RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 CCDC113Q9H0I3 377 aa5.9□□□□□ -1.46
CD47-201ENST00000355354 SMYD3Q9H7B4 428 aa5.9□□□□□ -1.46
CD47-201ENST00000355354 AS3MTQ9HBK9 375 aa5.9□□□□□ -1.46
CD47-201ENST00000355354 NOD2Q9HC29 1040 aa5.9□□□□□ -1.46
CD47-201ENST00000355354 CXXC1Q9P0U4 656 aaPredicted RBP5.9□□□□□ -1.46
CD47-201ENST00000355354 PNMA6FA0A0J9YX94 578 aa5.9□□□□□ -1.47
CD47-201ENST00000355354 LOC100653049A0A140TA62 436 aa5.9□□□□□ -1.47
CD47-201ENST00000355354 FAM149AA5PLN7 773 aa5.9□□□□□ -1.47
CD47-201ENST00000355354 KRT34O76011 436 aa5.9□□□□□ -1.47
CD47-201ENST00000355354 TTLL1O95922 423 aa5.9□□□□□ -1.47
CD47-201ENST00000355354 IFNB1P01574 187 aa5.9□□□□□ -1.47
CD47-201ENST00000355354 KCNA2P16389 499 aa5.9□□□□□ -1.47
CD47-201ENST00000355354 SP100P23497 879 aaPredicted RBP5.9□□□□□ -1.47
CD47-201ENST00000355354 KLRC2P26717 231 aa5.9□□□□□ -1.47
CD47-201ENST00000355354 CALML3P27482 149 aa5.9□□□□□ -1.47
CD47-201ENST00000355354 SERPINB3P29508 390 aa5.9□□□□□ -1.47
CD47-201ENST00000355354 RGS7P49802 495 aa5.9□□□□□ -1.47
CD47-201ENST00000355354 ACLYP53396 1101 aa5.9□□□□□ -1.47
CD47-201ENST00000355354 IGBP1P78318 339 aa5.9□□□□□ -1.47
CD47-201ENST00000355354 XRCC4Q13426 336 aa5.9□□□□□ -1.47
CD47-201ENST00000355354 ARHGEF6Q15052 776 aa5.9□□□□□ -1.47
CD47-201ENST00000355354 PCSK7Q16549 785 aa5.9□□□□□ -1.47
CD47-201ENST00000355354 OR52E8Q6IFG1 317 aa5.9□□□□□ -1.47
CD47-201ENST00000355354 CFAP57Q96MR6 1250 aa5.9□□□□□ -1.47
CD47-201ENST00000355354 TUBGCP5Q96RT8 1024 aa5.9□□□□□ -1.47
CD47-201ENST00000355354 WDR70Q9NW82 654 aa5.9□□□□□ -1.47
CD47-201ENST00000355354 CYP39A1Q9NYL5 469 aa5.9□□□□□ -1.47
CD47-201ENST00000355354 IKZF3Q9UKT9 509 aa5.9□□□□□ -1.47
CD47-201ENST00000355354 IGSF10Q6WRI0 2623 aa5.9□□□□□ -1.47
CD47-201ENST00000355354 C5orf60A6NFR6 353 aa5.9□□□□□ -1.47
CD47-201ENST00000355354 ZNF195O14628 629 aa5.9□□□□□ -1.47
CD47-201ENST00000355354 PRSS23O95084 383 aa5.9□□□□□ -1.47
CD47-201ENST00000355354 ALDOAP04075 364 aaKnown RBP5.9□□□□□ -1.47
CD47-201ENST00000355354 CHRNGP07510 517 aa5.9□□□□□ -1.47
CD47-201ENST00000355354 KITP10721 976 aa5.9□□□□□ -1.47
CD47-201ENST00000355354 MYCLP12524 364 aaPredicted RBP5.9□□□□□ -1.47
CD47-201ENST00000355354 CHRNA4P43681 627 aa5.9□□□□□ -1.47
CD47-201ENST00000355354 HSD17B4P51659 736 aa5.9□□□□□ -1.47
CD47-201ENST00000355354 CCL23P55773 120 aa5.9□□□□□ -1.47
CD47-201ENST00000355354 MARSP56192 900 aaKnown RBP5.9□□□□□ -1.47
CD47-201ENST00000355354 NR1H3Q13133 447 aa5.9□□□□□ -1.47
CD47-201ENST00000355354 CAMK1Q14012 370 aa5.9□□□□□ -1.47
CD47-201ENST00000355354 TBC1D25Q3MII6 688 aa5.9□□□□□ -1.47
CD47-201ENST00000355354 PPP1R15BQ5SWA1 713 aa5.9□□□□□ -1.47
CD47-201ENST00000355354 SWSAP1Q6NVH7 229 aa5.9□□□□□ -1.47
CD47-201ENST00000355354 PMF1Q6P1K2 205 aa5.9□□□□□ -1.47
CD47-201ENST00000355354 SV2BQ7L1I2 683 aa5.9□□□□□ -1.47
CD47-201ENST00000355354 DEFB123Q8N688 67 aa5.9□□□□□ -1.47
CD47-201ENST00000355354 ZNF689Q96CS4 500 aaPredicted RBP5.9□□□□□ -1.47
CD47-201ENST00000355354 OXNAD1Q96HP4 312 aaPredicted RBP5.9□□□□□ -1.47
CD47-201ENST00000355354 FEM1CQ96JP0 617 aa5.9□□□□□ -1.47
CD47-201ENST00000355354 TMEM209Q96SK2 561 aa5.9□□□□□ -1.47
CD47-201ENST00000355354 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.9□□□□□ -1.47
CD47-201ENST00000355354 WDR55Q9H6Y2 383 aaPredicted RBP5.9□□□□□ -1.47
CD47-201ENST00000355354 MCM8Q9UJA3 840 aa5.9□□□□□ -1.47
CD47-201ENST00000355354 GINS2Q9Y248 185 aa5.9□□□□□ -1.47
CD47-201ENST00000355354 SETXQ7Z333 2677 aaKnown RBP5.89□□□□□ -1.47
CD47-201ENST00000355354 ZSCAN12O43309 604 aa5.89□□□□□ -1.47
CD47-201ENST00000355354 SSTR4P31391 388 aa5.89□□□□□ -1.47
CD47-201ENST00000355354 PBX2P40425 430 aa5.89□□□□□ -1.47
CD47-201ENST00000355354 EMC10Q5UCC4 262 aa5.89□□□□□ -1.47
CD47-201ENST00000355354 MTDHQ86UE4 582 aaKnown RBP5.89□□□□□ -1.47
CD47-201ENST00000355354 ZNF598Q86UK7 904 aaKnown RBP5.89□□□□□ -1.47
CD47-201ENST00000355354 FAM186BQ8IYM0 893 aa5.89□□□□□ -1.47
CD47-201ENST00000355354 C7orf61Q8IZ16 206 aa5.89□□□□□ -1.47
CD47-201ENST00000355354 CCDC110Q8TBZ0 833 aa5.89□□□□□ -1.47
CD47-201ENST00000355354 BADQ92934 168 aa5.89□□□□□ -1.47
CD47-201ENST00000355354 ERP27Q96DN0 273 aa5.89□□□□□ -1.47
CD47-201ENST00000355354 CNTN3Q9P232 1028 aa5.89□□□□□ -1.47
CD47-201ENST00000355354 ADAMTS6Q9UKP5 1117 aa5.89□□□□□ -1.47
CD47-201ENST00000355354 MTCH2Q9Y6C9 303 aa5.89□□□□□ -1.47
CD47-201ENST00000355354 ERLIN2O94905 339 aa5.89□□□□□ -1.47
CD47-201ENST00000355354 SLC25A27O95847 323 aa5.89□□□□□ -1.47
CD47-201ENST00000355354 NFICP08651 508 aa5.89□□□□□ -1.47
CD47-201ENST00000355354 DLDP09622 509 aaKnown RBP5.89□□□□□ -1.47
CD47-201ENST00000355354 CHRM1P11229 460 aaPredicted RBP5.89□□□□□ -1.47
CD47-201ENST00000355354 SMPD1P17405 629 aa5.89□□□□□ -1.47
CD47-201ENST00000355354 SLC19A1P41440 591 aa5.89□□□□□ -1.47
CD47-201ENST00000355354 MNAT1P51948 309 aa5.89□□□□□ -1.47
CD47-201ENST00000355354 CDKL1Q00532 357 aa5.89□□□□□ -1.47
CD47-201ENST00000355354 PURAQ00577 322 aaKnown RBP5.89□□□□□ -1.47
CD47-201ENST00000355354 MESP2Q0VG99 397 aa5.89□□□□□ -1.47
CD47-201ENST00000355354 PPP1R7Q15435 360 aa5.89□□□□□ -1.47
CD47-201ENST00000355354 SYPL2Q5VXT5 272 aa5.89□□□□□ -1.47
CD47-201ENST00000355354 CDCA2Q69YH5 1023 aaPredicted RBP5.89□□□□□ -1.47
CD47-201ENST00000355354 KDELC2Q7Z4H8 507 aa5.89□□□□□ -1.47
CD47-201ENST00000355354 N4BP2L2Q92802 583 aaPredicted RBP5.89□□□□□ -1.47
CD47-201ENST00000355354 DHTKD1Q96HY7 919 aaPredicted RBP5.89□□□□□ -1.47
CD47-201ENST00000355354 SEZ6LQ9BYH1 1024 aa5.89□□□□□ -1.47
CD47-201ENST00000355354 NACAP1Q9BZK3 213 aa5.89□□□□□ -1.47
CD47-201ENST00000355354 PABPC3Q9H361 631 aaKnown RBP5.89□□□□□ -1.47
CD47-201ENST00000355354 ANAPC7Q9UJX3 599 aa5.89□□□□□ -1.47
CD47-201ENST00000355354 POC1B-GALNT4F8VUJ3 575 aa5.89□□□□□ -1.47
CD47-201ENST00000355354 RFC5P40937 340 aa5.89□□□□□ -1.47
CD47-201ENST00000355354 IRF9Q00978 393 aa5.89□□□□□ -1.47
CD47-201ENST00000355354 PPP1R3AQ16821 1122 aa5.89□□□□□ -1.47
CD47-201ENST00000355354 LRCH2Q5VUJ6 765 aa5.89□□□□□ -1.47
CD47-201ENST00000355354 PADI6Q6TGC4 694 aa5.89□□□□□ -1.47
CD47-201ENST00000355354 GADL1Q6ZQY3 521 aa5.89□□□□□ -1.47
CD47-201ENST00000355354 DENND5BQ6ZUT9 1274 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms