RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 COPEO14579 308 aa12.09□□□□□ -0.47
SMARCA1-201ENST00000371121 RGL2O15211 777 aa12.09□□□□□ -0.47
SMARCA1-201ENST00000371121 VIL1P09327 827 aaKnown RBP12.09□□□□□ -0.47
SMARCA1-201ENST00000371121 INHBBP09529 407 aa12.09□□□□□ -0.47
SMARCA1-201ENST00000371121 WEE2P0C1S8 567 aa12.09□□□□□ -0.47
SMARCA1-201ENST00000371121 ALOX15P16050 662 aaPredicted RBP12.09□□□□□ -0.47
SMARCA1-201ENST00000371121 SERPINB8P50452 374 aa12.09□□□□□ -0.47
SMARCA1-201ENST00000371121 POTEHQ6S545 545 aa12.09□□□□□ -0.47
SMARCA1-201ENST00000371121 TRIM72Q6ZMU5 477 aa12.09□□□□□ -0.47
SMARCA1-201ENST00000371121 UNC5BQ8IZJ1 945 aa12.09□□□□□ -0.47
SMARCA1-201ENST00000371121 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.09□□□□□ -0.474e-22■□□□□ 10.7
SMARCA1-201ENST00000371121 IL31RAQ8NI17 732 aa12.09□□□□□ -0.47
SMARCA1-201ENST00000371121 MAPK15Q8TD08 544 aa12.09□□□□□ -0.47
SMARCA1-201ENST00000371121 PRPF31Q8WWY3 499 aaKnown RBP12.09□□□□□ -0.47
SMARCA1-201ENST00000371121 PKP2Q99959 881 aa12.09□□□□□ -0.47
SMARCA1-201ENST00000371121 PFDN4Q9NQP4 134 aa12.09□□□□□ -0.47
SMARCA1-201ENST00000371121 NARFQ9UHQ1 456 aa12.09□□□□□ -0.47
SMARCA1-201ENST00000371121 RAB26Q9ULW5 256 aa12.09□□□□□ -0.47
SMARCA1-201ENST00000371121 IQANK1A0A1B0GTG1 560 aa12.09□□□□□ -0.47
SMARCA1-201ENST00000371121 ARHGEF35A5YM69 484 aa12.09□□□□□ -0.47
SMARCA1-201ENST00000371121 C4BPAP04003 597 aaKnown RBP12.09□□□□□ -0.47
SMARCA1-201ENST00000371121 NELFEP18615 380 aaKnown RBP12.09□□□□□ -0.47
SMARCA1-201ENST00000371121 TBCCQ15814 346 aa12.09□□□□□ -0.47
SMARCA1-201ENST00000371121 CEP55Q53EZ4 464 aa12.09□□□□□ -0.47
SMARCA1-201ENST00000371121 C16orf46Q6P387 395 aa12.09□□□□□ -0.47
SMARCA1-201ENST00000371121 NPNTQ6UXI9 565 aa12.09□□□□□ -0.47
SMARCA1-201ENST00000371121 STXBP4Q6ZWJ1 553 aa12.09□□□□□ -0.47
SMARCA1-201ENST00000371121 CYP4V2Q6ZWL3 525 aaPredicted RBP12.09□□□□□ -0.47
SMARCA1-201ENST00000371121 MAP4K3Q8IVH8 894 aa12.09□□□□□ -0.47
SMARCA1-201ENST00000371121 PALM2Q8IXS6 379 aa12.09□□□□□ -0.47
SMARCA1-201ENST00000371121 MPP5Q8N3R9 675 aa12.09□□□□□ -0.47
SMARCA1-201ENST00000371121 UBR7Q8N806 425 aa12.09□□□□□ -0.47
SMARCA1-201ENST00000371121 LRRN4Q8WUT4 740 aa12.09□□□□□ -0.47
SMARCA1-201ENST00000371121 ZNF577Q9BSK1 485 aa12.09□□□□□ -0.47
SMARCA1-201ENST00000371121 EBF1Q9UH73 591 aa12.09□□□□□ -0.47
SMARCA1-201ENST00000371121 CROCCQ5TZA2 2017 aa12.09□□□□□ -0.47
SMARCA1-201ENST00000371121 CCR3P51677 355 aa12.09□□□□□ -0.47
SMARCA1-201ENST00000371121 COPAP53621 1224 aa12.09□□□□□ -0.47
SMARCA1-201ENST00000371121 PPIDQ08752 370 aaKnown RBP12.09□□□□□ -0.47
SMARCA1-201ENST00000371121 PCLAFQ15004 111 aa12.09□□□□□ -0.47
SMARCA1-201ENST00000371121 PPM1LQ5SGD2 360 aa12.09□□□□□ -0.47
SMARCA1-201ENST00000371121 LRRC38Q5VT99 294 aa12.09□□□□□ -0.47
SMARCA1-201ENST00000371121 CC2D2BQ6DHV5 1058 aa12.09□□□□□ -0.47
SMARCA1-201ENST00000371121 SLC26A11Q86WA9 606 aa12.09□□□□□ -0.47
SMARCA1-201ENST00000371121 ZNF677Q86XU0 584 aa12.09□□□□□ -0.47
SMARCA1-201ENST00000371121 PPP1R10Q96QC0 940 aaKnown RBP12.09□□□□□ -0.47
SMARCA1-201ENST00000371121 NEURL2Q9BR09 285 aa12.09□□□□□ -0.47
SMARCA1-201ENST00000371121 MAF1Q9H063 256 aa12.09□□□□□ -0.47
SMARCA1-201ENST00000371121 TBC1D22BQ9NU19 505 aa12.09□□□□□ -0.47
SMARCA1-201ENST00000371121 COL20A1Q9P218 1284 aa12.09□□□□□ -0.47
SMARCA1-201ENST00000371121 NYAP2Q9P242 653 aa12.09□□□□□ -0.47
SMARCA1-201ENST00000371121 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.09□□□□□ -0.47
SMARCA1-201ENST00000371121 CYTH4Q9UIA0 394 aa12.09□□□□□ -0.47
SMARCA1-201ENST00000371121 PSMD13Q9UNM6 376 aa12.09□□□□□ -0.47
SMARCA1-201ENST00000371121 LOC100653049A0A140TA62 436 aa12.08□□□□□ -0.48
SMARCA1-201ENST00000371121 KRT34O76011 436 aa12.08□□□□□ -0.48
SMARCA1-201ENST00000371121 UFL1O94874 794 aa12.08□□□□□ -0.48
SMARCA1-201ENST00000371121 ECE1P42892 770 aa12.08□□□□□ -0.48
SMARCA1-201ENST00000371121 ZNF132P52740 706 aa12.08□□□□□ -0.48
SMARCA1-201ENST00000371121 ERI1Q8IV48 349 aaKnown RBP12.08□□□□□ -0.48
SMARCA1-201ENST00000371121 JADE3Q92613 823 aa12.08□□□□□ -0.48
SMARCA1-201ENST00000371121 VCPIP1Q96JH7 1222 aa12.08□□□□□ -0.48
SMARCA1-201ENST00000371121 ZFRQ96KR1 1074 aaKnown RBP12.08□□□□□ -0.48
SMARCA1-201ENST00000371121 SIKE1Q9BRV8 207 aa12.08□□□□□ -0.48
SMARCA1-201ENST00000371121 OLAHQ9NV23 265 aa12.08□□□□□ -0.48
SMARCA1-201ENST00000371121 TBCCD1Q9NVR7 557 aa12.08□□□□□ -0.48
SMARCA1-201ENST00000371121 PRR12Q9ULL5 1215 aa12.08□□□□□ -0.48
SMARCA1-201ENST00000371121 ZNF638Q14966 1978 aaKnown RBP12.08□□□□□ -0.48
SMARCA1-201ENST00000371121 CNTNAP2Q9UHC6 1331 aa12.08□□□□□ -0.48
SMARCA1-201ENST00000371121 PRSS51A0A1B0GVH4 220 aa12.08□□□□□ -0.48
SMARCA1-201ENST00000371121 TRIM43BA6NCK2 446 aa12.08□□□□□ -0.48
SMARCA1-201ENST00000371121 IPO5O00410 1097 aaKnown RBP12.08□□□□□ -0.48
SMARCA1-201ENST00000371121 LRCH4O75427 683 aa12.08□□□□□ -0.48
SMARCA1-201ENST00000371121 XRCC1P18887 633 aaPredicted RBP12.08□□□□□ -0.48
SMARCA1-201ENST00000371121 SERPINB6P35237 376 aa12.08□□□□□ -0.48
SMARCA1-201ENST00000371121 TCF7P36402 384 aaPredicted RBP12.08□□□□□ -0.48
SMARCA1-201ENST00000371121 KCNC4Q03721 635 aa12.08□□□□□ -0.48
SMARCA1-201ENST00000371121 C1QBPQ07021 282 aaKnown RBP12.08□□□□□ -0.48
SMARCA1-201ENST00000371121 ADGRE1Q14246 886 aa12.08□□□□□ -0.48
SMARCA1-201ENST00000371121 ZNF423Q2M1K9 1284 aa12.08□□□□□ -0.48
SMARCA1-201ENST00000371121 SH2D4BQ5SQS7 431 aa12.08□□□□□ -0.48
SMARCA1-201ENST00000371121 TTC39BQ5VTQ0 682 aaPredicted RBP12.08□□□□□ -0.48
SMARCA1-201ENST00000371121 NUDCD3Q8IVD9 361 aa12.08□□□□□ -0.48
SMARCA1-201ENST00000371121 CCDC33Q8N5R6 958 aa12.08□□□□□ -0.48
SMARCA1-201ENST00000371121 PIWIL2Q8TC59 973 aaKnown RBP12.08□□□□□ -0.48
SMARCA1-201ENST00000371121 TMC2Q8TDI7 906 aa12.08□□□□□ -0.48
SMARCA1-201ENST00000371121 MOCOSQ96EN8 888 aa12.08□□□□□ -0.48
SMARCA1-201ENST00000371121 WDR11Q9BZH6 1224 aa12.08□□□□□ -0.48
SMARCA1-201ENST00000371121 INO80BQ9C086 356 aaPredicted RBP12.08□□□□□ -0.48
SMARCA1-201ENST00000371121 DNAJC16Q9Y2G8 782 aa12.08□□□□□ -0.48
SMARCA1-201ENST00000371121 NDC80O14777 642 aa12.08□□□□□ -0.48
SMARCA1-201ENST00000371121 CST8O60676 142 aa12.08□□□□□ -0.48
SMARCA1-201ENST00000371121 FUCA1P04066 466 aa12.08□□□□□ -0.48
SMARCA1-201ENST00000371121 ALDOAP04075 364 aaKnown RBP12.08□□□□□ -0.48
SMARCA1-201ENST00000371121 CD247P20963 164 aa12.08□□□□□ -0.48
SMARCA1-201ENST00000371121 ZNF76P36508 570 aa12.08□□□□□ -0.48
SMARCA1-201ENST00000371121 NPTX2P47972 431 aa12.08□□□□□ -0.48
SMARCA1-201ENST00000371121 SCNN1DP51172 638 aa12.08□□□□□ -0.48
SMARCA1-201ENST00000371121 THOP1P52888 689 aa12.08□□□□□ -0.48
SMARCA1-201ENST00000371121 RELAQ04206 551 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms