RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 MARK2Q7KZI7 788 aaKnown RBP16.86■□□□□ 0.29
PTCH1-201ENST00000331920 TMEM47Q9BQJ4 181 aa16.86■□□□□ 0.29
PTCH1-201ENST00000331920 MARK1Q9P0L2 795 aa16.86■□□□□ 0.29
PTCH1-201ENST00000331920 SHOC2Q9UQ13 582 aa16.86■□□□□ 0.29
PTCH1-201ENST00000331920 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.85■□□□□ 0.29
PTCH1-201ENST00000331920 NPTXRO95502 500 aa16.85■□□□□ 0.29
PTCH1-201ENST00000331920 EFNA5P52803 228 aa16.85■□□□□ 0.29
PTCH1-201ENST00000331920 PRKAA1Q13131 559 aa16.85■□□□□ 0.29
PTCH1-201ENST00000331920 FAM220AQ7Z4H9 259 aa16.85■□□□□ 0.29
PTCH1-201ENST00000331920 SAMD3Q8N6K7 520 aa16.85■□□□□ 0.29
PTCH1-201ENST00000331920 PCDHA10Q9Y5I2 948 aa16.85■□□□□ 0.29
PTCH1-201ENST00000331920 DGCR6Q14129 220 aa16.85■□□□□ 0.29
PTCH1-201ENST00000331920 SUGP1Q8IWZ8 645 aaKnown RBP16.85■□□□□ 0.29
PTCH1-201ENST00000331920 CCDC115Q96NT0 180 aa16.85■□□□□ 0.29
PTCH1-201ENST00000331920 EPB41L4BQ9H329 900 aa16.85■□□□□ 0.29
PTCH1-201ENST00000331920 GPC6Q9Y625 555 aaPredicted RBP16.85■□□□□ 0.29
PTCH1-201ENST00000331920 ATP5F1P24539 256 aaPredicted RBP16.85■□□□□ 0.29
PTCH1-201ENST00000331920 GRB14Q14449 540 aa16.85■□□□□ 0.29
PTCH1-201ENST00000331920 ATG14Q6ZNE5 492 aa16.85■□□□□ 0.29
PTCH1-201ENST00000331920 GALNTL5Q7Z4T8 443 aa16.85■□□□□ 0.29
PTCH1-201ENST00000331920 VPS33BQ9H267 617 aa16.85■□□□□ 0.29
PTCH1-201ENST00000331920 PHTF1Q9UMS5 762 aa16.85■□□□□ 0.29
PTCH1-201ENST00000331920 THRAP10827 490 aa16.85■□□□□ 0.29
PTCH1-201ENST00000331920 ACADSP16219 412 aa16.85■□□□□ 0.29
PTCH1-201ENST00000331920 FAM98BQ52LJ0 330 aaKnown RBP16.85■□□□□ 0.29
PTCH1-201ENST00000331920 KLHL32Q96NJ5 620 aa16.85■□□□□ 0.29
PTCH1-201ENST00000331920 DKK3Q9UBP4 350 aa16.85■□□□□ 0.29
PTCH1-201ENST00000331920 DUOX2Q9NRD8 1548 aa16.85■□□□□ 0.29
PTCH1-201ENST00000331920 RAB2AP61019 212 aa16.85■□□□□ 0.29
PTCH1-201ENST00000331920 EPC2Q52LR7 807 aa16.85■□□□□ 0.29
PTCH1-201ENST00000331920 DOK6Q6PKX4 331 aa16.85■□□□□ 0.29
PTCH1-201ENST00000331920 COA1Q9GZY4 146 aa16.85■□□□□ 0.29
PTCH1-201ENST00000331920 MSH3P20585 1137 aa16.85■□□□□ 0.29
PTCH1-201ENST00000331920 SNRNP35Q16560 246 aaKnown RBP16.85■□□□□ 0.29
PTCH1-201ENST00000331920 CYB5R4Q7L1T6 521 aa16.85■□□□□ 0.29
PTCH1-201ENST00000331920 ATP8B4Q8TF62 1192 aa16.85■□□□□ 0.29
PTCH1-201ENST00000331920 HASPINQ8TF76 798 aa16.85■□□□□ 0.29
PTCH1-201ENST00000331920 RORBQ92753 470 aa16.85■□□□□ 0.29
PTCH1-201ENST00000331920 SLAIN2Q9P270 581 aa16.85■□□□□ 0.29
PTCH1-201ENST00000331920 ZNF432O94892 652 aa16.84■□□□□ 0.29
PTCH1-201ENST00000331920 RAPSNQ13702 412 aa16.84■□□□□ 0.29
PTCH1-201ENST00000331920 PPIL6Q8IXY8 311 aa16.84■□□□□ 0.29
PTCH1-201ENST00000331920 CCDC182A6NF36 153 aa16.84■□□□□ 0.29
PTCH1-201ENST00000331920 CCDC154A6NI56 674 aa16.84■□□□□ 0.29
PTCH1-201ENST00000331920 A8MX80 341 aa16.84■□□□□ 0.29
PTCH1-201ENST00000331920 ANXA9O76027 345 aa16.84■□□□□ 0.29
PTCH1-201ENST00000331920 CCDC166P0CW27 439 aa16.84■□□□□ 0.29
PTCH1-201ENST00000331920 ACADLP28330 430 aa16.84■□□□□ 0.29
PTCH1-201ENST00000331920 TGFBR2P37173 567 aa16.84■□□□□ 0.29
PTCH1-201ENST00000331920 MTAPQ13126 283 aa16.84■□□□□ 0.29
PTCH1-201ENST00000331920 SMCO1Q147U7 214 aa16.84■□□□□ 0.29
PTCH1-201ENST00000331920 MSANTD1Q6ZTZ1 278 aa16.84■□□□□ 0.29
PTCH1-201ENST00000331920 PTAR1Q7Z6K3 402 aaPredicted RBP16.84■□□□□ 0.29
PTCH1-201ENST00000331920 PARP8Q8N3A8 854 aa16.84■□□□□ 0.29
PTCH1-201ENST00000331920 SLC38A7Q9NVC3 462 aa16.84■□□□□ 0.29
PTCH1-201ENST00000331920 FAM50BQ9Y247 325 aa16.84■□□□□ 0.29
PTCH1-201ENST00000331920 PHGDHO43175 533 aaKnown RBP16.84■□□□□ 0.29
PTCH1-201ENST00000331920 RAD51CO43502 376 aa16.84■□□□□ 0.29
PTCH1-201ENST00000331920 PDPK2PQ6A1A2 396 aa16.84■□□□□ 0.29
PTCH1-201ENST00000331920 DNAJC14Q6Y2X3 702 aaPredicted RBP16.84■□□□□ 0.29
PTCH1-201ENST00000331920 UCMAQ8WVF2 138 aa16.84■□□□□ 0.29
PTCH1-201ENST00000331920 ZNF879B4DU55 563 aa16.84■□□□□ 0.29
PTCH1-201ENST00000331920 F8VZ95 297 aa16.84■□□□□ 0.29
PTCH1-201ENST00000331920 MGRN1O60291 552 aa16.84■□□□□ 0.29
PTCH1-201ENST00000331920 C21orf59P57076 290 aa16.84■□□□□ 0.29
PTCH1-201ENST00000331920 SLC29A2Q14542 456 aa16.84■□□□□ 0.29
PTCH1-201ENST00000331920 STRA8Q7Z7C7 330 aa16.84■□□□□ 0.29
PTCH1-201ENST00000331920 CHP1Q99653 195 aa16.84■□□□□ 0.29
PTCH1-201ENST00000331920 APOL2Q9BQE5 337 aa16.84■□□□□ 0.29
PTCH1-201ENST00000331920 DDIT4Q9NX09 232 aa16.84■□□□□ 0.29
PTCH1-201ENST00000331920 LIMD1Q9UGP4 676 aa16.84■□□□□ 0.29
PTCH1-201ENST00000331920 KAT6AQ92794 2004 aa16.84■□□□□ 0.29
PTCH1-201ENST00000331920 STX16-NPEPL1H3BU86 382 aa16.84■□□□□ 0.29
PTCH1-201ENST00000331920 STX16O14662 325 aa16.84■□□□□ 0.29
PTCH1-201ENST00000331920 BRINP3Q76B58 766 aa16.84■□□□□ 0.29
PTCH1-201ENST00000331920 UBP1Q9NZI7 540 aa16.84■□□□□ 0.29
PTCH1-201ENST00000331920 MRPL42Q9Y6G3 142 aaKnown RBP16.84■□□□□ 0.29
PTCH1-201ENST00000331920 PIK3C2GO75747 1445 aa16.84■□□□□ 0.29
PTCH1-201ENST00000331920 ACADSBP45954 432 aa16.84■□□□□ 0.29
PTCH1-201ENST00000331920 SEC24CP53992 1094 aa16.84■□□□□ 0.29
PTCH1-201ENST00000331920 GALCP54803 685 aa16.84■□□□□ 0.29
PTCH1-201ENST00000331920 SMU1Q2TAY7 513 aa16.84■□□□□ 0.29
PTCH1-201ENST00000331920 ACTR8Q9H981 624 aa16.84■□□□□ 0.29
PTCH1-201ENST00000331920 RPAP1Q9BWH6 1393 aaPredicted RBP16.84■□□□□ 0.29
PTCH1-201ENST00000331920 DCTN2Q13561 401 aaKnown RBP16.83■□□□□ 0.29
PTCH1-201ENST00000331920 GLRA4Q5JXX5 417 aa16.83■□□□□ 0.29
PTCH1-201ENST00000331920 HPDLQ96IR7 371 aa16.83■□□□□ 0.29
PTCH1-201ENST00000331920 WDR24Q96S15 920 aa16.83■□□□□ 0.29
PTCH1-201ENST00000331920 SNX12Q9UMY4 172 aa16.83■□□□□ 0.29
PTCH1-201ENST00000331920 TSPOAP1O95153 1857 aa16.83■□□□□ 0.29
PTCH1-201ENST00000331920 RAD51BO15315 384 aa16.83■□□□□ 0.29
PTCH1-201ENST00000331920 HSD17B3P37058 310 aa16.83■□□□□ 0.29
PTCH1-201ENST00000331920 ITGB3BPQ13352 177 aaPredicted RBP16.83■□□□□ 0.29
PTCH1-201ENST00000331920 IZUMO2Q6UXV1 221 aa16.83■□□□□ 0.29
PTCH1-201ENST00000331920 AGMOQ6ZNB7 445 aa16.83■□□□□ 0.29
PTCH1-201ENST00000331920 ZNF605Q86T29 641 aa16.83■□□□□ 0.29
PTCH1-201ENST00000331920 SH3D21A4FU49 640 aa16.83■□□□□ 0.29
PTCH1-201ENST00000331920 FOXP2O15409 715 aa16.83■□□□□ 0.29
PTCH1-201ENST00000331920 KBTBD2Q8IY47 623 aa16.83■□□□□ 0.29
PTCH1-201ENST00000331920 MYOM2P54296 1465 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms