□□□ -0.9
SMARCA1-202ENST00000371122 DIS3LQ8TF46 1054 aaKnown RBP9.4□□□□□ -0.9
SMARCA1-202ENST00000371122 NSL1Q96IY1 281 aa9.4□□□□□ -0.9
SMARCA1-202ENST00000371122 MECRQ9BV79 373 aa9.4□□□□□ -0.9
SMARCA1-202ENST00000371122 CXorf56Q9H5V9 222 aa9.4□□□□□ -0.9
SMARCA1-202ENST00000371122 GRID1Q9ULK0 1009 aa9.4□□□□□ -0.9
SMARCA1-202ENST00000371122 A0A0A6YYK5 440 aaPredicted RBP9.4□□□□□ -0.9
SMARCA1-202ENST00000371122 NDUFS3O75489 264 aa9.4□□□□□ -0.9
SMARCA1-202ENST00000371122 BDNFP23560 247 aa9.4□□□□□ -0.9
SMARCA1-202ENST00000371122 RPS12P25398 132 aaKnown RBP9.4□□□□□ -0.9
SMARCA1-202ENST00000371122 SERPINB4P48594 390 aa9.4□□□□□ -0.9
SMARCA1-202ENST00000371122 ESRRGP62508 458 aa9.4□□□□□ -0.9
SMARCA1-202ENST00000371122 ZRANB3Q5FWF4 1079 aa9.4□□□□□ -0.9
SMARCA1-202ENST00000371122 EFHC1Q5JVL4 640 aa9.4□□□□□ -0.9
SMARCA1-202ENST00000371122 TTC39BQ5VTQ0 682 aaPredicted RBP9.4□□□□□ -0.9
SMARCA1-202ENST00000371122 DEFB128Q7Z7B8 93 aa9.4□□□□□ -0.9
SMARCA1-202ENST00000371122 WDR49Q8IV35 697 aa9.4□□□□□ -0.9
SMARCA1-202ENST00000371122 FAM71AQ8IYT1 594 aa9.4□□□□□ -0.9
SMARCA1-202ENST00000371122 ST13P4Q8IZP2 240 aaPredicted RBP9.4□□□□□ -0.9
SMARCA1-202ENST00000371122 SHCBP1Q8NEM2 672 aa9.4□□□□□ -0.9
SMARCA1-202ENST00000371122 DNAJC9Q8WXX5 260 aa9.4□□□□□ -0.9
SMARCA1-202ENST00000371122 SHC3Q92529 594 aa9.4□□□□□ -0.9
SMARCA1-202ENST00000371122 EME1Q96AY2 570 aa9.4□□□□□ -0.9
SMARCA1-202ENST00000371122 MARK4Q96L34 752 aa9.4□□□□□ -0.9
SMARCA1-202ENST00000371122 LGMNQ99538 433 aa9.4□□□□□ -0.9
SMARCA1-202ENST00000371122 NT5MQ9NPB1 228 aa9.4□□□□□ -0.9
SMARCA1-202ENST00000371122 MAN1C1Q9NR34 630 aa9.4□□□□□ -0.9
SMARCA1-202ENST00000371122 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.4□□□□□ -0.9
SMARCA1-202ENST00000371122 WHRNQ9P202 907 aa9.4□□□□□ -0.9
SMARCA1-202ENST00000371122 RUVBL2Q9Y230 463 aaKnown RBP9.4□□□□□ -0.9
SMARCA1-202ENST00000371122 CNTNAP2Q9UHC6 1331 aa9.4□□□□□ -0.91
SMARCA1-202ENST00000371122 PRRG1O14668 218 aa9.4□□□□□ -0.91
SMARCA1-202ENST00000371122 CD4P01730 458 aa9.4□□□□□ -0.91
SMARCA1-202ENST00000371122 KCNA3P22001 575 aa9.4□□□□□ -0.91
SMARCA1-202ENST00000371122 PRKCIP41743 596 aa9.4□□□□□ -0.91
SMARCA1-202ENST00000371122 GCNT1Q02742 428 aa9.4□□□□□ -0.91
SMARCA1-202ENST00000371122 ERMARDQ5T6L9 678 aa9.4□□□□□ -0.91
SMARCA1-202ENST00000371122 RNF219Q5W0B1 726 aaPredicted RBP9.4□□□□□ -0.91
SMARCA1-202ENST00000371122 IYDQ6PHW0 289 aa9.4□□□□□ -0.91
SMARCA1-202ENST00000371122 BRSK2Q8IWQ3 736 aa9.4□□□□□ -0.91
SMARCA1-202ENST00000371122 URGCPQ8TCY9 931 aa9.4□□□□□ -0.91
SMARCA1-202ENST00000371122 LPIN3Q9BQK8 851 aa9.4□□□□□ -0.91
SMARCA1-202ENST00000371122 MYH10P35580 1976 aa9.39□□□□□ -0.91
SMARCA1-202ENST00000371122 SUPT3HB4E1H0 165 aa9.39□□□□□ -0.91
SMARCA1-202ENST00000371122 ACKR2O00590 384 aa9.39□□□□□ -0.91
SMARCA1-202ENST00000371122 DNALI1O14645 258 aaPredicted RBP9.39□□□□□ -0.91
SMARCA1-202ENST00000371122 SMNDC1O75940 238 aaKnown RBP eCLIP9.39□□□□□ -0.91
SMARCA1-202ENST00000371122 FAM155BO75949 473 aa9.39□□□□□ -0.91
SMARCA1-202ENST00000371122 VAPBO95292 243 aa9.39□□□□□ -0.91
SMARCA1-202ENST00000371122 RASA2Q15283 850 aa9.39□□□□□ -0.91
SMARCA1-202ENST00000371122 TAF5Q15542 800 aa9.39□□□□□ -0.91
SMARCA1-202ENST00000371122 EXOC3L1Q86VI1 746 aa9.39□□□□□ -0.91
SMARCA1-202ENST00000371122 HS6ST3Q8IZP7 471 aa9.39□□□□□ -0.91
SMARCA1-202ENST00000371122 PPHLN1Q8NEY8 458 aaKnown RBP9.39□□□□□ -0.91
SMARCA1-202ENST00000371122 SERPIND1P05546 499 aa9.39□□□□□ -0.91
SMARCA1-202ENST00000371122 GTF2BQ00403 316 aa9.39□□□□□ -0.91
SMARCA1-202ENST00000371122 SV2CQ496J9 727 aa9.39□□□□□ -0.91
SMARCA1-202ENST00000371122 N4BP2L1Q5TBK1 243 aaPredicted RBP9.39□□□□□ -0.91
SMARCA1-202ENST00000371122 WSCD1Q658N2 575 aa9.39□□□□□ -0.91
SMARCA1-202ENST00000371122 XRRA1Q6P2D8 792 aa9.39□□□□□ -0.91
SMARCA1-202ENST00000371122 UNC45BQ8IWX7 931 aa9.39□□□□□ -0.91
SMARCA1-202ENST00000371122 RDM1Q8NG50 284 aa9.39□□□□□ -0.91
SMARCA1-202ENST00000371122 SNX19Q92543 992 aa9.39□□□□□ -0.91
SMARCA1-202ENST00000371122 PARK7Q99497 189 aaKnown RBP9.39□□□□□ -0.91
SMARCA1-202ENST00000371122 PORCNQ9H237 461 aa9.39□□□□□ -0.91
SMARCA1-202ENST00000371122 RBM22Q9NW64 420 aaKnown RBP eCLIP9.39□□□□□ -0.916e-11■■□□□ 11.6
SMARCA1-202ENST00000371122 LMCD1Q9NZU5 365 aa9.39□□□□□ -0.91
SMARCA1-202ENST00000371122 UBIAD1Q9Y5Z9 338 aa9.39□□□□□ -0.91
SMARCA1-202ENST00000371122 FAM237BA0A1B0GVD1 139 aa9.39□□□□□ -0.91
SMARCA1-202ENST00000371122 ESRRBO95718 433 aa9.39□□□□□ -0.91
SMARCA1-202ENST00000371122 CFHP08603 1231 aa9.39□□□□□ -0.91
SMARCA1-202ENST00000371122 CETPP11597 493 aa9.39□□□□□ -0.91
SMARCA1-202ENST00000371122 PCSK1P29120 753 aa9.39□□□□□ -0.91
SMARCA1-202ENST00000371122 RPL22P35268 128 aaKnown RBP9.39□□□□□ -0.91
SMARCA1-202ENST00000371122 NBPF20Q3BBV1 942 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms