RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 ZNF518BQ9C0D4 1074 aa16.94■□□□□ 0.3
SH3RF1-201ENST00000284637 IMPAD1Q9NX62 359 aa16.94■□□□□ 0.3
SH3RF1-201ENST00000284637 UBP1Q9NZI7 540 aa16.94■□□□□ 0.3
SH3RF1-201ENST00000284637 DPPA5A6NC42 116 aa16.94■□□□□ 0.3
SH3RF1-201ENST00000284637 ISLR2Q6UXK2 745 aa16.94■□□□□ 0.3
SH3RF1-201ENST00000284637 ABRAQ8N0Z2 381 aa16.94■□□□□ 0.3
SH3RF1-201ENST00000284637 GALNT15Q8N3T1 639 aa16.94■□□□□ 0.3
SH3RF1-201ENST00000284637 ZNF75CPQ92670 426 aaPredicted RBP16.94■□□□□ 0.3
SH3RF1-201ENST00000284637 FAR2Q96K12 515 aa16.94■□□□□ 0.3
SH3RF1-201ENST00000284637 CGRRF1Q99675 332 aa16.94■□□□□ 0.3
SH3RF1-201ENST00000284637 TMEM245Q9H330 911 aa16.94■□□□□ 0.3
SH3RF1-201ENST00000284637 PIF1Q9H611 641 aa16.94■□□□□ 0.3
SH3RF1-201ENST00000284637 INTS13Q9NVM9 706 aa16.94■□□□□ 0.3
SH3RF1-201ENST00000284637 PIH1D1Q9NWS0 290 aaKnown RBP16.94■□□□□ 0.3
SH3RF1-201ENST00000284637 AP4E1Q9UPM8 1137 aa16.94■□□□□ 0.3
SH3RF1-201ENST00000284637 SALL1Q9NSC2 1324 aa16.94■□□□□ 0.3
SH3RF1-201ENST00000284637 CSDE1O75534 798 aaKnown RBP16.94■□□□□ 0.3
SH3RF1-201ENST00000284637 IRF1P10914 325 aa16.94■□□□□ 0.3
SH3RF1-201ENST00000284637 ADRA1DP25100 572 aa16.94■□□□□ 0.3
SH3RF1-201ENST00000284637 MPP3Q13368 585 aa16.94■□□□□ 0.3
SH3RF1-201ENST00000284637 CNGA2Q16280 664 aa16.94■□□□□ 0.3
SH3RF1-201ENST00000284637 PARP6Q2NL67 630 aa16.94■□□□□ 0.3
SH3RF1-201ENST00000284637 AARS2Q5JTZ9 985 aaKnown RBP16.94■□□□□ 0.3
SH3RF1-201ENST00000284637 PLEKHM3Q6ZWE6 761 aa16.94■□□□□ 0.3
SH3RF1-201ENST00000284637 ZCCHC7Q8N3Z6 543 aaKnown RBP16.94■□□□□ 0.3
SH3RF1-201ENST00000284637 KYQ8NBH2 561 aa16.94■□□□□ 0.3
SH3RF1-201ENST00000284637 FOPNLQ96NB1 174 aa16.94■□□□□ 0.3
SH3RF1-201ENST00000284637 DDX50Q9BQ39 737 aaKnown RBP16.94■□□□□ 0.3
SH3RF1-201ENST00000284637 RIOX1Q9H6W3 641 aa16.94■□□□□ 0.3
SH3RF1-201ENST00000284637 RRN3Q9NYV6 651 aa16.94■□□□□ 0.3
SH3RF1-201ENST00000284637 ARIH1Q9Y4X5 557 aaPredicted RBP16.94■□□□□ 0.3
SH3RF1-201ENST00000284637 TCRBV5S4A2TA0A5A2 114 aa16.93■□□□□ 0.3
SH3RF1-201ENST00000284637 LRRC10BA6NIK2 292 aa16.93■□□□□ 0.3
SH3RF1-201ENST00000284637 DGKDQ16760 1214 aa16.93■□□□□ 0.3
SH3RF1-201ENST00000284637 AADACL2Q6P093 401 aa16.93■□□□□ 0.3
SH3RF1-201ENST00000284637 OTOAQ7RTW8 1153 aa16.93■□□□□ 0.3
SH3RF1-201ENST00000284637 CEP41Q9BYV8 373 aa16.93■□□□□ 0.3
SH3RF1-201ENST00000284637 TCF7L2Q9NQB0 619 aa16.93■□□□□ 0.3
SH3RF1-201ENST00000284637 CYLDQ9NQC7 956 aa16.93■□□□□ 0.3
SH3RF1-201ENST00000284637 EURLQ9NYK6 297 aa16.93■□□□□ 0.3
SH3RF1-201ENST00000284637 RNF112Q9ULX5 631 aa16.93■□□□□ 0.3
SH3RF1-201ENST00000284637 RNF103O00237 685 aa16.93■□□□□ 0.3
SH3RF1-201ENST00000284637 TBC1D12O60347 775 aa16.93■□□□□ 0.3
SH3RF1-201ENST00000284637 H2AFYO75367 372 aaKnown RBP16.93■□□□□ 0.3
SH3RF1-201ENST00000284637 ARIH2O95376 493 aa16.93■□□□□ 0.3
SH3RF1-201ENST00000284637 ATP6V1B2P21281 511 aa16.93■□□□□ 0.3
SH3RF1-201ENST00000284637 BMP6P22004 513 aa16.93■□□□□ 0.3
SH3RF1-201ENST00000284637 SOAT1P35610 550 aa16.93■□□□□ 0.3
SH3RF1-201ENST00000284637 CLCN3P51790 818 aa16.93■□□□□ 0.3
SH3RF1-201ENST00000284637 CSHL1Q14406 222 aa16.93■□□□□ 0.3
SH3RF1-201ENST00000284637 HS6ST3Q8IZP7 471 aa16.93■□□□□ 0.3
SH3RF1-201ENST00000284637 VPS37AQ8NEZ2 397 aa16.93■□□□□ 0.3
SH3RF1-201ENST00000284637 CHST7Q9NS84 486 aa16.93■□□□□ 0.3
SH3RF1-201ENST00000284637 MYRFQ9Y2G1 1151 aa16.93■□□□□ 0.3
SH3RF1-201ENST00000284637 PCDHA3Q9Y5H8 950 aa16.93■□□□□ 0.3
SH3RF1-201ENST00000284637 PRR23D1E9PI22 279 aaPredicted RBP16.93■□□□□ 0.3
SH3RF1-201ENST00000284637 STX7O15400 261 aaKnown RBP16.93■□□□□ 0.3
SH3RF1-201ENST00000284637 MGRN1O60291 552 aa16.93■□□□□ 0.3
SH3RF1-201ENST00000284637 ATP6V1G1O75348 118 aa16.93■□□□□ 0.3
SH3RF1-201ENST00000284637 C6orf222P0C671 652 aaPredicted RBP16.93■□□□□ 0.3
SH3RF1-201ENST00000284637 PRR23D2P0DMB1 279 aaPredicted RBP16.93■□□□□ 0.3
SH3RF1-201ENST00000284637 FBXW4P57775 412 aa16.93■□□□□ 0.3
SH3RF1-201ENST00000284637 DDX39BQ13838 428 aaKnown RBP16.93■□□□□ 0.3
SH3RF1-201ENST00000284637 SLFN11Q7Z7L1 901 aa16.93■□□□□ 0.3
SH3RF1-201ENST00000284637 SRPK1Q96SB4 655 aaKnown RBP16.93■□□□□ 0.3
SH3RF1-201ENST00000284637 DNAJC18Q9H819 358 aa16.93■□□□□ 0.3
SH3RF1-201ENST00000284637 USE1Q9NZ43 259 aa16.93■□□□□ 0.3
SH3RF1-201ENST00000284637 NCKIPSDQ9NZQ3 722 aa16.93■□□□□ 0.3
SH3RF1-201ENST00000284637 STARD13Q9Y3M8 1113 aa16.93■□□□□ 0.3
SH3RF1-201ENST00000284637 KBTBD13C9JR72 458 aa16.93■□□□□ 0.3
SH3RF1-201ENST00000284637 CFAP99D6REC4 459 aa16.93■□□□□ 0.3
SH3RF1-201ENST00000284637 JCHAINP01591 159 aa16.93■□□□□ 0.3
SH3RF1-201ENST00000284637 GEMP55040 296 aa16.93■□□□□ 0.3
SH3RF1-201ENST00000284637 MGAT5BQ3V5L5 792 aa16.93■□□□□ 0.3
SH3RF1-201ENST00000284637 MFSD7Q6UXD7 560 aa16.93■□□□□ 0.3
SH3RF1-201ENST00000284637 BLOC1S4Q9NUP1 217 aa16.93■□□□□ 0.3
SH3RF1-201ENST00000284637 WWOXQ9NZC7 414 aa16.93■□□□□ 0.3
SH3RF1-201ENST00000284637 TRMT6Q9UJA5 497 aaKnown RBP16.93■□□□□ 0.3
SH3RF1-201ENST00000284637 RASSF9O75901 435 aa16.92■□□□□ 0.3
SH3RF1-201ENST00000284637 S100A1P23297 94 aa16.92■□□□□ 0.3
SH3RF1-201ENST00000284637 SLC1A6P48664 564 aa16.92■□□□□ 0.3
SH3RF1-201ENST00000284637 MRNIPQ6NTE8 343 aa16.92■□□□□ 0.3
SH3RF1-201ENST00000284637 ZCCHC23Q6ZST2 131 aa16.92■□□□□ 0.3
SH3RF1-201ENST00000284637 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.92■□□□□ 0.3
SH3RF1-201ENST00000284637 ABHD8Q96I13 439 aa16.92■□□□□ 0.3
SH3RF1-201ENST00000284637 LRMDAQ9H2I8 198 aa16.92■□□□□ 0.3
SH3RF1-201ENST00000284637 IL17RBQ9NRM6 502 aa16.92■□□□□ 0.3
SH3RF1-201ENST00000284637 GPRC5DQ9NZD1 345 aa16.92■□□□□ 0.3
SH3RF1-201ENST00000284637 AFF2P51816 1311 aa16.92■□□□□ 0.3
SH3RF1-201ENST00000284637 LZTS3O60299 673 aaPredicted RBP16.92■□□□□ 0.3
SH3RF1-201ENST00000284637 NAMPTP43490 491 aa16.92■□□□□ 0.3
SH3RF1-201ENST00000284637 CCDC126Q96EE4 140 aa16.92■□□□□ 0.3
SH3RF1-201ENST00000284637 KIAA1683Q9H0B3 1180 aa16.92■□□□□ 0.3
SH3RF1-201ENST00000284637 RERGLQ9H628 205 aa16.92■□□□□ 0.3
SH3RF1-201ENST00000284637 SLC38A7Q9NVC3 462 aa16.92■□□□□ 0.3
SH3RF1-201ENST00000284637 DNPEPQ9ULA0 475 aa16.92■□□□□ 0.3
SH3RF1-201ENST00000284637 SHBGP04278 402 aa16.92■□□□□ 0.3
SH3RF1-201ENST00000284637 VAV1P15498 845 aa16.92■□□□□ 0.3
SH3RF1-201ENST00000284637 CNTFP26441 200 aa16.92■□□□□ 0.3
SH3RF1-201ENST00000284637 RNF220Q5VTB9 566 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms