RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 AGO2Q9UKV8 859 aaKnown RBP11.42□□□□□ -0.58
MSH6-201ENST00000234420 MYRFQ9Y2G1 1151 aa11.42□□□□□ -0.58
MSH6-201ENST00000234420 TLL1O43897 1013 aa11.42□□□□□ -0.58
MSH6-201ENST00000234420 PRMT3O60678 531 aa11.42□□□□□ -0.58
MSH6-201ENST00000234420 GTF2H1P32780 548 aa11.42□□□□□ -0.58
MSH6-201ENST00000234420 SLC29A2Q14542 456 aa11.42□□□□□ -0.58
MSH6-201ENST00000234420 KCNT1Q5JUK3 1230 aa11.42□□□□□ -0.58
MSH6-201ENST00000234420 TCHHL1Q5QJ38 904 aaPredicted RBP11.42□□□□□ -0.58
MSH6-201ENST00000234420 PLA2G4FQ68DD2 849 aa11.42□□□□□ -0.58
MSH6-201ENST00000234420 NEK5Q6P3R8 708 aa11.42□□□□□ -0.58
MSH6-201ENST00000234420 BNC2Q6ZN30 1099 aaPredicted RBP11.42□□□□□ -0.58
MSH6-201ENST00000234420 ATP6V1C2Q8NEY4 427 aa11.42□□□□□ -0.58
MSH6-201ENST00000234420 IP6K2Q9UHH9 426 aa11.42□□□□□ -0.58
MSH6-201ENST00000234420 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.41□□□□□ -0.58
MSH6-201ENST00000234420 UMPSP11172 480 aa11.41□□□□□ -0.58
MSH6-201ENST00000234420 WARSP23381 471 aaKnown RBP11.41□□□□□ -0.58
MSH6-201ENST00000234420 PRDX5P30044 214 aa11.41□□□□□ -0.58
MSH6-201ENST00000234420 SEC13P55735 322 aa11.41□□□□□ -0.58
MSH6-201ENST00000234420 ROR2Q01974 943 aaKnown RBP11.41□□□□□ -0.58
MSH6-201ENST00000234420 KCNH2Q12809 1159 aa11.41□□□□□ -0.58
MSH6-201ENST00000234420 DGCR6Q14129 220 aa11.41□□□□□ -0.58
MSH6-201ENST00000234420 MZT2BQ6NZ67 158 aa11.41□□□□□ -0.58
MSH6-201ENST00000234420 MTDHQ86UE4 582 aaKnown RBP11.41□□□□□ -0.58
MSH6-201ENST00000234420 NLRP10Q86W26 655 aa11.41□□□□□ -0.58
MSH6-201ENST00000234420 C3orf20Q8ND61 904 aa11.41□□□□□ -0.58
MSH6-201ENST00000234420 POTECB2RU33 542 aa11.41□□□□□ -0.58
MSH6-201ENST00000234420 RAD51CO43502 376 aa11.41□□□□□ -0.58
MSH6-201ENST00000234420 PLOD3O60568 738 aa11.41□□□□□ -0.58
MSH6-201ENST00000234420 PSIP1O75475 530 aaKnown RBP11.41□□□□□ -0.58
MSH6-201ENST00000234420 RGS2P41220 211 aa11.41□□□□□ -0.58
MSH6-201ENST00000234420 PRCPP42785 496 aa11.41□□□□□ -0.58
MSH6-201ENST00000234420 RHAGQ02094 409 aa11.41□□□□□ -0.58
MSH6-201ENST00000234420 ASAP3Q8TDY4 903 aa11.41□□□□□ -0.58
MSH6-201ENST00000234420 AP3D1O14617 1153 aa11.41□□□□□ -0.58
MSH6-201ENST00000234420 IFNA16P05015 189 aa11.41□□□□□ -0.58
MSH6-201ENST00000234420 TMEM35BQ8NCS4 154 aa11.41□□□□□ -0.58
MSH6-201ENST00000234420 CSDE1O75534 798 aaKnown RBP11.41□□□□□ -0.58
MSH6-201ENST00000234420 MAP3K6O95382 1288 aa11.41□□□□□ -0.58
MSH6-201ENST00000234420 MMP1P03956 469 aa11.41□□□□□ -0.58
MSH6-201ENST00000234420 SFNP31947 248 aa11.41□□□□□ -0.58
MSH6-201ENST00000234420 PRIM2P49643 509 aa11.41□□□□□ -0.58
MSH6-201ENST00000234420 CLK2P49760 499 aaKnown RBP11.41□□□□□ -0.58
MSH6-201ENST00000234420 VAMP7P51809 220 aa11.41□□□□□ -0.58
MSH6-201ENST00000234420 GTF2A2P52657 109 aa11.41□□□□□ -0.58
MSH6-201ENST00000234420 CEBPGP53567 150 aa11.41□□□□□ -0.58
MSH6-201ENST00000234420 SCRN3Q0VDG4 424 aa11.41□□□□□ -0.58
MSH6-201ENST00000234420 STX5Q13190 355 aa11.41□□□□□ -0.58
MSH6-201ENST00000234420 PLD1Q13393 1074 aa11.41□□□□□ -0.58
MSH6-201ENST00000234420 DGKZQ13574 1117 aa11.41□□□□□ -0.58
MSH6-201ENST00000234420 GOLGA7BQ2TAP0 167 aa11.41□□□□□ -0.58
MSH6-201ENST00000234420 TTC39BQ5VTQ0 682 aaPredicted RBP11.41□□□□□ -0.58
MSH6-201ENST00000234420 IQSEC1Q6DN90 963 aa11.41□□□□□ -0.58
MSH6-201ENST00000234420 ZNHIT2Q9UHR6 403 aa11.41□□□□□ -0.58
MSH6-201ENST00000234420 PSMD11O00231 422 aa11.41□□□□□ -0.58
MSH6-201ENST00000234420 ZNF682O95780 498 aa11.41□□□□□ -0.58
MSH6-201ENST00000234420 CALB1P05937 261 aa11.41□□□□□ -0.58
MSH6-201ENST00000234420 EML3Q32P44 896 aa11.41□□□□□ -0.58
MSH6-201ENST00000234420 MMGT1Q8N4V1 131 aa11.41□□□□□ -0.58
MSH6-201ENST00000234420 PTPRHQ9HD43 1115 aa11.41□□□□□ -0.58
MSH6-201ENST00000234420 EVA1BQ9NVM1 165 aa11.41□□□□□ -0.58
MSH6-201ENST00000234420 CLIC5Q9NZA1 410 aa11.41□□□□□ -0.58
MSH6-201ENST00000234420 ETS2P15036 469 aa11.41□□□□□ -0.58
MSH6-201ENST00000234420 FNTAP49354 379 aa11.41□□□□□ -0.58
MSH6-201ENST00000234420 KCNMA1Q12791 1236 aa11.41□□□□□ -0.58
MSH6-201ENST00000234420 MROH9Q5TGP6 573 aa11.41□□□□□ -0.58
MSH6-201ENST00000234420 MTSS1LQ765P7 747 aa11.41□□□□□ -0.58
MSH6-201ENST00000234420 AKAP14Q86UN6 197 aa11.41□□□□□ -0.58
MSH6-201ENST00000234420 DHX40Q8IX18 779 aaKnown RBP11.41□□□□□ -0.58
MSH6-201ENST00000234420 TRPC4APQ8TEL6 797 aa11.41□□□□□ -0.58
MSH6-201ENST00000234420 USP13Q92995 863 aaPredicted RBP11.41□□□□□ -0.58
MSH6-201ENST00000234420 LENG1Q96BZ8 264 aaPredicted RBP11.41□□□□□ -0.58
MSH6-201ENST00000234420 FAM118BQ9BPY3 351 aa11.41□□□□□ -0.58
MSH6-201ENST00000234420 CARD14Q9BXL6 1004 aa11.41□□□□□ -0.58
MSH6-201ENST00000234420 CELF4Q9BZC1 486 aaKnown RBP11.41□□□□□ -0.58
MSH6-201ENST00000234420 PCCAP05165 728 aaPredicted RBP11.4□□□□□ -0.58
MSH6-201ENST00000234420 GRK3P35626 688 aa11.4□□□□□ -0.58
MSH6-201ENST00000234420 DRAP1Q14919 205 aaPredicted RBP11.4□□□□□ -0.58
MSH6-201ENST00000234420 CYP51A1Q16850 503 aa11.4□□□□□ -0.58
MSH6-201ENST00000234420 DUOXA2Q1HG44 320 aa11.4□□□□□ -0.58
MSH6-201ENST00000234420 ATP13A5Q4VNC0 1218 aa11.4□□□□□ -0.58
MSH6-201ENST00000234420 C2CD6Q53TS8 623 aa11.4□□□□□ -0.58
MSH6-201ENST00000234420 EFHC1Q5JVL4 640 aa11.4□□□□□ -0.58
MSH6-201ENST00000234420 NT5DC3Q86UY8 548 aa11.4□□□□□ -0.58
MSH6-201ENST00000234420 ARHGEF19Q8IW93 802 aa11.4□□□□□ -0.58
MSH6-201ENST00000234420 SAE1Q9UBE0 346 aaPredicted RBP11.4□□□□□ -0.58
MSH6-201ENST00000234420 PLCL2Q9UPR0 1127 aa11.4□□□□□ -0.58
MSH6-201ENST00000234420 SEPT4O43236 478 aa11.4□□□□□ -0.58
MSH6-201ENST00000234420 BAATQ14032 418 aaPredicted RBP11.4□□□□□ -0.58
MSH6-201ENST00000234420 TBC1D25Q3MII6 688 aa11.4□□□□□ -0.58
MSH6-201ENST00000234420 METTL21CQ5VZV1 264 aa11.4□□□□□ -0.58
MSH6-201ENST00000234420 CDKL3Q8IVW4 592 aaPredicted RBP11.4□□□□□ -0.58
MSH6-201ENST00000234420 EFCAB1Q9HAE3 211 aa11.4□□□□□ -0.58
MSH6-201ENST00000234420 RAB6BQ9NRW1 208 aa11.4□□□□□ -0.58
MSH6-201ENST00000234420 ZSWIM5Q9P217 1185 aa11.4□□□□□ -0.58
MSH6-201ENST00000234420 PFDN2Q9UHV9 154 aa11.4□□□□□ -0.58
MSH6-201ENST00000234420 DUOX2Q9NRD8 1548 aa11.4□□□□□ -0.58
MSH6-201ENST00000234420 TOP3BO95985 862 aaKnown RBP11.4□□□□□ -0.58
MSH6-201ENST00000234420 AMHP03971 560 aa11.4□□□□□ -0.58
MSH6-201ENST00000234420 RESTQ13127 1097 aa11.4□□□□□ -0.58
MSH6-201ENST00000234420 MPP2Q14168 576 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms