RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 ST3GAL1Q11201 340 aa8.45□□□□□ -1.06
APOB-201ENST00000233242 LPIN1Q14693 890 aa8.45□□□□□ -1.06
APOB-201ENST00000233242 LACTB2Q53H82 288 aaPredicted RBP8.45□□□□□ -1.06
APOB-201ENST00000233242 ARMCX6Q7L4S7 300 aa8.45□□□□□ -1.06
APOB-201ENST00000233242 SCN4BQ8IWT1 228 aa8.45□□□□□ -1.06
APOB-201ENST00000233242 TSEN2Q8NCE0 465 aaKnown RBP8.45□□□□□ -1.06
APOB-201ENST00000233242 TFR2Q9UP52 801 aa8.45□□□□□ -1.06
APOB-201ENST00000233242 FAM20BO75063 409 aa8.45□□□□□ -1.06
APOB-201ENST00000233242 TSC22D2O75157 780 aa8.45□□□□□ -1.06
APOB-201ENST00000233242 SUPT7LO94864 414 aa8.45□□□□□ -1.06
APOB-201ENST00000233242 PCSK1P29120 753 aa8.45□□□□□ -1.06
APOB-201ENST00000233242 KCNJ2P63252 427 aa8.45□□□□□ -1.06
APOB-201ENST00000233242 BLMHQ13867 455 aa8.45□□□□□ -1.06
APOB-201ENST00000233242 ANGPT1Q15389 498 aa8.45□□□□□ -1.06
APOB-201ENST00000233242 ACAD9Q9H845 621 aa8.45□□□□□ -1.06
APOB-201ENST00000233242 MINPP1Q9UNW1 487 aa8.45□□□□□ -1.06
APOB-201ENST00000233242 BIRC5O15392 142 aa8.45□□□□□ -1.06
APOB-201ENST00000233242 ADCY6O43306 1168 aa8.45□□□□□ -1.06
APOB-201ENST00000233242 CRABP2P29373 138 aa8.45□□□□□ -1.06
APOB-201ENST00000233242 NR2C2P49116 596 aa8.45□□□□□ -1.06
APOB-201ENST00000233242 MAPK11Q15759 364 aa8.45□□□□□ -1.06
APOB-201ENST00000233242 SPOCD1Q6ZMY3 1216 aa8.45□□□□□ -1.06
APOB-201ENST00000233242 ADHFE1Q8IWW8 467 aa8.45□□□□□ -1.06
APOB-201ENST00000233242 SLC38A7Q9NVC3 462 aa8.45□□□□□ -1.06
APOB-201ENST00000233242 RGS20O76081 388 aa8.45□□□□□ -1.06
APOB-201ENST00000233242 GP5P40197 560 aa8.45□□□□□ -1.06
APOB-201ENST00000233242 PDK4Q16654 411 aa8.45□□□□□ -1.06
APOB-201ENST00000233242 SNRNP48Q6IEG0 339 aaKnown RBP8.45□□□□□ -1.06
APOB-201ENST00000233242 ULK2Q8IYT8 1036 aa8.45□□□□□ -1.06
APOB-201ENST00000233242 AGXT2Q9BYV1 514 aa8.45□□□□□ -1.06
APOB-201ENST00000233242 CLK4Q9HAZ1 481 aaKnown RBP8.45□□□□□ -1.06
APOB-201ENST00000233242 EPB41L4AQ9HCS5 686 aaPredicted RBP8.45□□□□□ -1.06
APOB-201ENST00000233242 DDHD2O94830 711 aa8.45□□□□□ -1.06
APOB-201ENST00000233242 ZNF12P17014 697 aa8.45□□□□□ -1.06
APOB-201ENST00000233242 FOXO4P98177 505 aa8.45□□□□□ -1.06
APOB-201ENST00000233242 CYP4A22Q5TCH4 519 aa8.45□□□□□ -1.06
APOB-201ENST00000233242 ZNF544Q6NX49 715 aa8.45□□□□□ -1.06
APOB-201ENST00000233242 SPON2Q9BUD6 331 aa8.45□□□□□ -1.06
APOB-201ENST00000233242 NUAK2Q9H093 628 aa8.45□□□□□ -1.06
APOB-201ENST00000233242 FAM49AQ9H0Q0 323 aaPredicted RBP8.45□□□□□ -1.06
APOB-201ENST00000233242 AFF4Q9UHB7 1163 aaKnown RBP8.45□□□□□ -1.06
APOB-201ENST00000233242 SETBP1Q9Y6X0 1596 aa8.45□□□□□ -1.06
APOB-201ENST00000233242 RECQL5O94762 991 aaPredicted RBP8.45□□□□□ -1.06
APOB-201ENST00000233242 PGAM1P18669 254 aa8.45□□□□□ -1.06
APOB-201ENST00000233242 RAP1GAPP47736 663 aa8.45□□□□□ -1.06
APOB-201ENST00000233242 ZDHHC13Q8IUH4 622 aa8.45□□□□□ -1.06
APOB-201ENST00000233242 SYTL2Q9HCH5 934 aa8.45□□□□□ -1.06
APOB-201ENST00000233242 ADGRA2Q96PE1 1338 aa8.45□□□□□ -1.06
APOB-201ENST00000233242 C2CD2LO14523 706 aa8.45□□□□□ -1.06
APOB-201ENST00000233242 GAS2O43903 313 aaKnown RBP8.45□□□□□ -1.06
APOB-201ENST00000233242 SUSD4Q5VX71 490 aa8.45□□□□□ -1.06
APOB-201ENST00000233242 STRA8Q7Z7C7 330 aa8.45□□□□□ -1.06
APOB-201ENST00000233242 FBXW8Q8N3Y1 598 aa8.45□□□□□ -1.06
APOB-201ENST00000233242 SLC25A41Q8N5S1 370 aa8.45□□□□□ -1.06
APOB-201ENST00000233242 EZH1Q92800 747 aaPredicted RBP8.45□□□□□ -1.06
APOB-201ENST00000233242 OSBPL10Q9BXB5 764 aa8.45□□□□□ -1.06
APOB-201ENST00000233242 AVENQ9NQS1 362 aaPredicted RBP8.45□□□□□ -1.06
APOB-201ENST00000233242 C21orf2O43822 256 aa8.45□□□□□ -1.06
APOB-201ENST00000233242 VAV1P15498 845 aa8.45□□□□□ -1.06
APOB-201ENST00000233242 FASTKQ14296 549 aaKnown RBP8.45□□□□□ -1.06
APOB-201ENST00000233242 TRMT6Q9UJA5 497 aaKnown RBP8.45□□□□□ -1.06
APOB-201ENST00000233242 RNF112Q9ULX5 631 aa8.45□□□□□ -1.06
APOB-201ENST00000233242 PRPF19Q9UMS4 504 aaKnown RBP8.45□□□□□ -1.06
APOB-201ENST00000233242 QRICH2Q9H0J4 1663 aa8.45□□□□□ -1.06
APOB-201ENST00000233242 WARSP23381 471 aaKnown RBP8.45□□□□□ -1.06
APOB-201ENST00000233242 RRP1BQ14684 758 aaKnown RBP8.45□□□□□ -1.06
APOB-201ENST00000233242 PTRHD1Q6GMV3 140 aaKnown RBP8.45□□□□□ -1.06
APOB-201ENST00000233242 IPMKQ8NFU5 416 aa8.45□□□□□ -1.06
APOB-201ENST00000233242 CAPSLQ8WWF8 208 aa8.45□□□□□ -1.06
APOB-201ENST00000233242 MYDGFQ969H8 173 aa8.45□□□□□ -1.06
APOB-201ENST00000233242 TINF2Q9BSI4 451 aa8.45□□□□□ -1.06
APOB-201ENST00000233242 NPR3P17342 541 aa8.44□□□□□ -1.06
APOB-201ENST00000233242 RPL21P46778 160 aaKnown RBP8.44□□□□□ -1.06
APOB-201ENST00000233242 IREB2P48200 963 aaKnown RBP8.44□□□□□ -1.06
APOB-201ENST00000233242 SNAP25P60880 206 aa8.44□□□□□ -1.06
APOB-201ENST00000233242 FAM118BQ9BPY3 351 aa8.44□□□□□ -1.06
APOB-201ENST00000233242 VAV3Q9UKW4 847 aa8.44□□□□□ -1.06
APOB-201ENST00000233242 NDUFAF1Q9Y375 327 aa8.44□□□□□ -1.06
APOB-201ENST00000233242 MPP3Q13368 585 aa8.44□□□□□ -1.06
APOB-201ENST00000233242 MIER2Q8N344 545 aa8.44□□□□□ -1.06
APOB-201ENST00000233242 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.44□□□□□ -1.06
APOB-201ENST00000233242 LRRC4BQ9NT99 713 aa8.44□□□□□ -1.06
APOB-201ENST00000233242 WWOXQ9NZC7 414 aa8.44□□□□□ -1.06
APOB-201ENST00000233242 INPP4BO15327 924 aa8.44□□□□□ -1.06
APOB-201ENST00000233242 ATG7O95352 703 aa8.44□□□□□ -1.06
APOB-201ENST00000233242 ITGA4P13612 1032 aa8.44□□□□□ -1.06
APOB-201ENST00000233242 ANPEPP15144 967 aa8.44□□□□□ -1.06
APOB-201ENST00000233242 TCHHL1Q5QJ38 904 aaPredicted RBP8.44□□□□□ -1.06
APOB-201ENST00000233242 NEK10Q6ZWH5 1172 aa8.44□□□□□ -1.06
APOB-201ENST00000233242 CPVLQ9H3G5 476 aa8.44□□□□□ -1.06
APOB-201ENST00000233242 FAM220BPB1ANY3 271 aa8.44□□□□□ -1.06
APOB-201ENST00000233242 MRASO14807 208 aa8.44□□□□□ -1.06
APOB-201ENST00000233242 EMC2Q15006 297 aa8.44□□□□□ -1.06
APOB-201ENST00000233242 LRRC49Q8IUZ0 686 aa8.44□□□□□ -1.06
APOB-201ENST00000233242 RNF149Q8NC42 400 aa8.44□□□□□ -1.06
APOB-201ENST00000233242 URGCPQ8TCY9 931 aa8.44□□□□□ -1.06
APOB-201ENST00000233242 CDRT15Q96T59 188 aa8.44□□□□□ -1.06
APOB-201ENST00000233242 HDHD2Q9H0R4 259 aa8.44□□□□□ -1.06
APOB-201ENST00000233242 ERAP1Q9NZ08 941 aa8.44□□□□□ -1.06
APOB-201ENST00000233242 NINJ2Q9NZG7 142 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms