RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 APBA1Q02410 837 aa28.94■■■□□ 2.22
ATPAF1-201ENST00000329231 MEA1Q16626 185 aa28.94■■■□□ 2.22
ATPAF1-201ENST00000329231 PREPLQ4J6C6 727 aaPredicted RBP28.94■■■□□ 2.22
ATPAF1-201ENST00000329231 MIIPQ5JXC2 388 aa28.94■■■□□ 2.22
ATPAF1-201ENST00000329231 BSPRYQ5W0U4 402 aa28.94■■■□□ 2.22
ATPAF1-201ENST00000329231 SASS6Q6UVJ0 657 aa28.94■■■□□ 2.22
ATPAF1-201ENST00000329231 Q6ZNB5 142 aa28.94■■■□□ 2.22
ATPAF1-201ENST00000329231 C12orf40Q86WS4 652 aa28.94■■■□□ 2.22
ATPAF1-201ENST00000329231 RNF139Q8WU17 664 aa28.94■■■□□ 2.22
ATPAF1-201ENST00000329231 ACDQ96AP0 544 aa28.94■■■□□ 2.22
ATPAF1-201ENST00000329231 DCLK3Q9C098 648 aa28.94■■■□□ 2.22
ATPAF1-201ENST00000329231 MYO15AQ9UKN7 3530 aa28.94■■■□□ 2.22
ATPAF1-201ENST00000329231 YJEFN3A6XGL0 299 aa28.93■■■□□ 2.22
ATPAF1-201ENST00000329231 E7ENQ6 273 aa28.93■■■□□ 2.22
ATPAF1-201ENST00000329231 K7EQS6 105 aa28.93■■■□□ 2.22
ATPAF1-201ENST00000329231 LETM1O95202 739 aaPredicted RBP28.93■■■□□ 2.22
ATPAF1-201ENST00000329231 GNA15P30679 374 aa28.93■■■□□ 2.22
ATPAF1-201ENST00000329231 USP8P40818 1118 aa28.93■■■□□ 2.22
ATPAF1-201ENST00000329231 DAOAP59103 153 aa28.93■■■□□ 2.22
ATPAF1-201ENST00000329231 TCP11X2Q5H9J9 407 aa28.93■■■□□ 2.22
ATPAF1-201ENST00000329231 LONP2Q86WA8 852 aa28.93■■■□□ 2.22
ATPAF1-201ENST00000329231 IRGQQ8WZA9 623 aa28.93■■■□□ 2.22
ATPAF1-201ENST00000329231 SHC3Q92529 594 aa28.93■■■□□ 2.22
ATPAF1-201ENST00000329231 ARHGEF4Q9NR80 690 aa28.93■■■□□ 2.22
ATPAF1-201ENST00000329231 ABCC13Q9NSE7 274 aa28.93■■■□□ 2.22
ATPAF1-201ENST00000329231 ANO10Q9NW15 660 aa28.93■■■□□ 2.22
ATPAF1-201ENST00000329231 WDR35Q9P2L0 1181 aa28.93■■■□□ 2.22
ATPAF1-201ENST00000329231 VPS13AQ96RL7 3174 aa28.92■■■□□ 2.22
ATPAF1-201ENST00000329231 SLC12A8A0AV02 714 aa28.92■■■□□ 2.22
ATPAF1-201ENST00000329231 PES1O00541 588 aaKnown RBP28.92■■■□□ 2.22
ATPAF1-201ENST00000329231 THAP12O43422 761 aa28.92■■■□□ 2.22
ATPAF1-201ENST00000329231 FBXO21O94952 628 aa28.92■■■□□ 2.22
ATPAF1-201ENST00000329231 KAT7O95251 611 aa28.92■■■□□ 2.22
ATPAF1-201ENST00000329231 GRIA2P42262 883 aa28.92■■■□□ 2.22
ATPAF1-201ENST00000329231 FNTBP49356 437 aa28.92■■■□□ 2.22
ATPAF1-201ENST00000329231 CCDC183Q5T5S1 534 aa28.92■■■□□ 2.22
ATPAF1-201ENST00000329231 ETFBKMTQ8IXQ9 262 aa28.92■■■□□ 2.22
ATPAF1-201ENST00000329231 SUMF1Q8NBK3 374 aa28.92■■■□□ 2.22
ATPAF1-201ENST00000329231 ZNF606Q8WXB4 792 aa28.92■■■□□ 2.22
ATPAF1-201ENST00000329231 SIX2Q9NPC8 291 aa28.92■■■□□ 2.22
ATPAF1-201ENST00000329231 DEC1Q9P2X7 70 aa28.92■■■□□ 2.22
ATPAF1-201ENST00000329231 A0A0A0MRY4 1105 aa28.91■■■□□ 2.22
ATPAF1-201ENST00000329231 BECN2A8MW95 431 aa28.91■■■□□ 2.22
ATPAF1-201ENST00000329231 GABBR2O75899 941 aa28.91■■■□□ 2.22
ATPAF1-201ENST00000329231 HMBSP08397 361 aa28.91■■■□□ 2.22
ATPAF1-201ENST00000329231 GPD2P43304 727 aa28.91■■■□□ 2.22
ATPAF1-201ENST00000329231 HEATR6Q6AI08 1181 aaKnown RBP28.91■■■□□ 2.22
ATPAF1-201ENST00000329231 SYT13Q7L8C5 426 aa28.91■■■□□ 2.22
ATPAF1-201ENST00000329231 NAT16Q8N8M0 369 aa28.91■■■□□ 2.22
ATPAF1-201ENST00000329231 USP33Q8TEY7 942 aa28.91■■■□□ 2.22
ATPAF1-201ENST00000329231 GOLGA1Q92805 767 aa28.91■■■□□ 2.22
ATPAF1-201ENST00000329231 BBS2Q9BXC9 721 aa28.91■■■□□ 2.22
ATPAF1-201ENST00000329231 EPC1Q9H2F5 836 aa28.91■■■□□ 2.22
ATPAF1-201ENST00000329231 MARK1Q9P0L2 795 aa28.91■■■□□ 2.22
ATPAF1-201ENST00000329231 DNAJC12Q9UKB3 198 aa28.91■■■□□ 2.22
ATPAF1-201ENST00000329231 PIK3R2O00459 728 aa28.9■■■□□ 2.22
ATPAF1-201ENST00000329231 KLKB1P03952 638 aa28.9■■■□□ 2.22
ATPAF1-201ENST00000329231 CORO1AP31146 461 aaKnown RBP28.9■■■□□ 2.22
ATPAF1-201ENST00000329231 CNR2P34972 360 aa28.9■■■□□ 2.22
ATPAF1-201ENST00000329231 ACADSBP45954 432 aa28.9■■■□□ 2.22
ATPAF1-201ENST00000329231 SEC13P55735 322 aa28.9■■■□□ 2.22
ATPAF1-201ENST00000329231 KDSRQ06136 332 aa28.9■■■□□ 2.22
ATPAF1-201ENST00000329231 DMWDQ09019 674 aa28.9■■■□□ 2.22
ATPAF1-201ENST00000329231 TPGS1Q6ZTW0 290 aa28.9■■■□□ 2.22
ATPAF1-201ENST00000329231 NUDT18Q6ZVK8 323 aa28.9■■■□□ 2.22
ATPAF1-201ENST00000329231 CAMKK1Q8N5S9 505 aa28.9■■■□□ 2.22
ATPAF1-201ENST00000329231 STK32AQ8WU08 396 aa28.9■■■□□ 2.22
ATPAF1-201ENST00000329231 EDEM1Q92611 657 aa28.9■■■□□ 2.22
ATPAF1-201ENST00000329231 PLD4Q96BZ4 506 aa28.9■■■□□ 2.22
ATPAF1-201ENST00000329231 XPO6Q96QU8 1125 aaKnown RBP28.9■■■□□ 2.22
ATPAF1-201ENST00000329231 ST7Q9NRC1 585 aa28.9■■■□□ 2.22
ATPAF1-201ENST00000329231 USP34Q70CQ2 3546 aa28.89■■■□□ 2.22
ATPAF1-201ENST00000329231 MYOFQ9NZM1 2061 aa28.89■■■□□ 2.22
ATPAF1-201ENST00000329231 NEDD8-MDP1E9PL57 170 aa28.89■■■□□ 2.22
ATPAF1-201ENST00000329231 TULP3O75386 442 aa28.89■■■□□ 2.22
ATPAF1-201ENST00000329231 CHKAP35790 457 aa28.89■■■□□ 2.22
ATPAF1-201ENST00000329231 TNFRSF4P43489 277 aa28.89■■■□□ 2.22
ATPAF1-201ENST00000329231 RPL34P49207 117 aaKnown RBP28.89■■■□□ 2.22
ATPAF1-201ENST00000329231 MRPS21P82921 87 aaKnown RBP28.89■■■□□ 2.22
ATPAF1-201ENST00000329231 STX1AQ16623 288 aa28.89■■■□□ 2.22
ATPAF1-201ENST00000329231 C2orf27AQ580R0 203 aa28.89■■■□□ 2.22
ATPAF1-201ENST00000329231 DENND1BQ6P3S1 775 aa28.89■■■□□ 2.22
ATPAF1-201ENST00000329231 FMNL3Q8IVF7 1028 aa28.89■■■□□ 2.22
ATPAF1-201ENST00000329231 ACP6Q9NPH0 428 aa28.89■■■□□ 2.22
ATPAF1-201ENST00000329231 HBS1LQ9Y450 684 aaKnown RBP28.89■■■□□ 2.22
ATPAF1-201ENST00000329231 CCDC163A0A0D9SF12 145 aa28.88■■■□□ 2.21
ATPAF1-201ENST00000329231 SART1O43290 800 aaKnown RBP28.88■■■□□ 2.21
ATPAF1-201ENST00000329231 TYRP14679 529 aa28.88■■■□□ 2.21
ATPAF1-201ENST00000329231 PTK2Q05397 1052 aa28.88■■■□□ 2.21
ATPAF1-201ENST00000329231 MESP2Q0VG99 397 aa28.88■■■□□ 2.21
ATPAF1-201ENST00000329231 DMC1Q14565 340 aa28.88■■■□□ 2.21
ATPAF1-201ENST00000329231 WDR5BQ86VZ2 330 aa28.88■■■□□ 2.21
ATPAF1-201ENST00000329231 PHTF2Q8N3S3 785 aa28.88■■■□□ 2.21
ATPAF1-201ENST00000329231 MIS12Q9H081 205 aa28.88■■■□□ 2.21
ATPAF1-201ENST00000329231 SMG5Q9UPR3 1016 aaKnown RBP28.88■■■□□ 2.21
ATPAF1-201ENST00000329231 ATG2BQ96BY7 2078 aa28.88■■■□□ 2.21
ATPAF1-201ENST00000329231 RIF1Q5UIP0 2472 aaKnown RBP28.87■■■□□ 2.21
ATPAF1-201ENST00000329231 TBC1D3BA6NDS4 549 aa28.87■■■□□ 2.21
ATPAF1-201ENST00000329231 CACNG3O60359 315 aa28.87■■■□□ 2.21
ATPAF1-201ENST00000329231 LTFP02788 710 aa28.87■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms