RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.41■□□□□ 0.54
EXOSC4-201ENST00000316052 EVLQ9UI08 416 aaPredicted RBP18.41■□□□□ 0.54
EXOSC4-201ENST00000316052 FAM237AA0A1B0GTK4 181 aa18.4■□□□□ 0.54
EXOSC4-201ENST00000316052 PRRT4C9JH25 899 aa18.4■□□□□ 0.54
EXOSC4-201ENST00000316052 CACNG3O60359 315 aa18.4■□□□□ 0.54
EXOSC4-201ENST00000316052 CILPO75339 1184 aa18.4■□□□□ 0.54
EXOSC4-201ENST00000316052 RARGP13631 454 aa18.4■□□□□ 0.54
EXOSC4-201ENST00000316052 CD58P19256 250 aa18.4■□□□□ 0.54
EXOSC4-201ENST00000316052 ITPKAP23677 461 aa18.4■□□□□ 0.54
EXOSC4-201ENST00000316052 NR2F2P24468 414 aa18.4■□□□□ 0.54
EXOSC4-201ENST00000316052 NTSR1P30989 418 aa18.4■□□□□ 0.54
EXOSC4-201ENST00000316052 SYKP43405 635 aa18.4■□□□□ 0.54
EXOSC4-201ENST00000316052 KIF11P52732 1056 aa18.4■□□□□ 0.54
EXOSC4-201ENST00000316052 DPYDQ12882 1025 aa18.4■□□□□ 0.54
EXOSC4-201ENST00000316052 BYSLQ13895 437 aaKnown RBP18.4■□□□□ 0.54
EXOSC4-201ENST00000316052 UAP1L1Q3KQV9 507 aa18.4■□□□□ 0.54
EXOSC4-201ENST00000316052 PREPLQ4J6C6 727 aaPredicted RBP18.4■□□□□ 0.54
EXOSC4-201ENST00000316052 KIAA1211LQ6NV74 962 aa18.4■□□□□ 0.54
EXOSC4-201ENST00000316052 TRMT11Q7Z4G4 463 aaKnown RBP18.4■□□□□ 0.54
EXOSC4-201ENST00000316052 SCD5Q86SK9 330 aa18.4■□□□□ 0.54
EXOSC4-201ENST00000316052 SYT12Q8IV01 421 aa18.4■□□□□ 0.54
EXOSC4-201ENST00000316052 MMRN2Q9H8L6 949 aa18.4■□□□□ 0.54
EXOSC4-201ENST00000316052 MARK1Q9P0L2 795 aa18.4■□□□□ 0.54
EXOSC4-201ENST00000316052 PILRBQ9UKJ0 227 aa18.4■□□□□ 0.54
EXOSC4-201ENST00000316052 SPEGQ15772 3267 aa18.4■□□□□ 0.54
EXOSC4-201ENST00000316052 DMXL2Q8TDJ6 3036 aa18.39■□□□□ 0.54
EXOSC4-201ENST00000316052 CISD3P0C7P0 127 aa18.39■□□□□ 0.53
EXOSC4-201ENST00000316052 HOXB2P14652 356 aa18.39■□□□□ 0.53
EXOSC4-201ENST00000316052 SPDYCQ5MJ68 293 aa18.39■□□□□ 0.53
EXOSC4-201ENST00000316052 PPP1R26Q5T8A7 1209 aaPredicted RBP18.39■□□□□ 0.53
EXOSC4-201ENST00000316052 KLHDC10Q6PID8 442 aa18.39■□□□□ 0.53
EXOSC4-201ENST00000316052 Q6ZNB5 142 aa18.39■□□□□ 0.53
EXOSC4-201ENST00000316052 NUDT18Q6ZVK8 323 aa18.39■□□□□ 0.53
EXOSC4-201ENST00000316052 INTS8Q75QN2 995 aaKnown RBP18.39■□□□□ 0.53
EXOSC4-201ENST00000316052 FAM186BQ8IYM0 893 aa18.39■□□□□ 0.53
EXOSC4-201ENST00000316052 XPO6Q96QU8 1125 aaKnown RBP18.39■□□□□ 0.53
EXOSC4-201ENST00000316052 NIF3L1Q9GZT8 377 aa18.39■□□□□ 0.53
EXOSC4-201ENST00000316052 PNPLA8Q9NP80 782 aa18.39■□□□□ 0.53
EXOSC4-201ENST00000316052 CALCOCO1Q9P1Z2 691 aa18.39■□□□□ 0.53
EXOSC4-201ENST00000316052 WDR35Q9P2L0 1181 aa18.39■□□□□ 0.53
EXOSC4-201ENST00000316052 DNMT3LQ9UJW3 386 aa18.39■□□□□ 0.53
EXOSC4-201ENST00000316052 WASF3Q9UPY6 502 aa18.39■□□□□ 0.53
EXOSC4-201ENST00000316052 PCDHA5Q9Y5H7 936 aa18.39■□□□□ 0.53
EXOSC4-201ENST00000316052 ATXN2Q99700 1313 aaKnown RBP18.39■□□□□ 0.53
EXOSC4-201ENST00000316052 KNL1Q8NG31 2342 aa18.39■□□□□ 0.53
EXOSC4-201ENST00000316052 KLKB1P03952 638 aa18.38■□□□□ 0.53
EXOSC4-201ENST00000316052 CSRP1P21291 193 aaKnown RBP18.38■□□□□ 0.53
EXOSC4-201ENST00000316052 PLA2G4AP47712 749 aa18.38■□□□□ 0.53
EXOSC4-201ENST00000316052 MCCD1P59942 119 aaPredicted RBP18.38■□□□□ 0.53
EXOSC4-201ENST00000316052 ZNF252P-AS1Q0IIN9 211 aa18.38■□□□□ 0.53
EXOSC4-201ENST00000316052 ADAM9Q13443 819 aa18.38■□□□□ 0.53
EXOSC4-201ENST00000316052 C10orf120Q5SQS8 335 aa18.38■□□□□ 0.53
EXOSC4-201ENST00000316052 LYSMD4Q5XG99 296 aa18.38■□□□□ 0.53
EXOSC4-201ENST00000316052 SEMA4DQ92854 862 aa18.38■□□□□ 0.53
EXOSC4-201ENST00000316052 BHMTQ93088 406 aa18.38■□□□□ 0.53
EXOSC4-201ENST00000316052 NUSAP1Q9BXS6 441 aaKnown RBP18.38■□□□□ 0.53
EXOSC4-201ENST00000316052 DUSP16Q9BY84 665 aa18.38■□□□□ 0.53
EXOSC4-201ENST00000316052 IMPG2Q9BZV3 1241 aa18.38■□□□□ 0.53
EXOSC4-201ENST00000316052 FSCN3Q9NQT6 498 aa18.38■□□□□ 0.53
EXOSC4-201ENST00000316052 PLK2Q9NYY3 685 aa18.38■□□□□ 0.53
EXOSC4-201ENST00000316052 NAGPAQ9UK23 515 aa18.38■□□□□ 0.53
EXOSC4-201ENST00000316052 LSM7Q9UK45 103 aaKnown RBP18.38■□□□□ 0.53
EXOSC4-201ENST00000316052 USP3Q9Y6I4 520 aa18.38■□□□□ 0.53
EXOSC4-201ENST00000316052 WASH3PC4AMC7 463 aa18.37■□□□□ 0.53
EXOSC4-201ENST00000316052 STC2O76061 302 aa18.37■□□□□ 0.53
EXOSC4-201ENST00000316052 KIF20AO95235 890 aa18.37■□□□□ 0.53
EXOSC4-201ENST00000316052 TOP3BO95985 862 aaKnown RBP18.37■□□□□ 0.53
EXOSC4-201ENST00000316052 KRT13P13646 458 aa18.37■□□□□ 0.53
EXOSC4-201ENST00000316052 CEACAM1P13688 526 aa18.37■□□□□ 0.53
EXOSC4-201ENST00000316052 ENGP17813 658 aa18.37■□□□□ 0.53
EXOSC4-201ENST00000316052 NDUFV2P19404 249 aa18.37■□□□□ 0.53
EXOSC4-201ENST00000316052 PSMC2P35998 433 aaKnown RBP18.37■□□□□ 0.53
EXOSC4-201ENST00000316052 MAPK8P45983 427 aa18.37■□□□□ 0.53
EXOSC4-201ENST00000316052 KRT85P78386 507 aa18.37■□□□□ 0.53
EXOSC4-201ENST00000316052 RPL6Q02878 288 aaKnown RBP18.37■□□□□ 0.53
EXOSC4-201ENST00000316052 GOLGA8FQ08AF8 430 aa18.37■□□□□ 0.53
EXOSC4-201ENST00000316052 GOLGA8DPQ0D2H9 430 aa18.37■□□□□ 0.53
EXOSC4-201ENST00000316052 LMAN2Q12907 356 aa18.37■□□□□ 0.53
EXOSC4-201ENST00000316052 ZCWPW2Q504Y3 356 aa18.37■□□□□ 0.53
EXOSC4-201ENST00000316052 ZNF394Q53GI3 561 aa18.37■□□□□ 0.53
EXOSC4-201ENST00000316052 PEAR1Q5VY43 1037 aaPredicted RBP18.37■□□□□ 0.53
EXOSC4-201ENST00000316052 SLC23A3Q6PIS1 610 aa18.37■□□□□ 0.53
EXOSC4-201ENST00000316052 CCDC186Q7Z3E2 898 aa18.37■□□□□ 0.53
EXOSC4-201ENST00000316052 CHPFQ8IZ52 775 aa18.37■□□□□ 0.53
EXOSC4-201ENST00000316052 GUF1Q8N442 669 aaKnown RBP18.37■□□□□ 0.53
EXOSC4-201ENST00000316052 DEFB124Q8NES8 71 aa18.37■□□□□ 0.53
EXOSC4-201ENST00000316052 IPO4Q8TEX9 1081 aaKnown RBP18.37■□□□□ 0.53
EXOSC4-201ENST00000316052 EEF2KMTQ96G04 330 aa18.37■□□□□ 0.53
EXOSC4-201ENST00000316052 GABRG3Q99928 467 aa18.37■□□□□ 0.53
EXOSC4-201ENST00000316052 SLC6A17Q9H1V8 727 aa18.37■□□□□ 0.53
EXOSC4-201ENST00000316052 GOLPH3LQ9H4A5 285 aa18.37■□□□□ 0.53
EXOSC4-201ENST00000316052 FBXO10Q9UK96 956 aa18.37■□□□□ 0.53
EXOSC4-201ENST00000316052 RAD54BQ9Y620 910 aa18.37■□□□□ 0.53
EXOSC4-201ENST00000316052 IGHV1OR15-9A0A0B4J2B8 117 aa18.36■□□□□ 0.53
EXOSC4-201ENST00000316052 AP5Z1O43299 807 aa18.36■□□□□ 0.53
EXOSC4-201ENST00000316052 TRIM21P19474 475 aaKnown RBP18.36■□□□□ 0.53
EXOSC4-201ENST00000316052 SPINK2P20155 84 aa18.36■□□□□ 0.53
EXOSC4-201ENST00000316052 RPL13P26373 211 aaKnown RBP18.36■□□□□ 0.53
EXOSC4-201ENST00000316052 DGKGP49619 791 aa18.36■□□□□ 0.53
EXOSC4-201ENST00000316052 ENPEPQ07075 957 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms