RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 XPO6Q96QU8 1125 aaKnown RBP18.65■□□□□ 0.58
HDDC3-201ENST00000330334 DUSP15Q9H1R2 295 aaPredicted RBP18.65■□□□□ 0.58
HDDC3-201ENST00000330334 ARRDC1-AS1Q9H2J1 176 aa18.65■□□□□ 0.58
HDDC3-201ENST00000330334 SPAG17Q6Q759 2223 aa18.64■□□□□ 0.57
HDDC3-201ENST00000330334 ANTXRLA6NF34 631 aa18.64■□□□□ 0.57
HDDC3-201ENST00000330334 SGK1O00141 431 aa18.64■□□□□ 0.57
HDDC3-201ENST00000330334 XPO1O14980 1071 aaKnown RBP18.64■□□□□ 0.57
HDDC3-201ENST00000330334 STC2O76061 302 aa18.64■□□□□ 0.57
HDDC3-201ENST00000330334 KLF8O95600 359 aaPredicted RBP18.64■□□□□ 0.57
HDDC3-201ENST00000330334 VDRP11473 427 aa18.64■□□□□ 0.57
HDDC3-201ENST00000330334 TIE1P35590 1138 aa18.64■□□□□ 0.57
HDDC3-201ENST00000330334 BCAT1P54687 386 aa18.64■□□□□ 0.57
HDDC3-201ENST00000330334 CETN1Q12798 172 aa18.64■□□□□ 0.57
HDDC3-201ENST00000330334 EMC10Q5UCC4 262 aa18.64■□□□□ 0.57
HDDC3-201ENST00000330334 ISM2Q6H9L7 571 aa18.64■□□□□ 0.57
HDDC3-201ENST00000330334 TMEM92Q6UXU6 159 aa18.64■□□□□ 0.57
HDDC3-201ENST00000330334 TTC30AQ86WT1 665 aa18.64■□□□□ 0.57
HDDC3-201ENST00000330334 NAT16Q8N8M0 369 aa18.64■□□□□ 0.57
HDDC3-201ENST00000330334 OLIG1Q8TAK6 271 aa18.64■□□□□ 0.57
HDDC3-201ENST00000330334 BBS2Q9BXC9 721 aa18.64■□□□□ 0.57
HDDC3-201ENST00000330334 DCLK3Q9C098 648 aa18.64■□□□□ 0.57
HDDC3-201ENST00000330334 POLMQ9NP87 494 aaPredicted RBP18.64■□□□□ 0.57
HDDC3-201ENST00000330334 MYO16Q9Y6X6 1858 aa18.64■□□□□ 0.57
HDDC3-201ENST00000330334 MYOFQ9NZM1 2061 aa18.64■□□□□ 0.57
HDDC3-201ENST00000330334 NCOR2Q9Y618 2525 aa18.63■□□□□ 0.57
HDDC3-201ENST00000330334 KIAA1549LQ6ZVL6 1849 aa18.63■□□□□ 0.57
HDDC3-201ENST00000330334 ADAM23O75077 832 aa18.63■□□□□ 0.57
HDDC3-201ENST00000330334 GNA14O95837 355 aa18.63■□□□□ 0.57
HDDC3-201ENST00000330334 ZBED1O96006 694 aa18.63■□□□□ 0.57
HDDC3-201ENST00000330334 PAEPP09466 180 aa18.63■□□□□ 0.57
HDDC3-201ENST00000330334 TYRP14679 529 aa18.63■□□□□ 0.57
HDDC3-201ENST00000330334 CHKAP35790 457 aa18.63■□□□□ 0.57
HDDC3-201ENST00000330334 TKTL1P51854 596 aa18.63■□□□□ 0.57
HDDC3-201ENST00000330334 LIMK1P53667 647 aa18.63■□□□□ 0.57
HDDC3-201ENST00000330334 KDSRQ06136 332 aa18.63■□□□□ 0.57
HDDC3-201ENST00000330334 ANO7Q6IWH7 933 aa18.63■□□□□ 0.57
HDDC3-201ENST00000330334 MDGA1Q8NFP4 955 aa18.63■□□□□ 0.57
HDDC3-201ENST00000330334 NELFBQ8WX92 580 aa18.63■□□□□ 0.57
HDDC3-201ENST00000330334 KCTD13Q8WZ19 329 aa18.63■□□□□ 0.57
HDDC3-201ENST00000330334 HESX1Q9UBX0 185 aa18.63■□□□□ 0.57
HDDC3-201ENST00000330334 FBXO10Q9UK96 956 aa18.63■□□□□ 0.57
HDDC3-201ENST00000330334 NUDT5Q9UKK9 219 aa18.63■□□□□ 0.57
HDDC3-201ENST00000330334 TSPAN16Q9UKR8 245 aa18.63■□□□□ 0.57
HDDC3-201ENST00000330334 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.62■□□□□ 0.57
HDDC3-201ENST00000330334 MDM4O15151 490 aa18.62■□□□□ 0.57
HDDC3-201ENST00000330334 KLKB1P03952 638 aa18.62■□□□□ 0.57
HDDC3-201ENST00000330334 SETSIPP0DME0 302 aa18.62■□□□□ 0.57
HDDC3-201ENST00000330334 HNRNPLP14866 589 aaKnown RBP eCLIP18.62■□□□□ 0.57
HDDC3-201ENST00000330334 MARSP56192 900 aaKnown RBP18.62■□□□□ 0.57
HDDC3-201ENST00000330334 YWHAGP61981 247 aaKnown RBP eCLIP18.62■□□□□ 0.57
HDDC3-201ENST00000330334 PDE4CQ08493 712 aa18.62■□□□□ 0.57
HDDC3-201ENST00000330334 BST2Q10589 180 aaKnown RBP18.62■□□□□ 0.57
HDDC3-201ENST00000330334 CCDC40Q4G0X9 1142 aa18.62■□□□□ 0.57
HDDC3-201ENST00000330334 PKDCCQ504Y2 493 aa18.62■□□□□ 0.57
HDDC3-201ENST00000330334 GRAMD4Q6IC98 578 aa18.62■□□□□ 0.57
HDDC3-201ENST00000330334 MIB1Q86YT6 1006 aa18.62■□□□□ 0.57
HDDC3-201ENST00000330334 SCML4Q8N228 414 aa18.62■□□□□ 0.57
HDDC3-201ENST00000330334 LMO3Q8TAP4 145 aa18.62■□□□□ 0.57
HDDC3-201ENST00000330334 NT5C1BQ96P26 610 aa18.62■□□□□ 0.57
HDDC3-201ENST00000330334 VPS45Q9NRW7 570 aa18.62■□□□□ 0.57
HDDC3-201ENST00000330334 DNAJC17Q9NVM6 304 aaKnown RBP18.62■□□□□ 0.57
HDDC3-201ENST00000330334 STRIP2Q9ULQ0 834 aa18.62■□□□□ 0.57
HDDC3-201ENST00000330334 NEDD8-MDP1E9PL57 170 aa18.61■□□□□ 0.57
HDDC3-201ENST00000330334 O00370 1275 aa18.61■□□□□ 0.57
HDDC3-201ENST00000330334 DCLK1O15075 740 aa18.61■□□□□ 0.57
HDDC3-201ENST00000330334 GADD45BO75293 160 aaPredicted RBP18.61■□□□□ 0.57
HDDC3-201ENST00000330334 CISD3P0C7P0 127 aa18.61■□□□□ 0.57
HDDC3-201ENST00000330334 MPLP40238 635 aa18.61■□□□□ 0.57
HDDC3-201ENST00000330334 BYSLQ13895 437 aaKnown RBP18.61■□□□□ 0.57
HDDC3-201ENST00000330334 GOLGA7BQ2TAP0 167 aa18.61■□□□□ 0.57
HDDC3-201ENST00000330334 C10orf76Q5T2E6 689 aa18.61■□□□□ 0.57
HDDC3-201ENST00000330334 PMS2CLQ68D20 193 aa18.61■□□□□ 0.57
HDDC3-201ENST00000330334 KLHL10Q6JEL2 608 aa18.61■□□□□ 0.57
HDDC3-201ENST00000330334 LCLAT1Q6UWP7 414 aa18.61■□□□□ 0.57
HDDC3-201ENST00000330334 TPGS1Q6ZTW0 290 aa18.61■□□□□ 0.57
HDDC3-201ENST00000330334 TRIM59Q8IWR1 403 aa18.61■□□□□ 0.57
HDDC3-201ENST00000330334 ZNF513Q8N8E2 541 aaPredicted RBP18.61■□□□□ 0.57
HDDC3-201ENST00000330334 TRIML1Q8N9V2 468 aa18.61■□□□□ 0.57
HDDC3-201ENST00000330334 LRRC4Q9HBW1 653 aa18.61■□□□□ 0.57
HDDC3-201ENST00000330334 OLA1Q9NTK5 396 aaKnown RBP18.61■□□□□ 0.57
HDDC3-201ENST00000330334 MARCH2Q9P0N8 246 aa18.61■□□□□ 0.57
HDDC3-201ENST00000330334 HCN2Q9UL51 889 aa18.61■□□□□ 0.57
HDDC3-201ENST00000330334 EML5Q05BV3 1969 aa18.61■□□□□ 0.57
HDDC3-201ENST00000330334 MED19A0JLT2 244 aaPredicted RBP18.6■□□□□ 0.57
HDDC3-201ENST00000330334 BCLAF3A2AJT9 711 aaKnown RBP18.6■□□□□ 0.57
HDDC3-201ENST00000330334 PENKP01210 267 aaPredicted RBP18.6■□□□□ 0.57
HDDC3-201ENST00000330334 CD19P15391 556 aa18.6■□□□□ 0.57
HDDC3-201ENST00000330334 NTSR1P30989 418 aa18.6■□□□□ 0.57
HDDC3-201ENST00000330334 P2RY2P41231 377 aa18.6■□□□□ 0.57
HDDC3-201ENST00000330334 GCNT1Q02742 428 aa18.6■□□□□ 0.57
HDDC3-201ENST00000330334 EFEMP1Q12805 493 aa18.6■□□□□ 0.57
HDDC3-201ENST00000330334 LRMPQ12912 555 aa18.6■□□□□ 0.57
HDDC3-201ENST00000330334 PAK1Q13153 545 aa18.6■□□□□ 0.57
HDDC3-201ENST00000330334 STILQ15468 1287 aa18.6■□□□□ 0.57
HDDC3-201ENST00000330334 CNGA2Q16280 664 aa18.6■□□□□ 0.57
HDDC3-201ENST00000330334 SPDYCQ5MJ68 293 aa18.6■□□□□ 0.57
HDDC3-201ENST00000330334 RSRC2Q7L4I2 434 aaKnown RBP18.6■□□□□ 0.57
HDDC3-201ENST00000330334 BHLHA9Q7RTU4 235 aa18.6■□□□□ 0.57
HDDC3-201ENST00000330334 C12orf50Q8NA57 414 aaPredicted RBP18.6■□□□□ 0.57
HDDC3-201ENST00000330334 DDX1Q92499 740 aaKnown RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms