RNA–Protein interactions for RNA: ENST00000286307.5

LSM11-201, Transcript of LSM11, U7 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM11, Length 6,584 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11-201ENST00000286307 DEFB106AQ8N104 65 aa19.85■□□□□ 0.77
LSM11-201ENST00000286307 C4orf33Q8N1A6 199 aa19.85■□□□□ 0.77
LSM11-201ENST00000286307 ULBP1Q9BZM6 244 aa19.85■□□□□ 0.77
LSM11-201ENST00000286307 SERPINF2P08697 491 aa19.85■□□□□ 0.77
LSM11-201ENST00000286307 RRM1P23921 792 aa19.85■□□□□ 0.77
LSM11-201ENST00000286307 C1orf146Q5VVC0 180 aa19.85■□□□□ 0.77
LSM11-201ENST00000286307 TKTL2Q9H0I9 626 aa19.85■□□□□ 0.77
LSM11-201ENST00000286307 ING2Q9H160 280 aa19.85■□□□□ 0.77
LSM11-201ENST00000286307 ECT2Q9H8V3 914 aa19.85■□□□□ 0.77
LSM11-201ENST00000286307 ABCC13Q9NSE7 274 aa19.85■□□□□ 0.77
LSM11-201ENST00000286307 CA12O43570 354 aa19.85■□□□□ 0.77
LSM11-201ENST00000286307 GLRA2P23416 452 aa19.85■□□□□ 0.77
LSM11-201ENST00000286307 SHROOM1Q2M3G4 852 aaPredicted RBP19.85■□□□□ 0.77
LSM11-201ENST00000286307 MTSS1LQ765P7 747 aa19.85■□□□□ 0.77
LSM11-201ENST00000286307 PRPF18Q99633 342 aaKnown RBP19.85■□□□□ 0.77
LSM11-201ENST00000286307 C17orf80Q9BSJ5 609 aa19.85■□□□□ 0.77
LSM11-201ENST00000286307 PSMC3IPQ9P2W1 217 aaPredicted RBP19.85■□□□□ 0.77
LSM11-201ENST00000286307 MED1Q15648 1581 aaPredicted RBP19.85■□□□□ 0.77
LSM11-201ENST00000286307 PLA2G6O60733 806 aa19.85■□□□□ 0.77
LSM11-201ENST00000286307 GLP2RO95838 553 aa19.85■□□□□ 0.77
LSM11-201ENST00000286307 HPGDP15428 266 aa19.85■□□□□ 0.77
LSM11-201ENST00000286307 MARSP56192 900 aaKnown RBP19.85■□□□□ 0.77
LSM11-201ENST00000286307 FLCNQ8NFG4 579 aa19.85■□□□□ 0.77
LSM11-201ENST00000286307 MARCOQ9UEW3 520 aaPredicted RBP19.85■□□□□ 0.77
LSM11-201ENST00000286307 TBL1XO60907 577 aa19.84■□□□□ 0.77
LSM11-201ENST00000286307 STAU1O95793 577 aaKnown RBP19.84■□□□□ 0.77
LSM11-201ENST00000286307 LAG3P18627 525 aa19.84■□□□□ 0.77
LSM11-201ENST00000286307 NAT16Q8N8M0 369 aa19.84■□□□□ 0.77
LSM11-201ENST00000286307 CEP19Q96LK0 163 aa19.84■□□□□ 0.77
LSM11-201ENST00000286307 KLF6Q99612 283 aaPredicted RBP19.84■□□□□ 0.77
LSM11-201ENST00000286307 NMRK1Q9NWW6 199 aa19.84■□□□□ 0.77
LSM11-201ENST00000286307 SYCE1LA8MT33 242 aa19.84■□□□□ 0.77
LSM11-201ENST00000286307 PHF20L1A8MW92 1017 aa19.84■□□□□ 0.77
LSM11-201ENST00000286307 PPP2R2AP63151 447 aa19.84■□□□□ 0.77
LSM11-201ENST00000286307 ZFP42Q96MM3 310 aa19.84■□□□□ 0.77
LSM11-201ENST00000286307 PCDHB9Q9Y5E1 797 aa19.84■□□□□ 0.77
LSM11-201ENST00000286307 LRRIQ3A6PVS8 624 aaPredicted RBP19.84■□□□□ 0.77
LSM11-201ENST00000286307 ATP8B1O43520 1251 aa19.84■□□□□ 0.77
LSM11-201ENST00000286307 PLEKP08567 350 aaPredicted RBP19.84■□□□□ 0.77
LSM11-201ENST00000286307 MAGEA4P43358 317 aa19.84■□□□□ 0.77
LSM11-201ENST00000286307 ESRRGP62508 458 aa19.84■□□□□ 0.77
LSM11-201ENST00000286307 MARK2Q7KZI7 788 aaKnown RBP19.84■□□□□ 0.77
LSM11-201ENST00000286307 UTP6Q9NYH9 597 aaKnown RBP19.84■□□□□ 0.77
LSM11-201ENST00000286307 RNF103-CHMP3A0A140T963 221 aa19.84■□□□□ 0.77
LSM11-201ENST00000286307 PLA2G4AP47712 749 aa19.84■□□□□ 0.77
LSM11-201ENST00000286307 C11orf49Q9H6J7 331 aa19.84■□□□□ 0.77
LSM11-201ENST00000286307 SPATA31C2B4DYI2 1134 aa19.84■□□□□ 0.77
LSM11-201ENST00000286307 CSH1P0DML2 217 aa19.84■□□□□ 0.77
LSM11-201ENST00000286307 CSH2P0DML3 217 aa19.84■□□□□ 0.77
LSM11-201ENST00000286307 STX3Q13277 289 aa19.84■□□□□ 0.77
LSM11-201ENST00000286307 DUSP28Q4G0W2 176 aa19.84■□□□□ 0.77
LSM11-201ENST00000286307 IL31RAQ8NI17 732 aa19.84■□□□□ 0.77
LSM11-201ENST00000286307 RSPH1Q8WYR4 309 aa19.84■□□□□ 0.77
LSM11-201ENST00000286307 FKBP9O95302 570 aa19.83■□□□□ 0.77
LSM11-201ENST00000286307 MLNP12872 115 aa19.83■□□□□ 0.77
LSM11-201ENST00000286307 CD44P16070 742 aaKnown RBP19.83■□□□□ 0.77
LSM11-201ENST00000286307 XRCC4Q13426 336 aa19.83■□□□□ 0.77
LSM11-201ENST00000286307 FKBP9P1Q75LS8 142 aa19.83■□□□□ 0.77
LSM11-201ENST00000286307 MAB21L3Q8N8X9 362 aa19.83■□□□□ 0.77
LSM11-201ENST00000286307 NLNQ9BYT8 704 aa19.83■□□□□ 0.77
LSM11-201ENST00000286307 TBC1D13Q9NVG8 400 aa19.83■□□□□ 0.77
LSM11-201ENST00000286307 RRN3Q9NYV6 651 aa19.83■□□□□ 0.77
LSM11-201ENST00000286307 TFR2Q9UP52 801 aa19.83■□□□□ 0.77
LSM11-201ENST00000286307 RARGP13631 454 aa19.83■□□□□ 0.77
LSM11-201ENST00000286307 BOP1Q14137 746 aaKnown RBP19.83■□□□□ 0.77
LSM11-201ENST00000286307 DLK2Q6UY11 383 aa19.83■□□□□ 0.77
LSM11-201ENST00000286307 FAM105AQ9NUU6 356 aa19.83■□□□□ 0.77
LSM11-201ENST00000286307 SCHIP1Q9P0W5 487 aaPredicted RBP19.83■□□□□ 0.77
LSM11-201ENST00000286307 AURKCQ9UQB9 309 aa19.83■□□□□ 0.77
LSM11-201ENST00000286307 CYTH3O43739 400 aa19.83■□□□□ 0.76
LSM11-201ENST00000286307 MAFO75444 373 aaPredicted RBP19.83■□□□□ 0.76
LSM11-201ENST00000286307 NFICP08651 508 aa19.83■□□□□ 0.76
LSM11-201ENST00000286307 CYP3A4P08684 503 aa19.83■□□□□ 0.76
LSM11-201ENST00000286307 NFIL3Q16649 462 aa19.83■□□□□ 0.76
LSM11-201ENST00000286307 DCLRE1AQ6PJP8 1040 aa19.83■□□□□ 0.76
LSM11-201ENST00000286307 IFNL1Q8IU54 200 aa19.83■□□□□ 0.76
LSM11-201ENST00000286307 CHPFQ8IZ52 775 aa19.83■□□□□ 0.76
LSM11-201ENST00000286307 SHCBP1LQ9BZQ2 653 aa19.83■□□□□ 0.76
LSM11-201ENST00000286307 KBTBD4Q9NVX7 518 aa19.83■□□□□ 0.76
LSM11-201ENST00000286307 UBA2Q9UBT2 640 aaPredicted RBP19.83■□□□□ 0.76
LSM11-201ENST00000286307 IL1BP01584 269 aa19.83■□□□□ 0.76
LSM11-201ENST00000286307 KRT20P35900 424 aa19.83■□□□□ 0.76
LSM11-201ENST00000286307 OTUD4Q01804 1114 aaKnown RBP19.83■□□□□ 0.76
LSM11-201ENST00000286307 RAP1GAP2Q684P5 730 aa19.83■□□□□ 0.76
LSM11-201ENST00000286307 PKNOX2Q96KN3 472 aa19.83■□□□□ 0.76
LSM11-201ENST00000286307 IRX2Q9BZI1 471 aaPredicted RBP19.83■□□□□ 0.76
LSM11-201ENST00000286307 FOXP2O15409 715 aa19.83■□□□□ 0.76
LSM11-201ENST00000286307 AMD1P17707 334 aa19.83■□□□□ 0.76
LSM11-201ENST00000286307 GABRR2P28476 465 aa19.83■□□□□ 0.76
LSM11-201ENST00000286307 VPS37AQ8NEZ2 397 aa19.83■□□□□ 0.76
LSM11-201ENST00000286307 ZCCHC2Q9C0B9 1178 aaKnown RBP19.83■□□□□ 0.76
LSM11-201ENST00000286307 SOHLH2Q9NX45 425 aa19.83■□□□□ 0.76
LSM11-201ENST00000286307 RUVBL2Q9Y230 463 aaKnown RBP19.83■□□□□ 0.76
LSM11-201ENST00000286307 GYPCP04921 128 aa19.82■□□□□ 0.76
LSM11-201ENST00000286307 STIP1P31948 543 aaKnown RBP19.82■□□□□ 0.76
LSM11-201ENST00000286307 SYN2Q92777 582 aaPredicted RBP19.82■□□□□ 0.76
LSM11-201ENST00000286307 MYLPFQ96A32 169 aa19.82■□□□□ 0.76
LSM11-201ENST00000286307 MAGED4Q96JG8 741 aa19.82■□□□□ 0.76
LSM11-201ENST00000286307 TMEM134Q9H6X4 195 aa19.82■□□□□ 0.76
LSM11-201ENST00000286307 RIC8BQ9NVN3 520 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms